| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,905,575 | G→C | 10.5% | G90R (GGC→CGC) | U712_20135 → | Uncharacterized protein yxcD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,905,575 | 0 | G | C | 10.5% | 193.0 / 2.5 | 105 | G90R (GGC→CGC) | U712_20135 | Uncharacterized protein yxcD |
| Reads supporting (aligned to +/- strand): ref base G (48/38); new base C (2/9); total (58/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.48e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 105 total aligned reads displayed.
TGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTAAACTCAGCGG > CP006881/3905439‑3905709 | tGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGTATTGGAATTTGATAAGAAAAAAGGc > 4:269126/1‑139 (MQ=255) aaGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAGAAAAAAGGCt > 6:20447/1‑138 (MQ=255) gCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTtct < 3:13810/139‑1 (MQ=255) tttGGCCTGCACCACAAGCAGCTTATGGCAGATGACATTTCTGATGGAATTATTCTGTTCTTAGTGGAATACCACAATTTCAATCGGGACGTTACCGGCTTTGAATTGAAATTTTATAAGAAAAACGGCTTCTCCGCC‑t < 4:71027/139‑1 (MQ=255) tGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACAACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAAATTGAAAAGAAAAAAGGCTTCTCCGCC‑GTg > 8:218490/1‑139 (MQ=255) ggCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAAGTGAAAATTTATAACATAAAATGCTTCTCCGccgttg > 6:43475/1‑135 (MQ=255) gCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGt > 5:102307/1‑139 (MQ=255) ccTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTGGAATTTCAATTTTATAATAAAAAAGGCTTGTCCGCC‑TTGGtt > 7:254402/1‑139 (MQ=255) ccTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTGGAATTGCAAATTGATAAGAAAAAAGTCATCTCCGccgttgat > 4:214710/1‑133 (MQ=255) gCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGttttt > 5:129183/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAGAAAAAAGGCTTCTCCGCC‑TTTGtttttt > 5:118771/1‑138 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTg > 1:212250/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTg > 7:244327/1‑139 (MQ=255) acactcaggTTTTGTCATATGACATTTCTTAAGGCTTTATTCAGTTCTTCGAGTAATACCACAACTTCAAGCCGGACGTTACCGTCGTTTAATTGCAATTTTATAATAAAAACGGCTTCTCCGCC‑TTGGTTTTTGTCaa < 8:12768/134‑1 (MQ=255) acaAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCaa < 3:119316/139‑1 (MQ=255) caAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTATCCGCC‑TTGGTTTTTTTGAAc > 5:33811/1‑139 (MQ=255) cagcTTATTTAAGATGACATTTCAGAAGGCAATATTCAGTTCTTAGAGAAATACCACAACTTCAATCCGGACTTTACCGTCGTTTAATTGAAATTTTATAATAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAg < 2:94121/139‑1 (MQ=255) agcTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGGTTTTGTCAACGAAGc > 5:96638/1‑139 (MQ=255) gttATGGCAGATGACATTTCAGACGGCATTAATCATTTCTTACATCAATACCAAAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAACAAAAAACGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCag < 6:37103/138‑1 (MQ=255) cTTATGTCATATGACATTTAAGAAGGAATAATTCAGTTATTAGAGTAATACCACAACTTCAATCCGCACGTTACCGGCGTTGAATTGCAATTTGATAAGAAAAAACGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCag < 5:20447/139‑1 (MQ=255) cTTATGTCAGATGAATTTTCAGAAGGCATTATTCCGTTCTTAGAGTAATACCACAACTTCAATCCGGACGTTCCCGTCGTTTAATTGCAATTTGATAAGAAAAACGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCag < 6:33811/139‑1 (MQ=255) ttATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGCATTGCAATTTGATAATAAAAACGGCTTCTGCGCC‑GTGGGTTTTGTGAACGAAGCag > 1:248091/1‑138 (MQ=255) tGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCagaag > 5:22690/1‑138 (MQ=255) aGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAGGGCTTCTCCGCC‑GTGGTTTTTGTCAACGAAGCAGAAGAATa > 1:5447/1‑138 (MQ=255) gATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATAGCACAACTTCAATCCGGACGGTACCGTGGTTGAATTGGAATTTGATTTGTAAAAAGGCTTCTCCGGC‑TGGGTTGTTGTCCTCGAAGCTGAGGAATaa > 7:127714/1‑138 (MQ=255) aTGCCATTTCAGAAGGCATTATTCCGATCTTAGAGGAATCCCACAACTTCAATCCGCACGTTACCGGCGTTGAATTGAAATTTGATAATAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATaaaa < 2:39844/139‑1 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGATTACCACAACTTCAAGCCGGACGTTACCGTCGTTGAATTGCAATTTGAAATGAAAAAAGGATTCTCCGCC‑TTGGTGTTTGTCAACGAAGCAGAATAATaaa > 2:256237/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAAATTGATAATAAAAAATTCTTATACGAC‑TTTGATTTTTTAAACGAAGCAAAAGAATaaa > 2:219687/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAATAAAAAAGGCTTCTCCGCC‑TTGGTTTTTTTCAACGAAGCAGAAGAATaaa > 8:137169/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATaaa > 5:12629/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATaaa > 7:138071/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAACGCTTCTCCGGC‑TTGGTTTTTGTCAACGAAGCAGAAGAATaaa > 4:272811/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTGGAAATGCAATTTGTTAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTGAACGAAGCAGAACAATaaa > 5:12340/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGATCTTAGAGGAATACCACAACTTCAATCCGGACGTAACCGTCGTTTAATTGCAATTTTATAAGAAAAAAGGCTTCTCCGCC‑GTGGTTTTAGTCAACCCAGCATAAGAATaaa > 1:38819/1‑138 (MQ=255) tGAAATTTCAGAAGGCATTATTCCGTTCTTAGAGAAATACCACATCTTCAATCCGGACTTAACCGTCTTTTAATTGCAATTTTATAACAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATaaaa < 6:12340/138‑1 (MQ=255) ttttCCGACGGAATTATTCAGTTCTTAGAGTAAAACCACAAATTCAACCCGGACGTAACCGTCGTTTAATTCCAATTTCAAAAGAAAAACCGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTc < 5:37030/138‑1 (MQ=255) aTTTCATAAGGCATTATTCATTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAACCGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTc < 8:165057/139‑1 (MQ=255) taaGTCATTATTCAGTTATTAGAGGAAAACCAAAACTTCATTCCGGACTTTCCCGTCGTTCAATTGAAATTTGAAAACAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 4:153443/138‑1 (MQ=255) gAATGCATTATTCAGTTCTTAGAGCACTACCACAAATTCAATCCGGACGTTACCGTCGTTTAATTGCAATTTGATAAGAAAAACGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 4:233086/139‑1 (MQ=255) gAAGGCATTTTTCAGTTCTTAGAGCAAAACAACAATTTCAATCCGGACGTTACCGTCGTTTAATTGAAATTTGTTAATAAAAACGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 2:216185/139‑1 (MQ=255) gAAGGCATTATTCCGTTCTTATCGGAATACCACAACTTCAAACCGGACGTTACCGTCGTTGAATTCAAATTTGATAAGAAAAACGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 1:270819/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTTAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 6:12629/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 8:138071/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 8:244327/139‑1 (MQ=255) gAAGGCATTATTCAGTGCTTAGAGGAATACCACAACTTCAATCCGGCCGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 8:269008/139‑1 (MQ=255) gAAGGCATTATTATGTTATTAGAGGAATACCACAACTTCAATCCGGACGTTACCGGCGTTTAATTGAAATTTCATAATAAAAACGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 3:82764/139‑1 (MQ=255) gAAGGAATTATTCAGTTCTTAGAGGAATACCACAACTTAATTCCGGACGTTACCGTCGTTGAATTGCAATTTCTAAAGAAAAAACGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 6:118771/139‑1 (MQ=255) atgaattattCTGTTCTTAGAGCAATACAACAACTTAAATCCGGACGTTACCGTCGTTTAATTCCAATTTCATAACAAAAACCGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 1:235966/133‑1 (MQ=255) attattCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCt > 8:143849/1‑139 (MQ=255) tattCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAATAAAAAAAGCTTATCAGCC‑GTGGATTTTTTATACGCAGCACAAGAATAAAAATATATTAATCAAAACtt > 2:235966/1‑138 (MQ=255) tattCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TGGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTa > 8:199669/1‑139 (MQ=255) aGTTTTTAGAGGAATACAACACATTCAATCCGGACGTTACCGTCGTTGAATTGAAATTTGATAAGAAAAACGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcg < 7:127519/139‑1 (MQ=255) aGTTCTTCGAGCAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAACAAAAACGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcg < 7:127520/139‑1 (MQ=255) gTTATTAGCGCAAAACCACAACTTCAACCCGGACGTAACCGGCGTTTAATTGAAATTTTAAAAAAAAAAACGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgc < 3:961/139‑1 (MQ=255) ttattAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg < 1:80158/136‑1 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg > 8:169631/1‑139 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACCCAGCAGAAGAATTAAAAAGTCTTAATCAAACCTTACTCcgcg > 8:127520/1‑139 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAAATTGATAAGAAAAAAGGCTTCTCCGCC‑GTTGATTTTTTCAAACAAGCACAAGAAAAAAAATTTCATAAACAAAACATACTCcgcg > 8:127519/1‑139 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTGGCATTTCAAATTGATAAGAAAAAAGGCATCTCCGCC‑GTTGGTTTTGTCAACGAAGCAGAAGAATAAAAATTTATTAATGAAACCTTACTGcggg > 1:281672/1‑137 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGGCGTGGAATTGCAATTTGATAAGAAAAAATGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTATTAATCAAAACTTACTCcgcg > 8:213596/1‑139 (MQ=255) agagGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAg > 1:188217/1‑95 (MQ=255) agagGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAACAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAg < 2:188217/95‑1 (MQ=255) agagGAATACCACAACTTCAATCAGGACGTTACCGTCGTTGAAATGAAAATTTATAAAAAAAAATGATACTCCGCC‑TTGGTTATTGTCAACCAAGCAGAAAAATAAAAATGTAATAAACAAAACTTAATCCGCGCggg > 8:209623/1‑138 (MQ=255) agagGAATAACACAACTTCAATCCGGACGTTACCGTCGTGGAATTTCAAAATGATAAGAAAAAAGGCATCTCCGCC‑TTTGTTTTTGTCAACGAACCAGAAGAATAAAAATGTATTAATCAAACCTTACACcgccccgg > 6:151520/1‑133 (MQ=255) acagGAATACCACAACTTCAATCCGGCCGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTGACCCCC‑GTGGTTTTTTTCAACGAATCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCggg > 2:1843/3‑138 (MQ=255) aaaaCCACAACTCCAACCCGTCCGTTACCGTCTTTTAATTGCAATTTGATAACAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt < 1:198979/136‑1 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAGAAAAAATGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCATACTCCGCGCGGGTTAGGt > 5:2733/1‑139 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCATAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt > 8:191454/1‑139 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt < 7:169631/139‑1 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCCCGGGTAAGGt > 3:291104/1‑139 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGGTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAggg > 3:79859/1‑138 (MQ=255) aTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAATATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt < 6:278063/138‑1 (MQ=255) acaACTTCAATCCGGACGTTCCCGTCGTTGAATTCAAATTTTATAAGAAAAACCGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGttttttt < 6:22690/139‑1 (MQ=255) caACTTCAATCCGGACGTTACCGTCGTTTAATTTCAAATTTAAAATAAAAAAAGCTTATGCGCCGTTGGTTTTT‑TGAAAGAACAAGAATAAAAAAAATGTGTTAATAAAAACATAAAACCCCCGGGTTAAGttttttt > 4:150924/1‑138 (MQ=255) caACTTCAATCCGGACGTTACCGTCGTTGCATTGCAATTTGTTAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTTAGGttttttt > 4:271424/1‑138 (MQ=255) caACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATTAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGCAGCAGAAGAATAAAAATGTCTTAATCAAACCATACTCCGCGCGGGTAAGGTTTTTTTa > 7:268391/1‑139 (MQ=255) aaCTTCAATCCGGACGTTCCCGTCGTAGAATTCCAATTTTAAAATAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTaa < 1:56000/139‑1 (MQ=255) cTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 2:88525/104‑1 (MQ=255) cTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc > 1:88525/1‑104 (MQ=255) cTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTAAACGAAGCAGAAGAATAAAAAAGTATTAATAAAACCATACTCCCCGCGGGTAAGGTTTTTTTAATg > 2:28057/1‑139 (MQ=255) cTTCAATCCGGACGTTACCGTCGTTGAATTGCAAATTGATAAGAAAAAAGGCTTCTCCGCC‑ATGGTTTTTGTCAAAGAAGCAGAAGAATAAAAATGTCTTAATAAAACCTTACTACGCGCGGGTAAGGGTTTTTTAAtt > 4:97036/1‑138 (MQ=255) tCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAATGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCag > 2:44078/1‑81 (MQ=255) tCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCag < 1:44078/81‑1 (MQ=255) cAATCCGGACGTTACCGTCGTTGTATTGCAATTTGTGAAGAAAAAACGCTTCTCCGCC‑GAGGGTTTTGTCAACGAAGCAGAAGAATTAAAAAGTCTTAAAAAAAACTTACTACGCGCGGGGAAGGTTTTTTTTATGGtt > 4:287789/1‑139 (MQ=255) cGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTctct < 2:42329/139‑1 (MQ=255) cGGACGTTACCGTCGTTGAATTGCAAATTGATAAGAAAAAAGGCTTCTGCGCC‑GTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAAACAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTctct > 5:222250/1‑139 (MQ=255) gACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTctct > 5:120572/1‑137 (MQ=255) gTTACCGTCGTTGAATTGCAATTTGATAAGAAAAACGGCTTCTCCGCC‑TTGGTATTTGTCAACGAAGCAGAAGAATAAAAATGGCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCa < 8:155817/139‑1 (MQ=255) gTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCa < 7:39608/139‑1 (MQ=255) aCCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGGTTCTCCGCC‑GTGGTTTTTGTGAACGAAGCAGAAGAATAAAAATGTAATAATCAAAACATACTGCGGGCGGGTAATGTTTTTTTAATGGTTTCTATGAGCATa > 7:115894/1‑138 (MQ=255) gAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTc > 6:85389/1‑139 (MQ=255) aTTGAAATTTTAAAAAAAAAACCGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGt < 3:150924/139‑1 (MQ=255) ttGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGtt > 4:282481/1‑139 (MQ=255) aTAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTaaa > 6:177864/1‑138 (MQ=255) tAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTAAACt < 3:282481/139‑1 (MQ=255) gAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTAAACTCAg < 2:212250/139‑1 (MQ=255) aaaaaGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTAAACTCAGCg < 5:57823/139‑1 (MQ=255) aaaaaGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTAAACTCAGCg < 3:112832/139‑1 (MQ=255) aaaaaGGCTTCTCAGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTAAACTCAGCg < 1:219687/139‑1 (MQ=255) aaaaGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTAAACTCAGCgg < 3:97036/139‑1 (MQ=255) | TGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCC‑TTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTAAACTCAGCGG > CP006881/3905439‑3905709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |