| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,101,990 | G→T | 5.0% | L1174I (CTT→ATT) | U712_15925 ← | Dimodular nonribosomal peptide synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,101,990 | 0 | G | T | 5.0% | 276.3 / 3.8 | 80 | L1174I (CTT→ATT) | U712_15925 | Dimodular nonribosomal peptide synthase |
| Reads supporting (aligned to +/- strand): ref base G (46/30); new base T (2/2); total (48/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.11e-01 | |||||||||||
TGCATACTGCACAGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAGTAACATGTAACT > CP006881/3101859‑3102127 | tGCATACTGCACAGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACg > 3:140488/1‑139 (MQ=255)tGCATACTGCACAGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACg > 3:145116/1‑139 (MQ=255) gCATACTGCACAGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACg > 3:5686/1‑138 (MQ=255) cATACTGCACAGCAAGAGGCGCCCATTCGGGAGATCGGCCGGCGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTa < 2:26259/139‑1 (MQ=255) tGCACAGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGCCAAGATGATGGACGAGAAGACGCAGCACGTACTCGt > 6:199601/1‑139 (MQ=255) gctcaGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCAGTCCCCGACATTATGATGGGAGAGAAGAAGCAGCACGTACTcct > 6:223044/4‑136 (MQ=255) gCACAGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGt > 6:286540/1‑138 (MQ=255) gCACAGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGt > 8:66533/1‑138 (MQ=255) gCACAGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGt > 1:172428/1‑138 (MQ=255) gCACAGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTc > 1:187690/1‑139 (MQ=255) gCACAGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACCAGATGAAGCCGCACGTACTCGt > 2:260689/1‑138 (MQ=255) gCACAGCAAGAGGCGCCCATTCGGGAGATCGTACGTGGCAGAGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATAATTTCCTAGAATAAGCAGAACGTACTctt > 7:116565/1‑136 (MQ=255) gagGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGAt > 1:234001/1‑139 (MQ=255) gagGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGAt > 8:119529/1‑139 (MQ=255) gagGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGAt > 1:49365/1‑139 (MQ=255) cGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGc < 7:66533/139‑1 (MQ=255) cGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGGCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGc < 2:234001/139‑1 (MQ=255) cGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAg > 5:75038/1‑139 (MQ=255) cGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAg > 5:248359/1‑139 (MQ=255) gAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGc > 6:17968/1‑139 (MQ=255) ccGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGc < 4:5686/139‑1 (MQ=255) cGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGCAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGc > 7:71209/1‑138 (MQ=255) tAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCATGAAAAGCAGGTTCAGCTGCAAGAt < 4:145116/139‑1 (MQ=255) tAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCATGAAAAGCAGGTTCAGCTGCAAGAt < 4:140488/139‑1 (MQ=255) tAAGCTGTCCCAAGGTCTCTGGGAAGCGGAGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGAt < 3:240387/139‑1 (MQ=255) aGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCa < 2:134048/139‑1 (MQ=255) gCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCaa < 7:159216/139‑1 (MQ=255) gCTGTCCCAAGGGCTCTGGTCAGCTGTGGTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCaa < 8:2233/139‑1 (MQ=255) gTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGc > 7:152618/1‑139 (MQ=255) tCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAg < 6:75038/137‑1 (MQ=255) tCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCt > 6:91627/1‑139 (MQ=255) tCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTGCAGCTGCAAGATCAAAGCt > 2:257121/1‑139 (MQ=255) cccAAGGTCTCTGGTCAGCGGTGTTAAGGACCCGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGGACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCACGGTCAGCTGCAAGCTCAACGCTg > 4:184751/1‑139 (MQ=255) cccAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTg < 7:119529/139‑1 (MQ=255) cccAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTg > 4:49907/1‑139 (MQ=255) tctcTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTa < 1:33740/139‑1 (MQ=255) tctGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTa > 1:243540/1‑137 (MQ=255) cAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGTAGCCGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCg < 1:260689/139‑1 (MQ=255) aGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTa > 7:23876/1‑59 (MQ=255) aGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTa < 8:23876/59‑1 (MQ=255) aGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCgg > 1:165765/1‑139 (MQ=255) gCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGc > 8:222862/1‑139 (MQ=255) cGGTGTTAAGGACCAGCCTTCCCCGACAATATGATTGACGAGAAGAAGCAGCACGTa < 3:259325/57‑1 (MQ=255) cGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTa > 4:259325/1‑57 (MQ=255) cGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGc < 1:41971/108‑1 (MQ=255) cGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGc > 2:41971/1‑108 (MQ=255) cGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGc > 5:174414/1‑138 (MQ=255) ttAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGcc > 7:23338/1‑138 (MQ=255) ttAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGcc > 7:18992/1‑138 (MQ=255) ttAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGcc > 7:187896/1‑138 (MQ=255) cAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGCCCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGa > 5:26136/1‑137 (MQ=255) cAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTg > 8:129021/1‑108 (MQ=255) cAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTg < 7:129021/108‑1 (MQ=255) cAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGa > 5:280718/1‑137 (MQ=255) cAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGa > 8:50621/1‑137 (MQ=255) cAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCGCGGCACCAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGaaa > 8:56039/1‑139 (MQ=255) gCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTa > 8:89568/1‑42 (MQ=255) gCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTa < 7:89568/42‑1 (MQ=255) gCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGc > 5:132151/1‑139 (MQ=255) gCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGc > 5:170342/1‑139 (MQ=255) cGACAATATGATGGACGAGAAGAATCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTg > 4:144413/1‑98 (MQ=255) cGACAATATGATGGACGAGAAGAATCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTg > 4:148949/1‑98 (MQ=255) cGACAATATGATGGACGAGAAGAATCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTg < 3:148949/98‑1 (MQ=255) cGACAATATGATGGACGAGAAGAATCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTg < 3:144413/98‑1 (MQ=255) cAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGc < 2:187690/139‑1 (MQ=255) tatGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAAt > 5:123252/1‑139 (MQ=255) atgGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGTCAAGcc > 7:104039/1‑110 (MQ=255) atgGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGcc < 8:104039/110‑1 (MQ=255) tgGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGa < 3:281034/111‑1 (MQ=255) tgGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGa > 4:281034/1‑111 (MQ=255) tgGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAg > 5:286262/1‑139 (MQ=255) ggACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAg < 8:187896/138‑1 (MQ=255) gACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAGt < 1:167177/138‑1 (MQ=255) gACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAGt < 5:199601/138‑1 (MQ=255) gACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAGt < 1:264478/138‑1 (MQ=255) gACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAGTa < 7:222862/139‑1 (MQ=255) gagaAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTg < 7:90290/82‑1 (MQ=255) gagaAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTg > 8:90290/1‑82 (MQ=255) gaagaaGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAGTAACATg < 8:18992/139‑1 (MQ=255) gaagaaGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAGTAACATg < 8:23338/139‑1 (MQ=255) agcagcACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAGTAACATGTAACt < 8:152618/139‑1 (MQ=255) agcagcACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAGTAACATGTAACt < 6:286262/139‑1 (MQ=255) | TGCATACTGCACAGCAAGAGGCGCCCATTCGGGAGATCGTCCGTGGCAGCGAGCCGCATAAGCTGTCCCAAGGTCTCTGGTCAGCGGTGTTAAGGACCAGCCGTCCCCGACAATATGATGGACGAGAAGAAGCAGCACGTACTCGTCAGGACCGATCACAAAAAGCTCGGCACGAAAAGCAGGTTCAGCTGCAAGATCAAAGCTGTAGCGTACAGCTTCGGCAAGCCGATCAGAAAGCTCCTTCTCAGCAATTTCAGTAACATGTAACT > CP006881/3101859‑3102127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |