| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 4,155,395 | (A)5→6 | intergenic (‑186/+38) | trnY‑Lys ← / ← purA | tRNA‑Lys/adenylosuccinate synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 4,155,390 | 1 | . | A | 97.7% | 305.4 / ‑0.2 | 87 | intergenic (‑181/+43) | trnY‑Lys/purA | tRNA‑Lys/adenylosuccinate synthetase |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base A (37/48); total (38/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.70e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
GTTCTCATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAAC‑AAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGTCAG > BS168_reference_genome/4155253‑4155519 | gTTCTCATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTcaaac‑a < 6:138117/139‑1 (MQ=255)gTTCTCATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTAAAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTAAGACCAACTTATATGCGGCTTTcaaac > 1:134620/1‑138 (MQ=255) ttCTCATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTcaaac‑a > 5:29386/1‑138 (MQ=255) aTCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCaaac‑aaaaaa > 7:229915/1‑137 (MQ=255) aTCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCaaac‑aaaaaa > 8:183431/1‑137 (MQ=255) aTCTTGTACTCTATTGAACCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTATT‑GG‑TTTTTTTTCATATTTTTTTCTAAGACCAACTTATATGCGGATTTCaaac‑aaaaa‑c > 2:291098/1‑138 (MQ=255) gTACTCTTTTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCaaac‑aaaaaacaa < 5:51071/136‑5 (MQ=255) gTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCTGCTTTCAAACAAAAAA‑CAAGcc > 1:282291/1‑139 (MQ=255) gTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCaaac‑aaaaaacaa < 3:278819/136‑5 (MQ=255) gTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCaaac‑aaaaaacaa < 3:259835/136‑5 (MQ=255) gTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCaaac‑aaaaaacaa < 1:83321/136‑5 (MQ=255) gTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCaaac‑aaaaaacaa < 8:220428/136‑5 (MQ=255) gTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCaaac‑aaaaaacaa < 8:102139/136‑5 (MQ=255) gTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGcc > 7:252284/1‑139 (MQ=255) gTAATCTTTTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCaaac‑aaaaaacat < 8:156603/136‑5 (MQ=255) ctctATTGAAGCAGTTTGCGTTACAACGAGATTTATAATATCACGAAGAAATAGATGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACAAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGcccc < 4:180900/138‑1 (MQ=255) ctctATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGcccc < 7:54066/138‑1 (MQ=255) tATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTa > 3:59310/1‑138 (MQ=255) aTTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTaaa > 5:120972/1‑139 (MQ=255) ttGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTaaa > 1:178002/1‑138 (MQ=255) gcaGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑GTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCGTTCAAACAAAAAA‑CAAGCCCCTTAAATa < 7:92465/136‑1 (MQ=255) aGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAggg < 6:120972/139‑1 (MQ=255) gCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAgggg < 8:69773/139‑1 (MQ=255) gTTTCCGTAACAACGATATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGcccc < 3:172276/125‑1 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GGTTTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCt > 8:226031/1‑139 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCaaac‑aaaaaacaa > 5:61513/1‑116 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCaaac‑aaaaaacaa < 6:61513/120‑5 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGcccc < 6:143091/125‑1 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGcccc > 5:143091/1‑125 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGcccc > 4:172276/1‑125 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCtt > 3:69943/1‑139 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCtt > 8:58092/1‑139 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCtt > 7:301745/1‑139 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCtt > 6:142829/1‑139 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCtt > 7:116048/1‑139 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATACGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCtt > 4:215399/1‑139 (MQ=255) tttCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTg < 6:143862/139‑1 (MQ=255) tCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GGTTTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTg < 7:226031/138‑1 (MQ=255) gTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGAc < 6:172625/139‑1 (MQ=255) gTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGAc < 6:267347/139‑1 (MQ=255) gTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGAc < 5:32429/139‑1 (MQ=255) gTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGAc < 8:301745/139‑1 (MQ=255) acaaaGATATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACAAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACat < 5:266213/138‑1 (MQ=255) caacGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACatat < 5:232230/139‑1 (MQ=255) aacGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACactgt < 3:66616/139‑5 (MQ=255) taTTTATAATATCACTAACAAATAGAAGTGGCTATATGTTTTTT‑GG‑TTTTTTTTTATATTTTTTTCTCAGACCAAGTTATATGGGGCTTTCAAACAAAAAA‑AAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTAt < 2:282291/137‑1 (MQ=255) ataataTCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATACGGGCTTGCAGACATATTCTATTTAGtt > 8:95526/1‑139 (MQ=255) atctCACGAACAAATACAAGTGGCAATAACTTTTTT‑GG‑CTTTTTTTCATATTTTTTTCTCAGAGCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 1:291098/136‑1 (MQ=255) atatCACTAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGCCCAAATTATATGCGGCTTTCAACCAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 3:40199/139‑1 (MQ=255) atatCACGAAGAAATAGATGGGGCAATAAGTTTTTT‑GG‑TTTTTTTTCTTATTTTTTTCTCAGACAAAATTTTATGGGGCTTTCAAACAAAAAA‑CAAGCCGCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 2:134620/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 6:34694/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 6:29386/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 5:39349/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 5:125310/139‑1 (MQ=255) atatCACGAACAAATAGAAGGGGCAATAACTTTTTT‑GG‑TTTATTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCATAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 5:132446/139‑1 (MQ=255) tatCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GGTTTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 3:338339/139‑1 (MQ=255) tatCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGAc > 8:53998/1‑120 (MQ=255) tatCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGAc < 7:53998/120‑1 (MQ=255) tCACGAACAAATATAAGTGGAAATACCTTTTTT‑GG‑TTTTTTTTAATATTTTTTTCTCATACAAACTTATATGCGGCTTTAAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCAc < 2:178002/138‑1 (MQ=255) tCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGCCCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACg > 4:56493/1‑139 (MQ=255) tCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACg > 5:251693/1‑139 (MQ=255) tCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACg > 3:73561/1‑139 (MQ=255) cGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTg < 5:289617/110‑1 (MQ=255) cGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTg > 6:289617/1‑110 (MQ=255) cGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACg > 7:295127/1‑136 (MQ=255) cGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACg < 8:295127/136‑1 (MQ=255) aTAGAAGTGGCAATAACTTTTTT‑GGTTTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTg > 4:243062/1‑104 (MQ=255) aTAGAAGTGGCAATAACTTTTTT‑GGTTTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTg > 4:247764/1‑104 (MQ=255) aTAGAAGTGGCAATAACTTTTTT‑GGTTTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTg < 3:247764/104‑1 (MQ=255) aTAGAAGTGGCAATAACTTTTTT‑GGTTTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTg < 3:243062/104‑1 (MQ=255) aGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCg < 3:28802/139‑1 (MQ=255) gAAGTGGCAATAACTTTTTTGGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCg < 1:118410/139‑1 (MQ=255) gTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAg > 1:120005/1‑138 (MQ=255) gTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAg > 2:280338/1‑138 (MQ=255) ggCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATAtt > 5:104624/1‑105 (MQ=255) ggCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATAtt < 6:104624/105‑1 (MQ=255) gCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAAC‑AAAAATCAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGt < 6:193986/113‑1 (MQ=255) gCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAAC‑AAAAATCAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGt > 5:193986/1‑113 (MQ=255) tttt‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGGTTTCAAACAAAAAA‑CAAGCCCCTTAAATAgg < 4:48859/78‑1 (MQ=255) tttt‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CATGCCCCTTAAATAgg < 4:44180/78‑1 (MQ=255) tttt‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAgg > 3:48859/1‑78 (MQ=255) tttt‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAgg > 3:44180/1‑78 (MQ=255) tttt‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGAc > 1:18248/1‑89 (MQ=255) tttt‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGAc < 2:18248/89‑1 (MQ=255) tt‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTATTTTGATCTGTAAACACTGCGAAGGACATttgtttgtta < 8:117229/138‑3 (MQ=255) tt‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGa < 4:73561/138‑1 (MQ=255) tt‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGATTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGa < 8:252284/138‑1 (MQ=255) tttttttCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACag < 5:142829/139‑1 (MQ=255) tttCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAgaga < 7:183431/138‑1 (MQ=255) tttCTCAGACCAACTTATATGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAgaga < 7:13455/138‑1 (MQ=255) atatGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGaa < 6:251693/137‑1 (MQ=255) atGCGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGcc > 5:130396/1‑139 (MQ=255) cGGCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGt < 6:130396/139‑1 (MQ=255) gCTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGt > 7:42517/1‑137 (MQ=255) cTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGa < 3:161614/121‑1 (MQ=255) cTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGa > 4:161614/1‑121 (MQ=255) cTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGTCAg > 2:209740/1‑139 (MQ=255) cTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGTCAg > 5:131826/1‑139 (MQ=255) cTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGTCAg > 6:297170/1‑139 (MQ=255) cTTTCAAACAAAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCATGTCAg > 1:317116/1‑139 (MQ=255) | GTTCTCATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTT‑GG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTCAAAC‑AAAAA‑CAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGTCAG > BS168_reference_genome/4155253‑4155519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |