Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	3,723,045	T→C	intergenic (‑159/‑142)	U712_19190 ← / → U712_19195	PTS system sucrose‑specific EIIBC component/putative transporter ywcJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	3,723,045	0	T	C	100.0%	311.3 / NA	89	intergenic (‑159/‑142)	U712_19190/U712_19195	PTS system sucrose‑specific EIIBC component/putative transporter ywcJ
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (34/55);  total (34/55)

AACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAACT‑GTTT‑TTTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGA  >  CP006881/3722909‑3723179                                                                                                                                         |                                                                                                                                         aaCAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCAt                                                                                                                                        >  1:219523/1‑139 (MQ=255)  aCAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCCCAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCAt                                                                                                                                        >  1:92480/1‑138 (MQ=255)              tAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCACGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCg                                                                                                                           >  6:115428/1‑139 (MQ=255)                     cGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACta                                                                                                                    >  5:153890/1‑138 (MQ=255)                     cGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACta                                                                                                                    >  5:159597/1‑138 (MQ=255)                           cGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACT‑Attt‑ttt                                                                                                            <  7:55836/139‑1 (MQ=255)                                   ggACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTaaa                                                                                                     <  5:115428/139‑1 (MQ=255)                                   ggACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTaaa                                                                                                     <  5:15943/139‑1 (MQ=255)                                   ggACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTaaa                                                                                                     <  6:249622/139‑1 (MQ=255)                                   ggACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTaaa                                                                                                     <  8:35241/139‑1 (MQ=255)                                      cacaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAg                                                                                                  >  1:136178/1‑139 (MQ=255)                                       acaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGt                                                                                                 <  2:129753/139‑1 (MQ=255)                                       acaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGt                                                                                                 >  7:40620/1‑139 (MQ=255)                                        caGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGtt                                                                                                >  5:280504/1‑139 (MQ=255)                                         aGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGttt                                                                                               >  1:257320/1‑139 (MQ=255)                                         aGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGttt                                                                                               >  7:34314/1‑139 (MQ=255)                                         aGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGttt                                                                                               >  3:11614/1‑139 (MQ=255)                                         aGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACAAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGttt                                                                                               >  1:371650/1‑139 (MQ=255)                                           cGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGa                                                                                             >  8:312563/1‑139 (MQ=255)                                            gATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGAt                                                                                            <  2:371650/139‑1 (MQ=255)                                              tCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATat                                                                                          <  5:351894/139‑2 (MQ=255)                                              tCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATa                                                                                           >  5:224931/1‑138 (MQ=255)                                              tCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATa                                                                                           >  3:371828/1‑138 (MQ=255)                                              tCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATa                                                                                           >  5:76339/1‑138 (MQ=255)                                                cTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACT‑Attt‑t                                                                                                              >  5:130262/1‑116 (MQ=255)                                                cTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACT‑Attt‑t                                                                                                              <  6:130262/116‑1 (MQ=255)                                                          tACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTACTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGAc                                                                               >  8:178612/1‑138 (MQ=255)                                                             gCAAATTTTAGGTCTTGCCTGCTTTACAAGTCACAATCCCGCTTATTAAGATTAAGAATACGCTTTCATCATAAAACATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTTATATAAAATGTAGACaaa                                                                            >  6:200207/1‑138 (MQ=255)                                                                             gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATat                                                                                          <  5:275200/108‑2 (MQ=255)                                                                             gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATat                                                                                          >  6:275200/1‑107 (MQ=255)                                                                             gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaaaatt                                                              <  5:376291/136‑3 (MQ=255)                                                                             gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaat                                                           >  1:127792/1‑137 (MQ=255)                                                                             gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaat                                                           >  6:105380/1‑137 (MQ=255)                                                                             gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                                            <  3:168616/138‑2 (MQ=255)                                                                             gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                                            <  8:34314/138‑2 (MQ=255)                                                                                  cTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCg                                                                                                                                 >  1:146916/1‑65 (MQ=255)                                                                                  cTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCg                                                                                                                                 <  2:146916/65‑1 (MQ=255)                                                                                  cTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTTAATATTTTGATATAACATGTAGACAAAAATTAGTAAAAATTAATtgtg                                                       >  2:231570/1‑138 (MQ=255)                                                                                  cTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtgtg                                                       <  4:189309/138‑1 (MQ=255)                                                                                     tACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaa                                                    <  2:127792/138‑1 (MQ=255)                                                                                     tACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaa                                                    >  1:320074/1‑138 (MQ=255)                                                                                     tACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaa                                                    <  2:136178/138‑1 (MQ=255)                                                                                      aCCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGAAAAAAATTCGAAAAAATTAATTGTGaaat                                                   >  8:369589/1‑137 (MQ=255)                                                                                       ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGAGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTAGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                                                  <  3:95154/138‑3 (MQ=255)                                                                                       ccAGTCACAATCCCGCTTATTCAGATTAAGAATAAGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                                                  <  8:44458/138‑3 (MQ=255)                                                                                       ccAGTCACAATCCAGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACT‑ATTTATTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                                                  <  1:37530/138‑3 (MQ=255)                                                                                         aGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACtt                                               <  5:109840/139‑1 (MQ=255)                                                                                           tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATATCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                             <  5:147074/139‑1 (MQ=255)                                                                                           tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                             <  6:159597/139‑1 (MQ=255)                                                                                           tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                             <  6:153890/139‑1 (MQ=255)                                                                                           tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                             <  1:57047/139‑1 (MQ=255)                                                                                             acaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcaca                                           <  4:160328/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATCTAACATGTAGACAAAAATTCGTAAAAATTTATTGTGAAATACTTCACAata                                        <  4:44724/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  2:320074/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  6:224931/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  3:367715/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  6:283151/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  7:255546/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  6:280504/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  8:249560/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  8:40620/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  1:168696/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  6:155076/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  5:320254/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  4:27610/139‑1 (MQ=255)                                                                                                aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  5:788/139‑1 (MQ=255)                                                                                                aTCCAGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTGAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                        <  8:366262/139‑1 (MQ=255)                                                                                                   ccGCTTATTCAGATTAATAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGCGAAATACTTCACAAAATCg                                     <  4:329701/139‑1 (MQ=255)                                                                                                   ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                      <  4:11614/138‑1 (MQ=255)                                                                                                   ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                      <  6:76339/138‑1 (MQ=255)                                                                                                   ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                      <  4:151825/138‑1 (MQ=255)                                                                                                   ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                      <  4:371828/138‑1 (MQ=255)                                                                                                   ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCg                                     <  5:105380/139‑1 (MQ=255)                                                                                                     gcatATTCAGATTAAGAATACTCTTTCATCATAAATCATTATAGAGTTTTCGTCAACTATTTT‑TTTAGGTAAATAGCTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                   <  1:258432/136‑1 (MQ=255)                                                                                                     gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                   <  3:251802/139‑1 (MQ=255)                                                                                                     gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                   <  2:219523/139‑1 (MQ=255)                                                                                                         aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTTGTTAAATAGTTTGATATAACATGTAGCCAAAAATTCGAAAAAATTAATTGTGAAATCCTTCACAATATCGTGCta                                >  2:57926/1‑138 (MQ=255)                                                                                                          ttCAGATTAAGAATACTCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata                              <  7:312563/139‑1 (MQ=255)                                                                                                           tCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata                              >  4:176337/1‑138 (MQ=255)                                                                                                             aGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACt                            <  4:151344/138‑1 (MQ=255)                                                                                                               aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                   >  8:207816/1‑129 (MQ=255)                                                                                                               aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                   <  7:207816/129‑1 (MQ=255)                                                                                                                       tACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCa                 <  7:52854/139‑1 (MQ=255)                                                                                                                         cGCTTTCATCATAAATCATGATAGGGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAATTACTTCACAATATCGTGCTATACTATGCTCAATCAt                >  4:184720/1‑138 (MQ=255)                                                                                                                         cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAATTAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTATTTGTGAATTACTTCACATTATCGTGCTATACTATGCTCAATCAtg               >  6:354680/1‑138 (MQ=255)                                                                                                                         cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAAAATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATAATTCACAATATCGTGGTATAGTATGCTCAATCAt                >  2:298750/1‑138 (MQ=255)                                                                                                                               catcatAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaaga          >  5:134262/1‑138 (MQ=255)                                                                                                                                    tAAATCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAg    >  4:80934/1‑139 (MQ=255)                                                                                                                                      aaTCATGATAGCGTTTTCGTCAACTATTTT‑TTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGa  <  7:75587/139‑1 (MQ=255)                                                                                                                                         |                                                                                                                                         AACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAACT‑GTTT‑TTTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGA  >  CP006881/3722909‑3723179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑