Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | BS168_reference_genome | 2,480,654 | Δ1 bp | intergenic (+29/+96) | zwf → / ← gndA | glucose‑6‑phosphate 1‑dehydrogenase (NADP‑dependent)/NADP+‑dependent 6‑P‑gluconate dehydrogenase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | BS168_reference_genome | 2,480,654 | 0 | T | . | 99.4% | 888.2 / ‑1.0 | 178 | intergenic (+29/+96) | zwf/gndA | glucose‑6‑phosphate 1‑dehydrogenase (NADP‑dependent)/NADP+‑dependent 6‑P‑gluconate dehydrogenase |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base . (75/102); minor base C (0/1); total (75/103) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.83e-01 |
Only 100 of 178 total aligned reads displayed.
TCTGAAACATGGGCAGCAAACAAAACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAATAGTTTACTAAGCATTTTCGGTCTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCAGTACGCTC > BS168_reference_genome/2480509‑2480797 | cTGAAACATGGGCAGCAAACAAAACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCAt < 1:1156994/150‑1 (MQ=255) tGAAACATGGGCAGCAAACAAAACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCAtt > 2:1229022/1‑150 (MQ=255) aaaCATGGGCAGCAAACAAAACGTTATCTCCTAACTAGGAATCAGGCCCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCAtttt < 1:324347/150‑1 (MQ=255) aaaCATGGGCAGCAAACAAAACCTTATCTCCTAACTCCGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCAtttt < 2:3783713/150‑1 (MQ=255) aaaCATGGGCAGCAAACAAAACCTTATCTCCTAACTACGAATCAGGCTCAATGGGCCCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GGAAATGTTTAC‑AAGCAtgtt > 2:3535232/1‑150 (MQ=255) aaaCATGGGCAGCAAACAAAACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCAtttt < 1:2300894/150‑1 (MQ=255) aaCATGGGCAGCAAACAAAACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTc < 2:1020994/150‑1 (MQ=255) gggCAGCAAACAAAACCTTATCTCCTAACTACAAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCggctt < 1:3095711/150‑4 (MQ=255) gcagcaAACAAAACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGAC‑GAAAATGTTTAC‑AAGCATTTTCGG‑Ctttt > 1:1077107/1‑150 (MQ=255) cagcaAACAAAACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑Cttttt < 2:3249264/150‑1 (MQ=255) agcaAACAAAACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAGAAAAGCC‑GAAAATGTTTAC‑AACCATTTTCggctatttt > 2:3696323/1‑143 (MQ=255) aacaaaACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGc < 2:3227045/150‑1 (MQ=255) aacaaaACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGc < 1:3610458/150‑1 (MQ=255) accaaaCCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCt < 1:1282536/147‑1 (MQ=255) aaaaCCTTATCTCCTAACTACGAATCAGGCACAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGa < 1:4057334/150‑1 (MQ=255) aaaCCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTTCGCTGaa > 2:3068904/1‑150 (MQ=255) aaCCTTACCTCCTAACTCCGAATCAGGCTCAATGGGACCGGAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGATTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAAc < 1:1101941/150‑1 (MQ=255) cctaacctcCAAACTACGAATCAGGCCCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACaa < 2:3495812/144‑1 (MQ=255) ccTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATATTCGG‑CTTTATTACGCTGAACaa > 2:4030186/1‑150 (MQ=255) cTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACaaa > 2:1063851/1‑150 (MQ=255) ttATCTCCTAACTACGAACCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAg < 2:3248653/150‑1 (MQ=255) tctcCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGta > 2:1177324/1‑150 (MQ=255) ctcCTACCTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGtat < 2:557039/150‑1 (MQ=255) ctcCTAACTACGAATCAGGCTCAATGGGACCGAAACAATCTTATGATCTTTTGGTGAAAGATTGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AGACATTTTCGG‑CTTTTTTACGCTGAACAAAGGtat > 2:2510203/1‑150 (MQ=255) ccTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATaa < 1:893168/150‑1 (MQ=255) ccTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATaa > 2:3981633/1‑150 (MQ=255) cTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CCTTTTTACGCTGAACAAAGGTATAAc > 1:1707365/1‑150 (MQ=255) aaCTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGGTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACaa > 2:2865010/1‑150 (MQ=255) aCTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAAt < 2:157213/150‑1 (MQ=255) aCTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTGTACGCTGAACAAAGGTATAACAAt > 2:3281085/1‑150 (MQ=255) cTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAAtc > 2:273463/1‑150 (MQ=255) cTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAAtc < 2:1034589/150‑1 (MQ=255) cGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTcc < 1:2385488/150‑1 (MQ=255) cGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTcc < 1:3343215/150‑1 (MQ=255) aTCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGGATAACAATCTCCTta > 2:2032542/1‑150 (MQ=255) ggCTCAATGGGCCCGAAAGATTCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAACCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTtaataa < 1:774220/150‑1 (MQ=255) ggCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTtaataa < 1:3172014/150‑1 (MQ=255) tCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACaa > 2:2703357/1‑150 (MQ=255) cAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACaaa < 1:1520076/150‑1 (MQ=255) aaTGGGACCGAAGGAATCTGATGACCTTTTGGTGAAAGCCGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACaaaa < 2:1619425/150‑1 (MQ=255) aaTGGGACCGAAAGAATCTGATGATGTTTCGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAACAAGCCTGAAAT‑GTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACaaaa < 1:3555518/150‑1 (MQ=255) aaTGGGACCGAAAGAATCTGATGACCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACaaaa < 2:1169117/150‑1 (MQ=255) gggACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACCAAAccc > 2:631933/1‑150 (MQ=255) gACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAAccccc < 1:2700233/150‑1 (MQ=255) aCCGAAAGAACCTGATGATCTTTGGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCa < 1:960355/150‑1 (MQ=255) cGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCaaa < 2:2800049/150‑1 (MQ=255) gAAGGAACCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAg < 2:684486/150‑1 (MQ=255) aaaGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGCAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGc > 2:3844324/1‑150 (MQ=255) aaGATTCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCt < 1:1229022/150‑1 (MQ=255) aGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCtt < 2:246613/150‑1 (MQ=255) gaTCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTaa < 1:2090908/149‑1 (MQ=255) aTCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAag < 1:1662301/150‑1 (MQ=255) tgatgaTCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGc > 1:876405/1‑150 (MQ=255) gatgatCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCt > 1:3494314/1‑150 (MQ=255) atgatCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCtt > 2:16590/1‑150 (MQ=255) cTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCgggg < 2:2910757/150‑1 (MQ=255) tttGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGt < 2:3045863/150‑1 (MQ=255) tttGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGt > 2:3188343/1‑150 (MQ=255) ggTGAAAGACGGCTTACACTGGTGGAACAAATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATAGT‑GGGCTTTTTTACTCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAACAGCTTCGGGGGTTTc > 2:2219227/1‑150 (MQ=255) gAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCCTCGGGGGTTTCTAt > 2:2217113/1‑150 (MQ=255) aaaGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTAtt > 2:2757852/1‑150 (MQ=255) aCGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGAtt < 1:306603/150‑1 (MQ=255) cGGCTTACACTGGTGGAACATATAATAAGAAGAAACAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTa < 1:1393181/150‑1 (MQ=255) ggCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTAc < 1:2547446/150‑1 (MQ=255) cctagtcTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCCTTTTCTGT‑TTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACtt < 1:1494132/144‑1 (MQ=255) cTTACACTGGTGGAACATATAATAAGAAGAAAAAACCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACtt < 1:1290452/150‑1 (MQ=255) ttACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTc > 1:3785893/1‑150 (MQ=255) cTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCa < 2:876405/150‑1 (MQ=255) tggtggAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGGACAAAGGTACAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGTTTCGGGGGTTTCTATTGATTACTTCATCCAt > 1:520260/1‑150 (MQ=255) tggtggAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTATTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGATTCTATTGATTCCTTCATCCAt > 1:3904084/1‑150 (MQ=255) ggtggAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCAtt > 1:1767116/1‑150 (MQ=255) gtggAACATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGGTTCTATTGATTACTTCATCCATTc > 2:3609157/1‑150 (MQ=255) aaCATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTTC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTa < 1:3685042/150‑1 (MQ=255) aaCATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTa > 2:551373/1‑150 (MQ=255) cATATAATAAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCAACCATTCAGTATg > 2:2100302/1‑150 (MQ=255) ataaAATAGGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTAACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATgg < 1:3284206/150‑1 (MQ=255) ataataAGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGCGTTTCTATTGATTACTTCATCCATTCAGTATGGaa > 2:1095516/1‑150 (MQ=255) taataaGAAGAAAAAAGGC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTCTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAg < 1:2960514/150‑1 (MQ=255) taataaGAAGAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAg < 1:3642398/150‑1 (MQ=255) aataaGAAGAAAGAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGa < 1:631933/150‑1 (MQ=255) taaGAAGAAAAAAGCC‑GAAATTGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATg < 2:1861348/150‑1 (MQ=255) aagaagAAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGc < 2:3404232/150‑1 (MQ=255) agaagaAAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTATTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGcc < 1:1825517/150‑1 (MQ=255) gaagaaAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCct < 2:2344508/150‑1 (MQ=255) aagaaAAAAGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCctt < 1:2623828/150‑1 (MQ=255) aaaaaaGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCcttctt > 2:3178244/1‑150 (MQ=255) tacaGCC‑GAAAATGATTAC‑AAGCATTTTCGG‑CCAATTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTg > 2:2609983/4‑150 (MQ=255) aGCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCa < 1:3732422/150‑1 (MQ=255) gCC‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCAg > 2:1813211/1‑150 (MQ=255) cc‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGGTGCCTTCTTTGTCAGt > 1:2741481/1‑150 (MQ=255) cc‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTATCAGt > 1:2060476/1‑150 (MQ=255) c‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGGGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCAGTa > 2:1530648/1‑150 (MQ=255) c‑GAAAATGTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCAGTa > 2:148145/1‑150 (MQ=255) cggaaatgTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCAGTa < 2:2538521/143‑1 (MQ=255) aaaatgTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGGAGATGCCTTCTTTGTCAGTACg > 1:977244/6‑150 (MQ=255) aaaatgTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCAGTACg < 1:3004148/145‑1 (MQ=255) aaatgTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCAGTACGc > 2:3817551/5‑150 (MQ=255) aatgTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGTTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCAGTACGCt < 2:520260/147‑1 (MQ=255) aatgTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCAGTACGCt > 2:1187065/4‑150 (MQ=255) aatgTTTAC‑AAGCATTTTCGG‑CTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCAGTACGCt > 2:1927165/4‑150 (MQ=255) | TCTGAAACATGGGCAGCAAACAAAACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGAATCTGATGATCTTTTGGTGAAAGACGGCTTACACTGGTGGAACATATAATAAGAAGAAAAAAGCC‑GAAATAGTTTACTAAGCATTTTCGGTCTTTTTTACGCTGAACAAAGGTATAACAATCTCCTTAATAACAAAACCCCCAAAGCTTAAGAGCTTCGGGGGTTTCTATTGATTACTTCATCCATTCAGTATGGAAGATGCCTTCTTTGTCAGTACGCTC > BS168_reference_genome/2480509‑2480797 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |