Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | BS168_reference_genome | 2,097,087 | (A)7→8 | intergenic (‑111/+39) | azoJ ← / ← yocK | FMN‑dependent NADH‑azoreductase/putative general stress protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | BS168_reference_genome | 2,097,080 | 1 | . | A | 91.8% | 623.1 / 48.5 | 182 | intergenic (‑104/+46) | azoJ/yocK | FMN‑dependent NADH‑azoreductase/putative general stress protein |
Reads supporting (aligned to +/- strand): ref base . (8/7); new base A (74/93); total (82/100) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.92e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.43e-01 |
Only 100 of 198 total aligned reads displayed.
CTTCAGCTGTACGGTCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑AA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCTTTTACCTGTTCATGAAA > BS168_reference_genome/2096931‑2097224 | cttcAGCTGTACGGTCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAATTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTc < 1:899478/150‑1 (MQ=255) cttcAGCTGTACGGTCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTc > 2:3535066/1‑150 (MQ=255) ttcAGCTGTACGGTCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACCTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGCCAATCACTTTATTTTGAATAGGAGATT‑TTTTTTC‑a < 1:2762118/150‑1 (MQ=255) aGCTGTACGGTCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑aa‑aa > 2:3116676/1‑150 (MQ=255) cTGTACGGTCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑aa‑aaaa < 1:3433870/150‑1 (MQ=255) gTACGGTCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑aa‑aaaa‑aa > 2:276921/1‑149 (MQ=255) cGGTCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑aa‑aaaa‑aagca > 1:2173842/1‑146 (MQ=255) ggTCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑aa‑aaaa‑aagcaa > 2:2225984/1‑145 (MQ=255) ggTCGCTTGATTTTACAAACAAAACTGTAGACATCTGTATTGCCCGCGGTACACTTTTTATATTTACTTACAAATAGTATGTTACTTGCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑aa‑aaaa‑aagcaa < 1:2836377/150‑6 (MQ=255) gTCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAg < 1:574998/150‑1 (MQ=255) tCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGt < 2:1507135/150‑1 (MQ=255) cGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGGTT‑TTTTTTCAAA‑AAAA‑A‑GCAAgaa > 2:825244/1‑148 (MQ=255) cTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACa < 1:2913645/150‑1 (MQ=255) tgtttttACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTCTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATc < 1:2803105/147‑1 (MQ=255) gATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCt < 1:3993072/150‑1 (MQ=255) aTTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTa > 2:1832806/1‑150 (MQ=255) ttttACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTaa > 1:1655528/1‑150 (MQ=255) ttttACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTaa > 1:1161555/1‑150 (MQ=255) tttACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAat < 1:37327/150‑1 (MQ=255) aCAAATAAGACTGTGGGCATTTGTCTTCCACCCGGTAACCTTTTTATATGTACGTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCCCTTTATTTTGAATATGAGATT‑TTTTCTCAAA‑AAAA‑A‑GCAAGTACATCTAATATc < 2:1353184/150‑1 (MQ=255) aTAAGACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTAGGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGgtg < 2:3932969/150‑1 (MQ=255) aaCTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTAct < 2:1161555/150‑1 (MQ=255) aaCTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTAct < 1:1386721/150‑1 (MQ=255) tGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTActtgc > 1:1231022/1‑150 (MQ=255) tAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTActtgctt < 1:3451398/150‑1 (MQ=255) tAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑AA‑AAAA‑AGGCAAGTACAACTAATATCGGTGTActtgctt > 1:3566834/1‑150 (MQ=255) cATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCa < 2:1859878/150‑1 (MQ=255) gTATTCCTCCCGGTAAACTTCTTATATTTTCTTTCAAATAGTATGTTCCTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCAttttt < 2:3976208/150‑1 (MQ=255) tATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTa > 1:3272253/1‑150 (MQ=255) aTTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTAc > 1:1987916/1‑150 (MQ=255) aTTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTAACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTAc < 1:316353/150‑1 (MQ=255) ttCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACt < 1:2528921/150‑1 (MQ=255) cccccccGGTAAACTTTTTATATTTTCTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACtt < 2:1160312/146‑1 (MQ=255) cctccCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTc > 2:462102/1‑150 (MQ=255) ccGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACGTGCTTGGCATTTTTACTTCGAAt > 2:1311740/1‑150 (MQ=255) ggTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCt < 2:3044458/150‑1 (MQ=255) gTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCtt > 1:1430917/1‑150 (MQ=255) aaCTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGtt > 2:1395522/1‑150 (MQ=255) tcTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTCCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTc < 2:2960014/149‑1 (MQ=255) cTTTTTATTTTTCCTTACAAATAGTATGTTACTTTCTTTTCTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑AA‑AAAA‑ATGCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCa < 1:3691943/150‑1 (MQ=255) cTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCa < 2:211021/150‑1 (MQ=255) cTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCAATTTTACTTCGAATCTTGGTCa > 2:1535952/1‑150 (MQ=255) tttttATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCAc < 2:1480305/150‑1 (MQ=255) ttttATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACg < 1:3092718/150‑1 (MQ=255) tattTTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATc < 2:3772469/150‑1 (MQ=255) atatTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATcc > 1:3640430/1‑150 (MQ=255) atatTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATcc < 1:2032728/150‑1 (MQ=255) atatTTACTTACAAATAGTATGTAACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATcc < 1:2260731/150‑1 (MQ=255) atTTACTTACAAATAGTATGTTACATTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCaa < 1:865106/150‑1 (MQ=255) tttCCTTCCAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAg < 2:1469889/150‑1 (MQ=255) tacttacAAATAGTATGTTACTTTCTTTTTTACGTGAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGAt < 1:2674416/150‑1 (MQ=255) acttacAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGAtt < 1:320285/150‑1 (MQ=255) cAAATAGTATGTTACTTTCATTTTTACATAAAGTCAATCACTTTATTTTGATTATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATa < 1:2335874/150‑1 (MQ=255) aaaTAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATAc < 2:2345781/150‑1 (MQ=255) aaTAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACg < 2:44702/150‑1 (MQ=255) tAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTc < 1:1395522/150‑1 (MQ=255) aGTATGTTCCTTTCTTTTTTACGTAAAGCCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCt < 2:323314/150‑1 (MQ=255) aGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGGTCCAAGATTTCATACGTCt > 2:736879/1‑150 (MQ=255) aGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCt < 1:3530731/150‑1 (MQ=255) aTGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCg < 2:2640056/150‑1 (MQ=255) aTGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCg > 2:419307/1‑150 (MQ=255) gTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTACAAA‑AAAA‑A‑GCAAGTAAATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAg < 1:1907296/150‑1 (MQ=255) ttACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGGCTGCGAGc > 2:2262114/1‑150 (MQ=255) ctttctttTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCttt > 1:887119/1‑150 (MQ=255) ctttctttTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCttt > 1:763611/1‑150 (MQ=255) ttttttttttACGTAAAGTCAATCATTTTATTTTGAATATGAGATTCGTTATGA‑AA‑AAAA‑A‑GCATGTACATCTAATATCGGTGTTATTGCTTGGTATTTTTACTTCGAATCTTGTTCACGATTCAAGATTTCATACGTCTGCGAGCtatt < 1:2717905/150‑1 (MQ=255) tttctttTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCtttt < 1:528238/150‑1 (MQ=255) tttttACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGAt < 1:915306/150‑1 (MQ=255) tttttACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGAt < 1:698093/150‑1 (MQ=255) ttttACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATc < 2:2816583/150‑1 (MQ=255) tttACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGTTCa > 2:3278947/1‑150 (MQ=255) ttACGTGAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑AA‑AAAACA‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCaa < 2:1784202/150‑1 (MQ=255) tACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAAt < 1:2643145/150‑1 (MQ=255) gTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGt < 2:84131/150‑1 (MQ=255) gTAAAGTCAATCACTTCATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACACCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGt < 1:1688745/150‑1 (MQ=255) aaaGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTATTTGATCAATTGttt > 1:1404389/1‑150 (MQ=255) aaaGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑AA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTc > 2:2062366/1‑150 (MQ=255) aGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCt > 1:2487876/1‑150 (MQ=255) gTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCtt > 2:3453933/1‑150 (MQ=255) acttCACTTTATTTTGAATATGAGATT‑TTTTTTC‑AACAAAA‑A‑GCAAGTTCATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTttg < 1:2709162/147‑1 (MQ=255) tCACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTttgttg > 2:1380721/1‑150 (MQ=255) cACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTgg < 2:3133136/150‑1 (MQ=255) cACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTgg > 2:3354530/1‑150 (MQ=255) cACTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGGGTACTTGCTTGGCATTTTTACTTCGAATCTTGGTCACGATCCAAGATTTCATACGGCTGCGAGCCTGTTTGATCAATTGTTTCTTTGCTgg > 2:2709162/1‑150 (MQ=255) aCTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGa > 2:3643627/1‑150 (MQ=255) cTTTATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGAt < 2:524697/150‑1 (MQ=255) ttttttttGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTTTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTTTTTGTTGGATa < 1:2138847/150‑1 (MQ=255) tttATTTTGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATa > 2:2045445/1‑150 (MQ=255) ttGAGTATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCtt < 2:1547936/150‑1 (MQ=255) tGAATATGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCttt < 2:2419543/150‑1 (MQ=255) atatGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCTTTTAc < 1:391433/150‑1 (MQ=255) tatGAGATT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCTTTTAcc > 2:4066199/1‑150 (MQ=255) gagtTT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTCCATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGATTCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCTTTTACCTGt < 1:3225478/150‑1 (MQ=255) gagtTT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAACATCGGTGTACTTGCTTGGCGTTTTGACTTCGAATCTTGTCCACGAGCCAAGATTTCATACGTATGCGAGCTTTATTGATCAATTGTTTCCTTGATGGATAAGTCTTTTACCTGt > 2:2391679/1‑150 (MQ=255) gagaTT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCTTTTACCTGt < 1:3116676/150‑1 (MQ=255) aTT‑TTTTTTCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCTTTTACCTGTTCa < 2:3526390/150‑1 (MQ=255) tt‑ttttttCAAA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGTTCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCCTTTACCTGTTCAt > 2:3803130/1‑150 (MQ=255) tt‑tttttcA‑AA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCTTTTACCTGTTCATg > 1:830993/1‑150 (MQ=255) tt‑tttttcA‑AA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCTTTTACCTGTTCATg > 1:3131577/1‑150 (MQ=255) tttttcA‑AA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCTTTTACCTGTTCATGaa < 2:1729124/150‑1 (MQ=255) | CTTCAGCTGTACGGTCGCTTGATTTTACAAATAAAACTGTAGACATTTGTATTCCTCCCGGTAAACTTTTTATATTTACTTACAAATAGTATGTTACTTTCTTTTTTACGTAAAGTCAATCACTTTATTTTGAATATGAGATT‑TTTTTTC‑AA‑AAAA‑A‑GCAAGTACATCTAATATCGGTGTACTTGCTTGGCATTTTTACTTCGAATCTTGTTCACGATCCAAGATTTCATACGTCTGCGAGCTTTTTTGATCAATTGTTTCTTTGTTGGATAAGTCTTTTACCTGTTCATGAAA > BS168_reference_genome/2096931‑2097224 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |