New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? BS168_reference_genome 3486759 =2 (0.020)48 (0.020)
+ACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAG		 29/152 0.3 93.0% intergenic (+1/+48) araR/yvbT transcriptional repressor of the ara regulon (LacI family)/putative alkanal monooxygenase
?pSIJ663_pHT315_araE_xy 9781 = 10 (0.000)intergenic (+5050/–) ampR/– –/–

Only 100 of 124 total aligned reads displayed.

GACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  BS168_reference_genome/3486896‑3486759
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTAT  >  pSIJ663_pHT315_araE_xy/9781‑9915
                                                                                                                                          ||||||||||||||||||||||||||||||||||||||||||||||||||                                                                                                                                       
GACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTTGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTA                                                                                                                                                                                          >  7:376927/1‑139
 ACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTAC                                                                                                                                                                                         <  3:356786/139‑1
 ACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTA                                                                                                                                                                                          <  2:30908/138‑1
   GAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTG                                                                                                                                                                                       <  8:178350/139‑1
     AATTATGGTTAACTCAGAAACCGTTGAACAAGCAGACAGAATGCGTTAGTTTGAAATCATCGCTGACGTTTTGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGC                                                                                                                                                                                      <  3:314977/138‑1
      ATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGT                                                                                                                                                                                    >  5:376473/1‑139
            GTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATA                                                                                                                                                                               <  6:514761/138‑1
               AACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGCCGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATCCATTGCTTTTTACTGCGTCAATACACG                                                                                                                                                                           >  1:537773/1‑139
               AACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAATCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACG                                                                                                                                                                           >  5:129416/1‑139
                    AGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGA                                                                                                                                                                       >  1:288746/1‑138
                      AAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACAC                                                                                                                                                                    <  8:201875/139‑1
                      AAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACAC                                                                                                                                                                    <  7:267943/139‑1
                      AAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACAC                                                                                                                                                                    <  2:406537/139‑1
                      AAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACAC                                                                                                                                                                    <  2:34597/139‑1
                      AAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACA                                                                                                                                                                             >  1:448310/1‑130
                      AAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACA                                                                                                                                                                             <  2:448310/130‑1
                             TGATCACGCAGACAGAATTCGTTCGTTTGAAATGATCGCTGACGTTTGGTAATACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTT                                                                                                                                                               <  5:902/137‑1
                                ACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAATAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAA                                                                                                                                                          <  8:266240/139‑1
                                    GCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGT                                                                                                                                                      >  7:437757/1‑139
                                    GCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATA                                                                                                                                                                               >  5:99078/1‑114
                                    GCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATA                                                                                                                                                                               <  6:99078/114‑1
                                              TGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTAT                                                                                                                                            >  4:156905/1‑139
                                              TGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGAC                                                                                                                                                                      <  7:522131/113‑1
                                              TGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGAC                                                                                                                                                                      >  8:522131/1‑113
                                               GCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGCCCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTAT                                                                                                                                            >  5:428733/1‑138
                                                      TTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACA                                                                                                                                    >  5:175956/1‑139
                                                         GAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGTGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATG                                                                                                                                  <  8:417784/138‑1
                                                             TCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGG                                                                                                                             <  1:385741/139‑1
                                                               ATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGT                                                                                                                                                        >  3:263242/1‑110
                                                               ATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGT                                                                                                                                                        <  4:263242/110‑1
                                                                TCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGT                                                                                                                                        >  6:85137/1‑125
                                                                TCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGT                                                                                                                                        <  5:85137/125‑1
                                                                           TGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTAT                                                                                                                                            >  7:84868/1‑110
                                                                            tGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAAT                                                                                                               <  8:376927/137‑1
                                                                             tAAAAACAGATATAATCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTAAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATG                                                                                                              <  6:129416/137‑1
                                                                             GAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATG                                                                                                              <  2:288746/138‑1
                                                                             GAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATG                                                                                                              <  1:365227/138‑1
                                                                                 AACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAA                                                                                                         <  6:376473/139‑1
                                                                                  ACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAA                                                                                                         >  3:290454/1‑138
                                                                                             CTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTAT                                                                                                                                            >  2:245290/1‑92
                                                                                             CTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTAT                                                                                                                                            <  1:245290/92‑1
                                                                                                     AAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAA                                                                                                                                                          <  1:364340/70‑1
                                                                                                     AAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAA                                                                                                                                                          >  2:364340/1‑70
                                                                                                       AGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAAGTCAATTAGAACa                                                                                    >  7:485939/1‑137
                                                                                                                  GGGGAGACCCATACATTTCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGT                                                                        <  8:335680/139‑1
                                                                                                                      AGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGATTACTCCAACTCATTTAGAACCAAATGTTCCTGTAAg                                                                     >  2:98813/1‑137
                                                                                                                      AGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAC                                                                     >  3:345992/1‑138
                                                                                                                      AGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATG                                                                                                              <  3:514068/97‑1
                                                                                                                      AGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATG                                                                                                              >  4:514068/1‑97
                                                                                                                        ACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAC                                                                     >  6:316180/1‑136
                                                                                                                          CCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAG                                                                  >  8:457756/1‑137
                                                                                                                           CATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAG                                                               >  6:291648/1‑139
                                                                                                                           CATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAG                                                               >  3:21532/1‑139
                                                                                                                           CATACATTGCTTTTTACTGCGGCAAAACACGTTCACACTCTTTTGAACGGGTGTTAAATAATCAGTGACATGAAAGCAATTATTTTAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAG                                                               <  8:485939/139‑1
                                                                                                                             TACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGC                                                              >  3:63412/1‑138
                                                                                                                                 TTGCTTTTTACTGCGTCAATACACGTTGACACTCTGTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTAGAATATGAAGAATACTCCAACTCAATTAGAACCTAATGTTCCTGTAACAAGAAGCCATT                                                          >  3:300746/1‑138
                                                                                                                                  ttCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTG                                                                                                                    <  8:336800/77‑1
                                                                                                                                  TGCTTTTTACTGCTTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTC                                                         >  2:245668/1‑138
                                                                                                                                  TGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTC                                                         >  6:5794/1‑138
                                                                                                                                  TGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTC                                                         >  7:307678/1‑138
                                                                                                                                  TGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTC                                                         >  3:205027/1‑138
                                                                                                                                  TGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTC                                                         >  3:17784/1‑138
                                                                                                                                  TGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTG                                                                                                                    >  7:336800/1‑79
                                                                                                                                  TGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGT                                                                                                                                        >  2:274348/1‑59
                                                                                                                                  TGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGT                                                                                                                                        <  1:274348/59‑1
                                                                                                                                    CTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACA                                                                    >  1:168339/1‑125
                                                                                                                                    CTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACA                                                                    <  2:168339/125‑1
                                                                                                                                    CTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAAC                                                                                                >  8:268829/1‑97
                                                                                                                                    CTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAAC                                                                                                <  7:268829/97‑1
                                                                                                                                      TTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCATCTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGG                                                    >  4:366363/1‑139
                                                                                                                                       TTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAAT                                                                                           >  5:390250/1‑99
                                                                                                                                       TTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAAT                                                                                           <  6:390250/99‑1
                                                                                                                                        TTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGA                                                  >  1:10874/1‑139
                                                                                                                                          ACTGCGTAAATACACGTTGACACTTTTTTGAATGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGAT                                                 <  2:427570/138‑1
                                                                                                                                              CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGT                                             >  5:102505/1‑138
                                                                                                                                              CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGT                                             >  1:427570/1‑138
                                                                                                                                                      CACGTTGAAACTCTTTTGAAAGTGGGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAT                                    <  5:285320/139‑1
                                                                                                                                                                   taTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTAGTCATTTTGATCTCATGTGCGGag                       >  1:33245/3‑137
                                                                                                                                                                   TTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCG                       >  3:296807/1‑139
                                                                                                                                                                   TTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCG                       >  7:93848/1‑139
                                                                                                                                                                   TTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCG                       >  1:85202/1‑139
                                                                                                                                                                     TTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAA                                                       >  3:238687/1‑105
                                                                                                                                                                     TTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAA                                                       <  4:238687/105‑1
                                                                                                                                                                           GTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGG               <  7:457756/139‑1
                                                                                                                                                                           GTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGG               >  8:293080/1‑139
                                                                                                                                                                             GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCG             >  3:5611/1‑139
                                                                                                                                                                             GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCG             >  4:273790/1‑139
                                                                                                                                                                             GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCG             >  6:39958/1‑139
                                                                                                                                                                             GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCG             >  8:267844/1‑139
                                                                                                                                                                               GTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTATCAAGAAGCCATTCAATGGCATTTGTCATATTGATCTCATGTGCGGCGGGGCTTTGCGGC           >  8:67772/1‑139
                                                                                                                                                                                   AATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTA        <  3:156905/138‑1
                                                                                                                                                                                       ttctGTGAAATGAAAGGAAGTATTTGATATTGATCACTACTCCAACTCAATTAGAAGCAAATGTTCCTGTAACAAGAAGCCCTTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTGGGCGGCTTATTGT    <  4:300746/134‑1
                                                                                                                                                                                       taCAGTCACATCAAAGCATTTATTTTAAAATTAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGT    <  4:5611/136‑1
                                                                                                                                                                                       ATCAGTGACATGACAGTAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGT    <  6:175956/138‑1
                                                                                                                                                                                       ATCAGTGACATGAAAGGAATTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGTCTTGGCGGCTTATTGT    <  6:388234/138‑1
                                                                                                                                                                                       ATCAGTGACATGAAAGGAAGTATTTTAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGT    <  4:290454/138‑1
                                                                                                                                                                                       ATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGT    <  4:345992/138‑1
                                                                                                                                                                                       ATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCGTGGCGGCTTATTGT    <  5:316180/138‑1
                                                                                                                                                                                        TCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTAT  >  5:19052/1‑139
                                                                                                                                                                                        TCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTA   <  4:119301/138‑1
                                                                                                                                          ||||||||||||||||||||||||||||||||||||||||||||||||||                                                                                                                                       
GACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  BS168_reference_genome/3486896‑3486759
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTAT  >  pSIJ663_pHT315_araE_xy/9781‑9915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.