| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | pSIJ663_pHT315_araE_xy | 3,843 | Δ5 bp | intergenic (+128/‑24) | eryR → / → ampR | –/– |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | pSIJ663_pHT315_araE_xy | = 3842 | 42 (0.010) | 6562 (1.310) | 213/248 | 0.0 | 99.4% | intergenic (+127/‑29) | eryR/ampR | –/– |
| ? | pSIJ663_pHT315_araE_xy | 3848 = | 40 (0.010) | intergenic (+133/‑23) | eryR/ampR | –/– | |||||
Only 100 of 6573 total aligned reads displayed.
GGGAGGAAATAATTCTATGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > pSIJ663_pHT315_araE_xy/3704‑3842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG > pSIJ663_pHT315_araE_xy/3848‑3984 GAGGAAATAATTCTATGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGG < 6:227744/139‑1 AATAATTCTATGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACA < 7:345851/139‑1 TAATTCTATGAGTCGATTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATT < 5:251334/139‑1 TATGAGTAGTTTTTTTAAATTTTTAAATTTACACTTTAATAAAGGTAATGGAGATAAATTATTAGATATACTACTGACAGCTTCAAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAA < 2:396276/138‑1 TGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 6:134015/139‑1 TGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCCACGGGGAATTTGGGGTACATTGAAAAAGG < 8:158218/139‑1 GAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 7:284409/138‑1 GAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTACAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 5:301887/138‑1 AGTCTCTTTTTTAATTTTGGAAATTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTGCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGA < 5:224431/138‑1 AGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGA < 6:161500/138‑1 TTTTAAATTTGGAAAGTTACACGTTACTAAAGGTAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATG < 1:229517/138‑1 TTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTAT < 7:178860/137‑1 TTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTAT < 2:251237/137‑1 TTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTAT < 3:279238/137‑1 TTTAAATTTGTAAAGTTACACGTTACTATAGGGAATGGACTTAAATTATTAGATATACTACTGACCGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGA < 7:101202/138‑1 AATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATT < 1:66455/139‑1 TGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAA < 5:11637/138‑1 GGAAAGATACACGTTACTAAAGGCAATGGAGATAAATAATAAGAAATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCACTATCGCCTACCGCGAATTTGGCGTACAATGAAAAAGCAAGAGTATGAGTATACAAC > 4:349842/1‑138 ctCGTTACTAAAGGGTATGGAGATAAATTATTAGATTTACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGT < 7:371463/137‑1 CGTTACTAAAGGGTATGGATATAAATTATTAGAAATACAACTGACAGCTTCAAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCG < 4:19659/139‑1 CTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCT > 6:187952/1‑138 ggtAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCC < 3:74716/136‑1 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGTTCCATAGCGCCAACGGGGAATTTGGGGTACTTTGAAAAAGGAAGAGTAGGAGTATTCAACTTTTCCGTGTCGCCGTAATTCCCTT > 8:300832/1‑139 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTT > 7:225264/1‑139 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTT > 8:272144/1‑139 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGT < 4:104495/124‑1 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATT < 6:374948/110‑1 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATT > 4:228379/1‑110 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTA < 4:290458/108‑1 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTAT > 8:239779/1‑103 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAA > 1:123619/1‑97 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 1:368445/95‑1 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAA > 7:130434/1‑93 ATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT > 5:170777/1‑139 TGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTT > 2:217923/1‑139 TGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGT < 6:106859/122‑1 TGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATT < 4:168065/108‑1 AGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGATAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTG > 8:73125/1‑139 AGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTAT < 7:93731/98‑1 GATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGC < 3:354736/139‑1 ATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG > 1:315289/1‑139 ATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCG < 7:312073/119‑1 AATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCA > 3:216954/1‑139 AATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGT > 6:73700/1‑114 AATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAG > 3:188262/1‑90 TTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTG > 2:71021/1‑139 AGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCC > 5:193178/1‑139 GATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCT < 5:276186/139‑1 TATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTC > 5:356511/1‑139 TACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT > 7:154992/1‑139 TACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT > 3:328302/1‑139 TACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCG < 6:316471/104‑1 TACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 3:300234/73‑1 TACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG > 4:134118/1‑73 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTCGCGCCTCCGGGGAATTTGGGGTACATTGATATAGGAAGAGTATGAGTATTCAACTTGTCCGAGTCGCCCTTATTCCCTATTTTGCGGCATTTTGACTTCGTG > 4:87851/1‑139 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGTGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTG > 2:312159/1‑139 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTG > 5:143144/1‑139 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTG > 5:79930/1‑139 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTG > 7:41821/1‑139 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCC < 7:67190/106‑1 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAG < 4:257729/77‑1 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 5:383402/72‑1 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG > 2:2832/1‑72 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG > 2:183744/1‑72 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACA > 8:369770/1‑62 TACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCTGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTT > 4:384019/1‑139 TGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG > 4:52997/1‑67 ACAGCTTCCAAGAAGCTAAATAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGAGTCGACCATAATACCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGC > 2:127308/1‑139 ACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGC > 2:154593/1‑139 ACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACA < 3:104069/85‑1 ACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTA < 1:28501/78‑1 ACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTAAGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGAATTTTGCCTTCATGTTTTTGC > 7:198953/1‑139 CTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCAC > 1:14594/1‑139 TTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCTGCATTTTGCCTTCCTGTTTTTGCTCACC > 6:42467/1‑139 TTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGT > 6:284710/1‑89 CCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGATAAAGGAAGAGAATGAGTATTCAACATTTCCGTGTCGCCCATATTCCCTATTTTTCGGAATTTTGCATTCCTGTATTTGCTCACC > 4:323223/1‑137 CAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAG < 3:48167/139‑1 GCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGC > 8:43852/1‑139 AGAGGTCCCTAGCGCCTACGGGGAATTTGGTGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACTCTGGTG < 8:18828/139‑1 GAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTACTGTTTTTTCTCACCCATAAACGCTGGTG > 3:129405/1‑138 aCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCGTTATTCCCTTTTTTGCGGCATTTTGCGTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA > 8:335054/2‑138 CCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA > 6:259152/1‑138 CCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTGTTTGCTCACCCAGAAACGCTGGTGAAAGTA > 8:123840/1‑138 TAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCCGAAACGCTGGTGAAAGTAA > 1:172847/1‑137 TAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATG < 3:245622/46‑1 AGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGACTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAA > 3:155955/1‑136 GCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGA < 1:10032/139‑1 GCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGA < 5:33142/139‑1 GCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATG < 8:212157/139‑1 CCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCGACATGTCCCTGTCGCCCTTATTCCCTTTTTTTCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGGGAAAGTAAAAGATGC > 5:52476/1‑139 CCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGC < 2:344490/139‑1 CCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCA < 1:96031/86‑1 TACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT < 3:379499/105‑1 ACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTACCTTTTTTGCGTCATTTTGCGTTCGTGTTTTTGATCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTG > 1:340511/1‑138 CGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTG < 1:393988/137‑1 GGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAG < 7:258258/139‑1 GGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAG < 1:198444/139‑1 TTTGGGGTACATTGAAAAAGGAAGAGTATGGGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTTAAAGATGCTTCAGATCAGT > 2:373833/1‑139 TGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTGCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTT < 6:34859/138‑1 TGGGGTAAAATGCAAAAGGAAGAGTTTGATTAATCAACCATTCCGTGTAGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTT < 1:255252/138‑1 GGGAGGAAATAATTCTATGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > pSIJ663_pHT315_araE_xy/3704‑3842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG > pSIJ663_pHT315_araE_xy/3848‑3984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |