| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,986,559 | G→A | 5.0% | T90I (ACA→ATA) | U712_09815 ← | UPF0700 transmembrane protein yoaK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,986,559 | 0 | G | A | 5.0% | 263.7 / 2.1 | 79 | T90I (ACA→ATA) | U712_09815 | UPF0700 transmembrane protein yoaK |
| Reads supporting (aligned to +/- strand): ref base G (32/43); new base A (2/2); total (34/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01 | |||||||||||
GTTTTTTTGCTGCTGTAGTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAGCTAACCCC > CP006881/1986422‑1986696 | gTTTTTTTGCTGCTGTAGTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGt < 6:282376/139‑1 (MQ=255)gTTTTTTTGCTGCTGTAGTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGATCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGt < 7:167267/139‑1 (MQ=255) tttttGCTGCTGTAGTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTca < 1:226154/138‑1 (MQ=255) ttGCTGCTGTAGTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCAcag > 8:254880/1‑138 (MQ=255) gctgctGTAGTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGTTCACAGGAACAAATGCCCGGTAAATTGAATGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCAcagca < 3:64669/138‑1 (MQ=255) ctgctgTAGTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGa < 6:134097/139‑1 (MQ=255) ctgctgTAGTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGa < 7:254880/139‑1 (MQ=255) ctgctgTAGTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGa < 1:173811/139‑1 (MQ=255) gTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCaa < 7:115913/138‑1 (MQ=255) gTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCaa < 6:107003/138‑1 (MQ=255) tGAATCCCCATAGAAATGCTCATGAGTATATTTAGAATGTGCACAGGAACTAATGCCCGGTAAAAAGAAAGACAAGCTAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAGGGCGAAAggg > 6:111105/1‑139 (MQ=255) aaTCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTATCACAGCAGAAGGCCAAAGGGTa > 3:165101/1‑139 (MQ=255) aaTCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTATCACAGCAGAAGGCCAAAGGGTa > 3:169000/1‑139 (MQ=255) cATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGt < 8:72124/111‑1 (MQ=255) cATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGt > 7:72124/1‑111 (MQ=255) cTCATGAGTATAATTAGAATGTGCACAGGATCAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCaa > 6:168223/1‑117 (MQ=255) cTCATGAGTATAATTAGAATGTGCACAGGACCAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGAAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGa > 6:277527/1‑139 (MQ=255) cTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAATGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTGTTGTCACAGCAGAAGGCCACAGGGTATTTTCCGCCTTTCCGa > 2:83244/1‑139 (MQ=255) cTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCaa < 5:168223/117‑1 (MQ=255) cTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCg < 4:118327/138‑1 (MQ=255) cTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGa > 3:144402/1‑139 (MQ=255) aTGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCa > 5:31596/1‑139 (MQ=255) tGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCAt < 2:69932/139‑1 (MQ=255) tGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCAt < 6:31596/139‑1 (MQ=255) tGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCAt < 6:53789/139‑1 (MQ=255) gAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAgg < 7:244025/115‑1 (MQ=255) gAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAgg > 8:244025/1‑115 (MQ=255) gAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCAt > 8:193778/1‑138 (MQ=255) taATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATg > 3:71653/1‑138 (MQ=255) agtaTGTGCACAGGTACAAATGCCCGGTAAAAAGAAAGACAAGCATAGACAAACATAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCa < 2:61126/135‑1 (MQ=255) aGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGCCAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCa < 6:202442/138‑1 (MQ=255) aGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCa < 3:264843/101‑1 (MQ=255) aGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCa > 4:264843/1‑101 (MQ=255) aTGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGa > 3:37763/1‑139 (MQ=255) tgCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCTAGTGCGAGGGCTTGTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCa > 4:257541/1‑139 (MQ=255) tgCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCAt > 7:306088/1‑122 (MQ=255) tgCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCAt < 8:306088/122‑1 (MQ=255) tgCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCa > 5:254284/1‑139 (MQ=255) tgCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCa > 1:211405/1‑139 (MQ=255) tgCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCa > 6:297959/1‑139 (MQ=255) tgCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCa > 7:139914/1‑139 (MQ=255) tgCACAGGAACAAATGCCAGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGAAATGATCa > 4:123721/1‑139 (MQ=255) gCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATg < 4:83705/126‑1 (MQ=255) gCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATg > 3:83705/1‑126 (MQ=255) cacaGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCAcg > 2:32998/1‑139 (MQ=255) aCAAATGCCCTGTAAAAAGAAAGACACGCAAAGACAAACAAAATGAATGCTTCAAGTGATAGGGCTTTGGTAACAGAAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTACCAATGATCACGCCGCata < 5:211132/139‑1 (MQ=255) aCAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAAGGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCata < 8:95010/139‑1 (MQ=255) aaTGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGCCCATCAATGTAGCAATGATCACGCCGCAtata > 2:178684/1‑138 (MQ=255) aTGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATaaa > 4:91682/1‑139 (MQ=255) tGCACGGTAAAAAGAAATCCACTCAAAGACAAACAAAATGAATGCTTCCAGTGCGCGGGCTTTTGGAACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATTTATCAATGATCACGCCGCATATCAAt < 3:16947/139‑1 (MQ=255) ggTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCAcgcc < 5:293646/124‑1 (MQ=255) ggTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCAcgcc > 6:293646/1‑124 (MQ=255) tAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCCCGCCGCATATAAATCCGAt > 4:104338/1‑137 (MQ=255) tAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGAt > 4:61621/1‑137 (MQ=255) aaagaaagACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAgcg < 5:229216/139‑1 (MQ=255) aaGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTaa < 6:212886/139‑1 (MQ=255) aaGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTaa < 5:100778/139‑1 (MQ=255) aaacaaaATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACa < 4:37763/139‑1 (MQ=255) tgaatgCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAgcg > 8:108627/1‑111 (MQ=255) tgaatgCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAgcg < 7:108627/111‑1 (MQ=255) aatgCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGaa < 5:132735/139‑1 (MQ=255) atgCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATTTAGCAATGATCACGCAGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGaa < 8:139914/138‑1 (MQ=255) atgCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGaa < 7:193778/138‑1 (MQ=255) gtaaGTGCTATGGAGTTTGTAACAGCAGAATGCAAAAGGTTATTTTCCGCCTTTACGAGAATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGAt < 4:195728/136‑1 (MQ=255) aGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAg > 7:165166/1‑139 (MQ=255) aGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAg < 4:144402/139‑1 (MQ=255) aGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAg > 7:126031/1‑139 (MQ=255) aGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAg > 5:152497/1‑139 (MQ=255) aGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGAAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAg > 8:203448/1‑139 (MQ=255) aGGGCTTTGGTCACAGCAGAAGGCCAACGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAACGCTCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAg < 2:133718/139‑1 (MQ=255) aGGGCTCTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTCGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAg < 8:290221/139‑1 (MQ=255) ggCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAGCt < 6:274103/139‑1 (MQ=255) ggCTTTTATCACAGCCGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCAACAATGTCGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAGCt < 4:165101/139‑1 (MQ=255) ggCTTTTATCACAGCAGACGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCACTGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAGCt < 4:169000/139‑1 (MQ=255) gCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAGCTa < 5:158335/139‑1 (MQ=255) ttGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGCCCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAGCTAAc < 6:254284/137‑1 (MQ=255) ttGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAGCTAAc < 3:123721/137‑1 (MQ=255) ttGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAGCTAAc < 2:211405/137‑1 (MQ=255) ttGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAGCTAAc < 1:32998/137‑1 (MQ=255) gTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAGCTAAcccc < 6:152497/138‑1 (MQ=255) | GTTTTTTTGCTGCTGTAGTTTGAATCCCCATAGAAATGCTCATGAGTATAATTAGAATGTGCACAGGAACAAATGCCCGGTAAAAAGAAAGACAAGCAAAGACAAACAAAATGAATGCTTCAAGTGCGAGGGCTTTTGTCACAGCAGAAGGCCAAAGGGTATTTTCCGCCTTTCCGACCATCAATGTAGCAATGATCACGCCGCATATAAATCCGATTAGCGCAGTCAAGGAATTAAAAACAGTGACCTGAATGGATTTGCCGATAGCTAACCCC > CP006881/1986422‑1986696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |