New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? BS168_reference_genome 3486759 =0 (0.000)35 (0.020)
+ACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAG		 22/150 0.4 94.3% intergenic (+1/+48) araR/yvbT transcriptional repressor of the ara regulon (LacI family)/putative alkanal monooxygenase
?pSIJ663_pHT315_araE_xy 9781 = 7 (0.000)intergenic (+5050/–) ampR/– –/–

Only 100 of 118 total aligned reads displayed.

ACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  BS168_reference_genome/3486895‑3486759
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTAT  >  pSIJ663_pHT315_araE_xy/9781‑9915
                                                                                                                                         ||||||||||||||||||||||||||||||||||||||||||||||||||                                                                                                                                       
ACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTAC                                                                                                                                                                                         <  1:104445/139‑1
ACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTAC                                                                                                                                                                                         <  8:311919/139‑1
 cgtAATTATTGTTAACTCAGATTCCTTAGAACACGCAGACAGAATGCGTTCGCTTGTACTCATCGCGGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGTCCCATACATTGCTTTTTAC                                                                                                                                                                                         <  8:13459/135‑1
            TTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACA                                                                                                                                                                             <  2:384596/139‑1
            TTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACA                                                                                                                                                                             <  7:51083/139‑1
              AACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACG                                                                                                                                                                           >  3:215461/1‑139
              AACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACG                                                                                                                                                                           >  2:327409/1‑139
                   AGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGAC                                                                                                                                                                      <  5:73076/139‑1
                    GAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACA                                                                                                                                                                     <  5:164476/139‑1
                     AAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGGTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACAC                                                                                                                                                                    <  6:35312/139‑1
                           TTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGTGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTT                                                                                                                                                              >  3:370530/1‑139
                           TTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTT                                                                                                                                                              >  1:38890/1‑139
                           TTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTT                                                                                                                                                              >  4:83761/1‑139
                           TTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTT                                                                                                                                                              >  5:247505/1‑139
                           TTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATAGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTT                                                                                                                                                              >  7:24493/1‑139
                             GAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTG                                                                                                                                                             >  4:343812/1‑138
                               actaGCAGACAGAATGCGTTCGTTTGAAATCTTCGCTGACGTTTGGAAAATCAGATAACAGCTATAATAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAA                                                                                                                                                          <  4:364764/135‑1
                                   GCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGT                                                                                                                                                      >  3:250289/1‑139
                                   GCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGT                                                                                                                                                      <  1:88882/139‑1
                                   GCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGT                                                                                                                                                      >  3:305223/1‑139
                                   GCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGT                                                                                                                                                      >  1:226104/1‑139
                                   GCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACAC                                                                                                                                                                    <  1:188199/125‑1
                                   GCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACAC                                                                                                                                                                    >  2:188199/1‑125
                                    CAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTG                                                                                                                                                     <  7:91279/139‑1
                                           AATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAAT                                                                                                                                               >  2:383425/1‑138
                                             TGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGTGGAGACCCATACATTGCTTATTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTA                                                                                                                                             >  8:293928/1‑138
                                             TGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACAC                                                                                                                                                                    >  1:124917/1‑115
                                             TGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACAC                                                                                                                                                                    <  2:124917/115‑1
                                             TGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGT                                                                                                                                                                                    <  4:390476/99‑1
                                             TGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGT                                                                                                                                                                                    >  3:390476/1‑99
                                               CGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTAT                                                                                                                                            >  1:78160/1‑137
                                                 TTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGT                                                                                                                                        <  5:349088/139‑1
                                                 TTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGT                                                                                                                                                        <  6:3123/123‑1
                                                    GTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGAC                                                                                                                                     <  2:38890/139‑1
                                                    GTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGAC                                                                                                                                     <  2:78160/139‑1
                                                    GTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGAC                                                                                                                                     <  5:90654/139‑1
                                                     TTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTAC                                                                                                                                                                                         <  5:233576/86‑1
                                                     TTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTAC                                                                                                                                                                                         >  6:233576/1‑86
                                                                            GAAAAACAGATAACATCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTTAAAATG                                                                                                              <  6:310162/138‑1
                                                                            GAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATG                                                                                                              <  3:343812/138‑1
                                                                              AAAACATATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG                                                                                                           <  6:376260/139‑1
                                                                                         CAGCTAAAAAAAAAGCAATGTAGCGGGGCGACCCATACATGGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGGGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAAC                                                                                                <  8:283691/139‑1
                                                                                          agaTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTATTTTGAATGTGTGTTAAATTATCAGTGACATGAAAGTAAGTATTTTAAAATGAAGAATACTCCAACT                                                                                               <  1:327409/136‑1
                                                                                                     AAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACC                                                                                    <  2:226104/139‑1
                                                                                                                CGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTG                                                                         >  1:16456/1‑139
                                                                                                                     AGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCACCTCAATTAGAACCAAATGTTCCTGTAAC                                                                     >  2:371471/1‑138
                                                                                                                     AGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAC                                                                     >  3:211596/1‑138
                                                                                                                     AGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAC                                                                     >  4:290359/1‑138
                                                                                                                     AGACCAATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAATGGGTGTTAAATTATCAGTGACATGAAAGGAAGTTTTTGAAAATGAAGAATACTCCTACTCAATTAGAACCAAATGTTCCTGTAACA                                                                    <  1:117243/139‑1
                                                                                                                       ACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAC                                                                     >  4:184404/1‑136
                                                                                                                          CATAGATTGCTTTTTACTTCTTCAATACAGGTGGACAGTCTTTTGAAAGTGTGGAAAATTATCAGTTACATCAAAGGAAGTTTTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAG                                                               <  4:305223/139‑1
                                                                                                                              CATTTCTTTTTACTGCGTCAATACCCGTTGACACTATTTTGAAAGTGTTTTAAATTATCAGTGACATGAAAGGAAGTATTTCAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCA                                                            <  1:383425/138‑1
                                                                                                                              CATTGGTTTTTAGTGCGTCATTACACTTTGTCACTCTTTTGAAAGGGGTTTAAATTTTGAGTGACTTGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTATCAAGAAGCCA                                                            <  7:293928/138‑1
                                                                                                                                 TGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTC                                                         >  3:156054/1‑138
                                                                                                                                   CTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAT                                                      >  4:183250/1‑139
                                                                                                                                   CTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAT                                                      >  1:314307/1‑139
                                                                                                                                   CTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAT                                                      >  3:176474/1‑139
                                                                                                                                   CTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATG                                                                                                              >  5:196592/1‑83
                                                                                                                                   CTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATG                                                                                                              <  6:196592/83‑1
                                                                                                                                   CTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGCAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAT                                                      >  4:289224/1‑139
                                                                                                                                      TTTACTGCGTCAATACACGTTGAGACTCTTTTGAAAGTTTTTTAAATTATTAGTGACATGTCAGGAAGTATTTTAAAATTAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAT                                                      <  3:392797/136‑1
                                                                                                                                        TACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGAT                                                 >  3:90938/1‑139
                                                                                                                                            GCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAA                                                                                                                           <  6:364241/61‑1
                                                                                                                                            GCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAA                                                                                                                           >  5:364241/1‑61
                                                                                                                                             CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAATGGAAGTATTTGAAATTGAAGAATACTCGAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGT                                             >  5:215679/1‑138
                                                                                                                                             CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGT                                             >  8:326419/1‑138
                                                                                                                                             CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGT                                             >  1:309755/1‑138
                                                                                                                                             CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGAC                                                                                                                                     <  5:11995/50‑1
                                                                                                                                             CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGAC                                                                                                                                     >  6:11995/1‑50
                                                                                                                                                     CACGTTTAAACTATTTTGAATGTGTGTTAAATTATCATTGACATGAAAGGATGTATTTTAAATTGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAT                                    <  2:16456/139‑1
                                                                                                                                                        GTTGACCCTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGATGAATACTCAAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATGTGGCATGTTGATCT                                  >  7:99747/1‑138
                                                                                                                                                          TGACACTCTTTTGAAAGTTTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAT                                    <  7:335138/134‑1
                                                                                                                                                          TGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCAT                               >  1:56136/1‑139
                                                                                                                                                          TGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCAT                               >  5:250195/1‑139
                                                                                                                                                          TGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAT                                    >  8:335138/1‑134
                                                                                                                                                            ACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATG                              <  4:90938/138‑1
                                                                                                                                                                 CTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCG                          >  8:224420/1‑137
                                                                                                                                                                  TTTTGAAAGTTTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGG                         <  1:318808/137‑1
                                                                                                                                                                  TTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCG                       >  2:98054/1‑139
                                                                                                                                                                  TTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGG                         <  7:224420/137‑1
                                                                                                                                                                  TTTTGAAAGTGTGTTAAATTATCAGTCACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGG                         <  3:133181/137‑1
                                                                                                                                                                  TTTTGAAAGTGTGTTAAATACTCAGTCACATGAAAGGAAGTATTTGAAAATCACGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGG                         <  3:209100/137‑1
                                                                                                                                                                    TTGAAAGTGTGTTAAATTATCAGTGACATGAAAGCAATTATTTCAAAATGACCAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGG                         <  4:211596/135‑1
                                                                                                                                                                         AGTGTGTTAAATTATCAGTGACATTAAAGGAAGTATTTTAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTG                <  6:196450/139‑1
                                                                                                                                                                         AGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTG                <  3:184404/139‑1
                                                                                                                                                                          GTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGG               <  8:15079/139‑1
                                                                                                                                                                            GTGTTTAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGTCGGGGCTTGGCG             >  4:70726/1‑139
                                                                                                                                                                            GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCG             >  5:109671/1‑139
                                                                                                                                                                            GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCG             >  2:239561/1‑139
                                                                                                                                                                            GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCG             >  7:359042/1‑139
                                                                                                                                                                            GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCG             >  6:209402/1‑139
                                                                                                                                                                             ttTTAAATTATATGTCACATGAAAGTAATTATTTGAAAATCACCAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCG             <  6:250195/136‑1
                                                                                                                                                                             TGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGG            >  3:119630/1‑139
                                                                                                                                                                               TTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCT          <  3:290359/139‑1
                                                                                                                                                                               TTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGC           <  2:242315/138‑1
                                                                                                                                                                               TTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGC           <  6:109671/138‑1
                                                                                                                                                                               TTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGC           <  2:309755/138‑1
                                                                                                                                                                                TAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCT          <  4:119630/138‑1
                                                                                                                                                                                       TCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTAT  >  1:94985/1‑139
                                                                                                                                                                                       TCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGAGGGGCTTGGCGGCTTATTGTAT  >  5:352710/1‑139
                                                                                                                                         ||||||||||||||||||||||||||||||||||||||||||||||||||                                                                                                                                       
ACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  BS168_reference_genome/3486895‑3486759
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTAT  >  pSIJ663_pHT315_araE_xy/9781‑9915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.