| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 3,770,066 | (A)8→9 | intergenic (‑258/+38) | ywzF ← / ← csbD | conserved protein of unknown function/stress response protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,770,058 | 1 | . | A | 93.8% | 190.1 / 6.4 | 64 | intergenic (‑250/+46) | ywzF/csbD | conserved protein of unknown function/stress response protein |
| Reads supporting (aligned to +/- strand): ref base . (4/0); new base A (36/24); total (40/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.12e-01 | |||||||||||
ATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGC > BS168_reference_genome/3769929‑3770187 | ataAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATAAATTCAAAGAATATTTAAAAAATTTAGTTACATTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑aaaaaaa > 6:326928/1‑137 (MQ=255)ataAAAGATTACAACATATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑aaaaaaa‑a < 7:291616/138‑1 (MQ=255) gTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAATAGC‑G‑‑aaaaaaa‑aagac > 3:64420/1‑132 (MQ=255) gTTTACAACTTATGTCATCATTATATAGAAGAGGCCGATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGAACAAATCAGCTTCTTTTTTTGTTATTTTTATTCACATCAGATAAAGA‑G‑‑aaaaaaa‑aagac > 7:227199/1‑132 (MQ=255) ttACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGa > 7:47685/1‑138 (MQ=255) tACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGaaa > 4:21974/1‑139 (MQ=255) tACAACTTATGACATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGATACCTTGACCAAATCAGCATCTTTTTTTGTTATATTTATTAACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGaaa > 8:63164/1‑139 (MQ=255) cAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGaaaaa > 4:23550/1‑137 (MQ=255) aTGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACAGTTCGt > 5:295424/1‑139 (MQ=255) tgatgatTATATTGAAGAGGCATATTTATTCTAAGAATATTTAAAAAATTTTGTTAACTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGTAAAATC‑GA‑AAAAAAA‑A‑GACAAGAAAGATTTCGTTTc < 8:78544/134‑1 (MQ=255) tcatcaTTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTc < 1:3001/139‑1 (MQ=255) atcatTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GAAAAAAAAA‑A‑GACAAGAAACATTTCGTTTcc < 6:152658/139‑1 (MQ=255) atcatTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTc > 6:343022/1‑137 (MQ=255) atcatTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTc < 5:343022/137‑1 (MQ=255) catTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGc > 4:166262/1‑139 (MQ=255) catTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTAACATAAGAAAAATCTA‑‑AAAAAAA‑A‑GACAAGAAACATTACGTTTCCTGc > 2:276610/1‑139 (MQ=255) aatatctaGAAGAGGCTTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑TACAAGAAACATTTCGTTtgctgc < 6:112415/136‑1 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAACACGC‑GA‑AAAAAAA‑A‑GCCAAGAAGCATTTCGTTGCCGGCGTCTTCCGTa > 2:142916/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg > 6:224329/1‑137 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg < 5:224329/137‑1 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 2:189638/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 7:175644/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 2:89192/1‑139 (MQ=255) gagGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCTA‑‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTAc > 6:53439/1‑138 (MQ=255) gagGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTAc > 8:33660/1‑138 (MQ=255) atgacTATTAATTCAAAGAATATTTAAAAAATTTAGTTAAATTTAAAAAAAAAGATTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTAGTTTCCTGACTCTTCCTTACGa > 8:89063/5‑139 (MQ=255) ggCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCGGCGTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 1:246491/1‑139 (MQ=255) gcatATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 7:210098/4‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAACCATTTCGTTTCCTGCCTCTTCCGTACGAt > 4:16654/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGag > 5:19540/1‑137 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 1:185750/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 6:79142/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 2:17863/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 7:29120/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 3:223815/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 8:124598/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 3:313149/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 4:12112/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 5:285398/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACC‑AATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAtt > 5:101533/1‑138 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCt > 5:329096/1‑139 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑AAAAAAACA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTATTCt > 4:36007/1‑139 (MQ=255) aaTTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCtt < 1:343235/138‑1 (MQ=255) cAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCTCATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGc < 1:112355/113‑1 (MQ=255) cAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCTCATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGc > 2:112355/1‑113 (MQ=255) atTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGttt < 6:78870/100‑1 (MQ=255) atTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGttt > 5:78870/1‑100 (MQ=255) tttAGTTACCTTGACC‑AATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCtt < 6:101533/139‑1 (MQ=255) ttAGTTACCTTGAGCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCATAAAAAGC‑GA‑AAAAAAA‑A‑TACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCt < 8:79019/138‑1 (MQ=255) gTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTcc < 6:286042/139‑1 (MQ=255) cTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 6:329096/139‑1 (MQ=255) cTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 7:89063/139‑1 (MQ=255) cTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 7:124598/139‑1 (MQ=255) aCCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCt > 8:62260/1‑139 (MQ=255) aCCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCATCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTTGATTTCCCGATATcat > 8:50572/1‑137 (MQ=255) gCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGAttt < 3:166262/139‑1 (MQ=255) gCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGAttt < 8:29120/139‑1 (MQ=255) tttttGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCtt < 7:7182/138‑1 (MQ=255) tttttGTTATATTTATTCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCt < 8:210098/137‑1 (MQ=255) ttCACATCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCttttt < 2:33257/138‑1 (MQ=255) caTCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCt > 2:274220/1‑139 (MQ=255) caTCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCt > 7:158330/1‑139 (MQ=255) aTCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTAt < 2:215156/127‑1 (MQ=255) aTCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTAt > 1:215156/1‑127 (MQ=255) aTCAGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt < 4:223815/139‑1 (MQ=255) tCAGAAAAAGC‑G‑‑AAAAAAA‑ATGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 7:237561/1‑138 (MQ=255) aGAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCa < 2:185750/138‑1 (MQ=255) gAAAAAGC‑GA‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGc < 3:23550/139‑1 (MQ=255) | ATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGC‑G‑‑AAAAAAA‑A‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGC > BS168_reference_genome/3769929‑3770187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |