Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,996,490	T→C	noncoding (5/1554 nt)	U712_21380 ←	16S ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,996,490	0	T	C	97.4%	182.9 / ‑2.9	79	noncoding (5/1554 nt)	U712_21380	16S ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (40/36);  total (41/38)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ACAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGTACGTTTTGTCT  >  CP006881/2996357‑2996625                                                                                                                                      |                                                                                                                                        aCAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACaaa                                                                                                                                      <  7:261858/137‑1 (MQ=17) aCAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACaaa                                                                                                                                      <  3:153641/137‑1 (MQ=17)  caggcaggTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATg                                                                                                                                    >  6:102342/1‑138 (MQ=17)  caggcaggTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATg                                                                                                                                    >  6:76699/1‑138 (MQ=17)     gcaggTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATc                                                                                                                                <  5:225723/139‑1 (MQ=17)       aggTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCCGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGAGCAAACTGTCCGACAAATGGATca                                                                                                                               >  5:90095/1‑138 (MQ=255)       aggTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATca                                                                                                                               >  3:176113/1‑138 (MQ=17)         gTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCCCCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAg                                                                                                                            >  3:136187/1‑139 (MQ=17)         gTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCCGGATCAACCTCTCCGACAAATGGATCACAg                                                                                                                            >  2:122260/1‑139 (MQ=12)             cccACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGtt                                                                                                                         <  1:211808/138‑1 (MQ=17)             cccACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGtt                                                                                                                         <  2:124890/138‑1 (MQ=17)                aCGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGCGCCAGGATCAAACTCTCCGACAAATGGATCCCAGCTTAAGt                                                                                                                     >  1:159425/1‑139 (MQ=255)                 cGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGt                                                                                                                     >  8:104229/1‑138 (MQ=17)                   tgtTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCa                                                                                                                  >  1:243309/1‑139 (MQ=17)                   tgtTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCa                                                                                                                  >  7:360891/1‑139 (MQ=17)                       aCTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACaaa                                                                                                                                      <  4:128266/115‑1 (MQ=17)                       aCTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACaaa                                                                                                                                      >  3:128266/1‑115 (MQ=17)                        cTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGCCAAATGGATCACAGGTTAAGTTCAcccc                                                                                                              >  2:158098/1‑136 (MQ=12)                           aCCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCAt                                                                                                            <  1:236024/137‑1 (MQ=17)                            ccggTCCGCCGCTAACTTCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGATCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCt                                                                                                         <  6:65097/136‑1 (MQ=255)                            cccGTCCGCCGCTAACATCAGGGAGCATGCTCCCACCTGTCCGCTCGACTTGCTTGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCt                                                                                                         <  1:114476/139‑1 (MQ=12)                             ccGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGATCACCGCATCCt                                                                                                         <  1:257759/138‑1 (MQ=17)                             ccGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCAGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCt                                                                                                         >  2:257759/1‑138 (MQ=17)                                tCCGCCGCTCACATCAGGGAGCAAGCGCCCACCTGTCCGCTCGACTTGCATGTATTCGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAACTGGATCACAGGTTCCGTTCACCGCATCCTgcgg                                                                                                     <  1:205543/139‑1 (MQ=11)                                tCCGCCGCTAACATCAGGGGGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTgcgg                                                                                                     >  1:110877/1‑139 (MQ=17)                                tCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCt                                                                                                         <  3:145299/135‑1 (MQ=17)                                tCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCt                                                                                                         >  4:145299/1‑135 (MQ=17)                                tCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTgcgg                                                                                                     <  2:103268/139‑1 (MQ=17)                                tCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTgcgg                                                                                                     <  1:95500/139‑1 (MQ=17)                                tCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTgcgg                                                                                                     >  4:32250/1‑139 (MQ=17)                                tCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTgcgg                                                                                                     >  5:63500/1‑139 (MQ=17)                                tCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGCATCAAACACTCCGACAAATTGATCACAGCTAAAGTTCACCGCATACTgcgg                                                                                                     >  2:114476/1‑139 (MQ=11)                                tCCGCAGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTgcgg                                                                                                     >  4:37353/1‑139 (MQ=17)                                 ccgccgCTACCAGCAGGGCGCACGCTCCCACCTGTCCGCTCGACTTGCATGTATTCGGCACGCCGCGAGCGAGCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGGAGCCTgcggc                                                                                                    <  4:56601/139‑1 (MQ=11)                                  cgccgcTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTgcggcg                                                                                                   >  1:136138/1‑139 (MQ=17)                                   gccgcTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCTCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGa                                                                                                  <  2:210231/139‑1 (MQ=17)                                   gccgcTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGa                                                                                                  <  4:159219/139‑1 (MQ=17)                                   gccgcTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGa                                                                                                  <  8:310672/139‑1 (MQ=17)                                   gccgcTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGa                                                                                                  <  5:102342/139‑1 (MQ=17)                                   gcagcTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATTTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGAGAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGa                                                                                                  <  3:301990/136‑1 (MQ=12)                                     cgcTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGaca                                                                                                >  1:310051/1‑139 (MQ=17)                                       cTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACAcc                                                                                              >  8:35188/1‑139 (MQ=17)                                       cTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACAcc                                                                                              >  3:315321/1‑139 (MQ=17)                                          acaacaGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCtgt                                                                                           <  4:228923/139‑1 (MQ=17)                                               aGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGAc                                                                                      <  4:315321/139‑1 (MQ=17)                                                    gCAAGCTCCGACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCAGCGCATCCTGCGGCGACACCTGTGTGACCTGcg                                                                                 <  6:181837/139‑1 (MQ=12)                                                    gCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGcg                                                                                 <  4:136187/139‑1 (MQ=17)                                                    gCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGcg                                                                                 <  2:376615/139‑1 (MQ=17)                                                     cAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGcgt                                                                                >  8:65346/1‑139 (MQ=17)                                                      aaGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGcgtc                                                                               >  1:80043/1‑139 (MQ=17)                                                         cTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTg                                                                            <  7:78764/139‑1 (MQ=32)                                                         cTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTg                                                                            <  3:37353/139‑1 (MQ=17)                                                         cTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTg                                                                            <  3:32250/139‑1 (MQ=17)                                                            ccACCTGTCCGCTGGACTTGCTTGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGc                                                                           <  5:249890/137‑1 (MQ=12)                                                            ccACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCa                                                                          <  7:35188/138‑1 (MQ=17)                                                               ccTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGcc                                                                      <  7:104229/139‑1 (MQ=11)                                                                                              gccgccAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGCCACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGc                                       >  7:205553/1‑139 (MQ=17)                                                                                              gccgccAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGTCTACGCACATCGCAGTGc                                       >  1:305070/1‑139 (MQ=17)                                                                                              gccgccAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGc                                       >  4:328219/1‑139 (MQ=17)                                                                                              gccgccAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGc                                       >  1:211643/1‑139 (MQ=17)                                                                                              gccgccAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGc                                       >  3:112670/1‑139 (MQ=17)                                                                                              gccgccAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGc                                       >  3:160110/1‑139 (MQ=17)                                                                                              gccgccAGCGTTCGTCCTGAGCCAGGATCAAACTCACCCATAAATGCATCACAGGTAAAGTTCACCGCATCCTCCGCCGACACCTGAGTGACCAGCGTCGTGCACGCCCTAGTTTGCATGACTACGCACATCGCAGttc                                       >  8:213270/1‑137 (MQ=11)                                                                                              cccgccAGCGTTCGTCCTGAGCCAGGATCAAACTCACCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGAGTGACCTGCGTCGTGCAGGCGCTAGTGTGACTGACTACCCACATCTCAGttc                                       >  4:249028/2‑137 (MQ=11)                                                                                                           gTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTaaaaa                           <  1:363966/138‑1 (MQ=21)                                                                                                           gTCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGGTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTaaaaa                           <  6:165365/138‑1 (MQ=21)                                                                                                            tCCTGAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCAATTTTGACTGACAACGCACATCGCAGTGCGAATTTTAAAAACt                         >  2:363966/1‑139 (MQ=11)                                                                                                                gAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAAt                     >  8:340239/1‑139 (MQ=37)                                                                                                                gAGCCAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAAt                     >  4:157575/1‑139 (MQ=37)                                                                                                                   ccAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTaa                  <  8:375776/139‑1 (MQ=37)                                                                                                                   ccAGGATCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTaa                  <  3:328219/139‑1 (MQ=37)                                                                                                                        aTCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGt             <  7:65346/139‑1 (MQ=37)                                                                                                                        aTCAAACTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGt             <  4:160110/139‑1 (MQ=37)                                                                                                                        aTCAAACTCTCCGACAAATGGAGCACAGGGTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTGTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGt             <  4:6994/139‑1 (MQ=255)                                                                                                                             aCTCTCCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGTACGtt        >  3:102142/1‑139 (MQ=37)                                                                                                                                 tcCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGTACGtgttgt    >  1:110726/1‑139 (MQ=255)                                                                                                                                 tcCGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGTACGTTTTGt    >  6:70212/1‑139 (MQ=37)                                                                                                                                 tcCGACAAATGGATCACAGGTTAAGTTCACAGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCATAGTTTGAATGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGTACGTTTTg     >  6:157576/1‑138 (MQ=255)                                                                                                                                   cGACAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGTACGTTTTGTCt  >  5:106574/1‑139 (MQ=37)                                                                                                                                      |                                                                                                                                        ACAGGCAGGTTACCCACGTGTTACTCACCCGTCCGCCGCTAACATCAGGGAGCAAGCTCCCACCTGTCCGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAGCCAGGATCAAACTCTCCGATAAATGGATCACAGGTTAAGTTCACCGCATCCTGCGGCGACACCTGTGTGACCTGCGTCGTGCAGGCCCTAGTTTGACTGACTACGCACATCGCAGTGCGATTTTTAAAAACTGAATTAACAGGTACGTTTTGTCT  >  CP006881/2996357‑2996625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑