| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 3,617,854 | A→G | M113T (ATG→ACG) | U712_18650 ← | putative transporter YwkB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,617,854 | 0 | A | G | 98.1% | 377.8 / ‑2.6 | 103 | M113T (ATG→ACG) | U712_18650 | putative transporter YwkB |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (42/59); total (43/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.08e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
AGAAGACTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCATAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAAT > CP006881/3617724‑3617984 | agaagaCTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATg < 1:120447/137‑1 (MQ=255)agaagaCTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATg < 5:107980/137‑1 (MQ=255)agaagaCTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATg < 5:128568/137‑1 (MQ=255)agaagaCTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATg < 7:224330/137‑1 (MQ=255)agaagaCTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATg < 7:76032/137‑1 (MQ=255)agaagaCTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTAAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATg < 2:20964/137‑1 (MQ=255) agaCTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAAt < 8:219498/139‑1 (MQ=255) aCTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGt < 6:5350/139‑1 (MQ=255) aCTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGt < 8:107106/139‑1 (MQ=255) aCTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGt < 2:133938/139‑1 (MQ=255) aCTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGATTCCCAATACCGGGATACCCGTAAATGCGAATGt < 4:32776/139‑1 (MQ=255) aCCCACAGTAGCTATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATTCGAATGTCgg < 7:94652/138‑1 (MQ=255) aCCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCgg < 1:359469/138‑1 (MQ=255) aCCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGc > 2:136482/1‑139 (MQ=255) cAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCATAAATGCGAATGTCGGCtgtg > 6:15367/1‑138 (MQ=255) aGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa < 5:319327/139‑1 (MQ=255) aGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa < 1:136482/139‑1 (MQ=255) aGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa > 6:369319/1‑139 (MQ=255) aGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa < 8:303186/139‑1 (MQ=255) aGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGGGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa < 1:178432/139‑1 (MQ=255) tAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa > 5:7849/1‑137 (MQ=255) tAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa > 5:58660/1‑137 (MQ=255) tAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa > 7:243226/1‑137 (MQ=255) tAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa > 8:125129/1‑137 (MQ=255) tAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa > 4:78467/1‑137 (MQ=255) tAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa > 4:298042/1‑137 (MQ=255) tAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa > 1:4776/1‑137 (MQ=255) gCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGTTACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAGGCTTCCCAATACCGGGATACCCGTAAAGGCGAATGTCGGCTGTGCAGAGt > 4:104152/1‑139 (MQ=255) gATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTc < 5:196929/139‑1 (MQ=255) aTGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCaaa < 3:78467/138‑1 (MQ=255) aTGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCaaa < 4:370286/138‑1 (MQ=255) aTGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCa > 8:6407/1‑136 (MQ=255) aTGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCa > 7:224555/1‑136 (MQ=255) tGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGa < 2:95860/139‑1 (MQ=255) tGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGa < 8:243226/139‑1 (MQ=255) cgcgAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGaaaa > 1:363007/1‑138 (MQ=255) gcgAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGa > 5:376597/1‑134 (MQ=255) gcgAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGa < 6:376597/134‑1 (MQ=255) gcgAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATa < 5:369319/139‑1 (MQ=255) gATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGAt > 3:216042/1‑137 (MQ=255) aTCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAg > 6:364509/1‑139 (MQ=255) aTCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAg < 7:6407/139‑1 (MQ=255) gAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGt < 5:364509/139‑1 (MQ=255) tCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa < 2:144457/107‑1 (MQ=255) tCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCa > 1:144457/1‑107 (MQ=255) cgcgTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTaaa > 1:234827/1‑139 (MQ=255) gcgTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTaaa < 6:167563/138‑1 (MQ=255) gcgTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTaaa > 3:202521/1‑138 (MQ=255) gTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCa < 7:125129/139‑1 (MQ=255) gTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCa < 4:216042/139‑1 (MQ=255) ttAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCa > 5:324858/1‑138 (MQ=255) aCCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATAc < 2:324540/138‑1 (MQ=255) aCCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATAc < 2:4776/138‑1 (MQ=255) aCCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATAc < 2:21149/138‑1 (MQ=255) ccACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCATAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACtt < 5:15367/139‑1 (MQ=255) gATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATg > 7:95992/1‑77 (MQ=255) aTACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAata > 3:51985/1‑139 (MQ=255) gtgACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGt < 4:284230/116‑1 (MQ=255) gtgACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGt > 3:284230/1‑116 (MQ=255) tgACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCt > 8:21236/1‑139 (MQ=255) aCCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTg < 4:190729/138‑1 (MQ=255) aCCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTg > 6:23787/1‑138 (MQ=255) aCCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTg > 1:775/1‑138 (MQ=255) ccGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCa < 3:111671/139‑1 (MQ=255) cgcgATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCaa < 4:51985/139‑1 (MQ=255) cgATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAAc > 4:230575/1‑139 (MQ=255) cGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCaa > 5:366058/1‑138 (MQ=255) ggAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCAGTATATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCaaa < 3:126703/138‑1 (MQ=255) aTCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCTAACCAAAAGaa < 6:324858/139‑1 (MQ=255) aTCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGaa < 1:216932/139‑1 (MQ=255) aTCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGaa < 6:356721/139‑1 (MQ=255) aTCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGaa < 6:7849/139‑1 (MQ=255) aTCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGaa < 6:58660/139‑1 (MQ=255) aTCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGaa < 8:336333/139‑1 (MQ=255) aTCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGaa < 2:234827/139‑1 (MQ=255) cAACTTCATTCGCTCCGAATAAGCTTCACAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAatgat < 6:138544/139‑1 (MQ=255) tCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGTGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGaa < 4:28721/122‑1 (MQ=255) tCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGTGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGaa > 3:28721/1‑122 (MQ=255) tCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACtt > 4:60443/1‑96 (MQ=255) tCCGAATAAGCTTCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACtt < 3:60443/96‑1 (MQ=255) tCCCAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCaat > 6:2152/1‑138 (MQ=255) tCCCAATACCGGGATACCCGTAAATGAGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCaat > 5:232395/1‑138 (MQ=255) ccAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGATAATACAGATGAGTTCGt < 4:160990/70‑1 (MQ=255) ccAATACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGt > 3:160990/1‑70 (MQ=255) tACCGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTaaa < 3:230575/139‑1 (MQ=255) cGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCTAACCAAAAGAATGATGATATAGAAACCAAGAATCCCAATAATTAAACaa < 6:366058/139‑1 (MQ=255) cGGGATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGaa < 3:298042/139‑1 (MQ=255) ggATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGGAAACCAAAAGAATGATGATATAGAAACcaaca > 8:65832/1‑119 (MQ=255) ggATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGGAAACCAAAAGAATGATGATATAGAAACcaaca < 7:65832/119‑1 (MQ=255) ggATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAACCCAACAATCCCAATAATTAAAGAAAt > 4:26688/1‑139 (MQ=255) ggATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGaa < 7:273884/137‑1 (MQ=255) ggATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGaa > 8:273884/1‑137 (MQ=255) ggATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGaa > 6:26684/1‑137 (MQ=255) ggATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGaa < 5:26684/137‑1 (MQ=255) ggATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAAt > 4:31795/1‑139 (MQ=255) ggATACCCGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAAt > 4:353922/1‑139 (MQ=255) cccGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGa > 4:213564/1‑131 (MQ=255) cccGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGa > 4:151129/1‑131 (MQ=255) cccGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGa < 3:213564/131‑1 (MQ=255) cccGTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGa < 3:151129/131‑1 (MQ=255) | AGAAGACTCACCAACAGTAGCGATAATGATCGCGAGCGGATCAAGAATCGCGTTAACCACGATACCTGTGACCGCGATCGGAATCGCAACTTCATTCGCTCCGAATAAGCTTCCCAATACCGGGATACCCATAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAAT > CP006881/3617724‑3617984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |