| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | pSIJ663_pHT315_araE_xy | = 5551 | 39 (0.010) | 4946 (1.020) | 203/240 | 0.0 | 99.2% | intergenic (+820/–) | ampR/– | –/– |
| ? | pSIJ663_pHT315_araE_xy | 9889 = | NA (NA) | intergenic (+5158/–) | ampR/– | –/– | |||||
Only 100 of 5163 total aligned reads displayed.
AGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGTTATGACACAAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTCGAAACAAACGCATTTGACCAAACAAGCAGACAAAA > pSIJ663_pHT315_araE_xy/5413‑5689 | gTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTg > 2:124094‑M1/1‑138 (MQ=255) ccTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcg > 6:397253‑M1/1‑136 (MQ=255) cTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATTCTCGTCAGGGGGGCCGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTACTTGCCTTTTGCTTGCCTTTTGCTCACATGTgcgg > 8:19474‑M1/1‑135 (MQ=255) tGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTTATGCTCGTCAGGGGGGCGGAGCCAATGGAAAAACGCCACCAACGCGGCCATTTTACGGTTCCGGGCCGTTTGCTGGCCTTTTGCTCACATGTgcggc > 6:74615‑M1/1‑134 (MQ=255) tGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggc > 3:38156‑M1/1‑134 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTTTGATGCACGTCAGGGGGGCGGCGCCTATGGAAAAACGCCCCCAACGCGGCCGTGTTACCGGTCCAGGCCGTTTGCTGGCCTATTGCTCACATGTgaggcgg > 4:86246‑M1/1‑132 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCCACGCGGCCGTTTTACGGTTCCTGGCCTTTTGCTGGCCGTTTGCTCCCATGTgcggcgg > 6:220391‑M1/1‑132 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTcc > 7:381887/1‑139 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCGATGGAAAAACGCCAGCCCCGCGGCCGTTTTACGGTTCCTGGCCGTTTGCTGGCCGTTTGCGCCCATGTgcggcgg > 8:10898‑M1/1‑132 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGGCGAGTTTTGTGAATCGCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgctgcgg > 3:154633‑M1/1‑132 (MQ=255) aaccaacctctGACTTTAGCTTAAATTTTTTTAATGATCGTAAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttgg > 8:374484‑M1/6‑125 (MQ=255) cGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttgg < 1:213911‑M1/138‑15 (MQ=255) cGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCGCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttgg < 3:105126‑M1/138‑15 (MQ=255) gCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcg < 2:7488‑M1/139‑17 (MQ=255) gacCTCTTACTTGAGCGTCGTTTTTTTTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggc < 5:350062‑M1/138‑19 (MQ=255) aCCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 1:100625‑M1/139‑20 (MQ=255) aCCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 7:212143‑M1/139‑20 (MQ=255) aCCCCTGACTTGAGCGTCGATTTTTGGGATGCTCGTCAGGGGGGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 1:240869‑M1/139‑20 (MQ=255) ccgctgccTTGCGCGTCGATTTTGGTGATGCTCGTCAGGGGGGCGGAGCCTAGGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctt < 1:185949‑M1/136‑21 (MQ=255) ctctGACTTGAGCGTCGATTTTTGTGATGCTCGTCTGGGGGGCGGTGCCTATGTAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctta < 3:308807‑M1/139‑22 (MQ=255) ctctGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctta < 8:70937‑M1/139‑22 (MQ=255) ctctGACTTGAGCGGCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctta < 3:328718‑M1/139‑22 (MQ=255) tGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAAAGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttgg > 4:302162‑M1/1‑115 (MQ=255) cctggtgcgtcgaTTTTGGTGAGGCTCGTGAGGGGGGCGGAGCCTATGTAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTGAGATGTgcggcggggcttggcggcttattgta < 5:378333‑M1/133‑27 (MQ=255) aCTTGAGCGTCTATTTTTGTGATGCTCGTCTGGGGGGCGGAGCATATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 1:95679‑M1/138‑26 (MQ=255) aCTTGAGCGTCGATTTTTTTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgta > 4:274318‑M1/1‑113 (MQ=255) aCTTGAGCGTCGATTTTTGTGATGCTCGTCTGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgta < 7:236605‑M1/139‑27 (MQ=255) aCTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 3:282704‑M1/138‑26 (MQ=255) aCTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 7:127500‑M1/138‑26 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggc < 4:356898‑M1/138‑31 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 1:264931‑M1/133‑26 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttg > 3:174300‑M1/1‑108 (MQ=255) cGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctat > 4:381913‑M1/1‑106 (MQ=255) tCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatga > 7:49498‑M1/1‑104 (MQ=255) gATTTTTGTGCTGCTCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCACCGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgaca < 5:167490‑M1/139‑38 (MQ=255) tgtgATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggca < 8:27453‑M1/138‑43 (MQ=255) tgtgATGCGCGTCAGGGGGGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggca < 3:221579‑M1/138‑43 (MQ=255) cGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgta > 7:351323‑M1/1‑87 (MQ=255) gTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcgggtcttggcggcttattgtatggctatgacacggcagtgatttctg < 8:222601‑M1/138‑53 (MQ=255) gggCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcg < 7:187454‑M1/85‑7 (MQ=255) ggCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctg > 7:264600‑M1/1‑78 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacgg < 7:159205‑M1/116‑41 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtat < 8:130682‑M1/103‑28 (MQ=255) aGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttcaggcgccatcggtttt > 8:337651‑M1/1‑73 (MQ=255) tATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 5:113545‑M1/139‑71 (MQ=255) aTGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacccggcagtgatttctggcgccatcggttttctga > 6:163131‑M1/1‑68 (MQ=255) aTGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggc < 3:254943‑M1/83‑16 (MQ=255) tgtaaacacgcCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 1:156477‑M1/134‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccctcggttttctgg > 2:260356‑M1/1‑67 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 1:127536‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 3:129655‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCGTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggt > 4:242358‑M1/1‑67 (MQ=255) aaaaCGCCAGCAACGCGGCCTTTTTTCGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagat < 1:325724‑M1/138‑76 (MQ=255) aaaaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatt > 6:318082‑M1/1‑63 (MQ=255) aaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggcta > 6:101596‑M1/1‑61 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 7:76782‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttaca > 8:44642‑M1/1‑59 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga > 5:328197‑M1/1‑59 (MQ=255) ccAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga > 5:27820‑M1/1‑57 (MQ=255) ccAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgaca < 5:79250‑M1/94‑38 (MQ=255) gCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 5:198216‑M1/79‑26 (MQ=255) cAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcct < 7:102867‑M1/139‑87 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcgtcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttattcagcctgag < 1:354095‑M1/139‑90 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 5:222629‑M1/139‑90 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 2:293313‑M1/139‑90 (MQ=255) cgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtc > 2:207678‑M1/1‑48 (MQ=255) cgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 1:392418‑M1/67‑20 (MQ=255) tttttACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgttt > 6:343017‑M1/1‑43 (MQ=255) cGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatgga < 6:194584‑M1/138‑102 (MQ=255) cGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatgga < 4:162961‑M1/138‑102 (MQ=255) gTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata > 1:61067‑M1/1‑35 (MQ=255) gTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttg < 6:135164‑M1/48‑14 (MQ=255) ccTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgaca > 3:5047‑M1/1‑32 (MQ=255) ccTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgaca < 4:5047‑M1/69‑38 (MQ=255) ccTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttg < 8:247284‑M1/45‑14 (MQ=255) ttttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatt > 3:195902‑M1/1‑25 (MQ=255) tttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgccacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcattt > 2:172201‑M1/1‑24 (MQ=255) tttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcattt > 5:140909‑M1/1‑24 (MQ=255) tttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatt > 2:46642‑M1/1‑24 (MQ=255) tttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 4:327098‑M1/94‑71 (MQ=255) tttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacac > 6:286879‑M1/1‑24 (MQ=255) tttgctggccttttgctCACATGTgcggcggggcttggcggc < 8:311962‑M1/42‑19 (MQ=255) ttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga > 2:328473‑M1/1‑23 (MQ=255) gctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttca < 3:81898‑M1/138‑118 (MQ=255) gctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttca < 8:160368‑M1/138‑118 (MQ=255) gctggcctttagctCACATGTgcggcggggcttggcggctttttgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttca < 4:186143‑M1/138‑118 (MQ=255) gccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaatatttatacagcctgagtccgtttatggagggacttgtcatttaaagcat > 2:372886‑M1/1‑17 (MQ=255) gccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 5:251206‑M1/106‑90 (MQ=255) gccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 1:295705‑M1/87‑71 (MQ=255) ccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcatt < 6:371651‑M1/139‑124 (MQ=255) ttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatga > 5:306231‑M1/1‑12 (MQ=255) ttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattat < 6:25592‑M1/137‑126 (MQ=255) gctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgat < 7:294336‑M1/138‑129 (MQ=255) acaTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggag < 5:42291‑M1/139‑134 (MQ=255) acaTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattgga < 7:319367‑M1/138‑133 (MQ=255) caTGTgcggcggggcttggcggcttattgtatggctatgccacggcagtgaattcaggcgccctcggttttctgaaagaattatacatcctgaggacgtttattgagggacttggcatttcaagcattatgtttggagg > 4:208439‑M1/1‑5 (MQ=255) caTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggag > 4:110684‑M1/1‑5 (MQ=255) aTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatgga < 3:35494‑M1/105‑102 (MQ=255) tgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 4:139286‑M1/90‑90 (MQ=255) tgcggcgggccttggcgccttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagaccgtatatgcagggacttgtcatttcaagcattatgattggaggagtt > 2:235704‑M1/1‑1 (MQ=255) | AGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGTTATGACACAAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTCGAAACAAACGCATTTGACCAAACAAGCAGACAAAA > pSIJ663_pHT315_araE_xy/5413‑5689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |