| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 4,155,395 | (A)5→6 | intergenic (‑186/+38) | trnY‑Lys ← / ← purA | tRNA‑Lys/adenylosuccinate synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 4,155,390 | 1 | . | A | 99.0% | 352.3 / ‑3.4 | 97 | intergenic (‑181/+43) | trnY‑Lys/purA | tRNA‑Lys/adenylosuccinate synthetase |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base A (37/59); total (37/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
GTTCTCATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAAC‑AAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGTCAG > BS168_reference_genome/4155253‑4155519 | gTTCTCATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTc‑aaac‑a < 2:153672/139‑1 (MQ=255)gTTCTCATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTc‑aaac > 1:195211/1‑138 (MQ=255)gTTCTCATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTc‑aaac > 7:130341/1‑138 (MQ=255) ttCTCATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTc‑aaac‑a > 4:86613/1‑138 (MQ=255) ctcATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCAAATTTTTTTATCAGACCAACTTATATGCGGCTTTc‑aaac‑aaa > 8:29362/1‑138 (MQ=255) aTCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑aaac‑aaaaaa > 4:75922/1‑137 (MQ=255) tGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑aaac‑aaaaaacaag < 2:235380/138‑6 (MQ=255) gTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑aaac‑aaaaaacaa < 4:196726/136‑5 (MQ=255) gTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑aaac‑aaaaaacaa < 4:109313/136‑5 (MQ=255) gTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGc < 3:75922/138‑1 (MQ=255) ctctATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGcccc < 1:155110/138‑1 (MQ=255) ctctATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGcccc < 5:30937/138‑1 (MQ=255) tATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGGTTTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCtt > 5:181645/1‑138 (MQ=255) tATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTa > 5:291135/1‑138 (MQ=255) ttGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTaaa > 8:214790/1‑138 (MQ=255) ttGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTaaa > 5:15282/1‑138 (MQ=255) gAAGCAGTTTCCTTAACAACGAGATTTATAATATCACGAACAAATAGAAGTTGCAATAACTTTTTTTG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATa < 1:217616/138‑1 (MQ=255) gAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATa < 2:320323/138‑1 (MQ=255) gAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATa < 3:293866/138‑1 (MQ=255) aaGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGcccc > 5:321395/1‑130 (MQ=255) aaGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGcccc < 6:321395/130‑1 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCtt > 6:247449/1‑139 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCtt > 8:155380/1‑139 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCtt > 3:226028/1‑139 (MQ=255) gTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCtt > 4:103946/1‑139 (MQ=255) tttCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTg < 2:195211/139‑1 (MQ=255) tttCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTg < 3:317561/139‑1 (MQ=255) ttCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGcccc > 5:132717/1‑123 (MQ=255) ttCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGcccc < 6:132717/123‑1 (MQ=255) ttCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTg > 6:229608/1‑138 (MQ=255) gTAACAACGATATTTATAATATAACGAACAAATCGAAGTGTCAATAAATTTTTTTG‑TTTTTTTTCATATTTTTTTCTCAGAACAAATTATATGCTGCTTTCAAAAA‑AAAAACAAGCCCATTAAATAGGGGCTTGCAGAc < 3:21533/139‑1 (MQ=255) gTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGAc < 3:169175/139‑1 (MQ=255) gTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGAc < 8:154433/139‑1 (MQ=255) gTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGAc < 4:226028/139‑1 (MQ=255) acaacGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACat < 4:100411/138‑1 (MQ=255) acaacGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACat < 3:25946/138‑1 (MQ=255) aacGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATAtt < 8:163372/139‑1 (MQ=255) cGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTg > 4:37272/1‑127 (MQ=255) cGAGATTTATAATAACACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGCGGCTTGCAGACATATTc > 4:210905/1‑138 (MQ=255) agaTTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑aaac‑aaaaaacaa > 1:72812/1‑101 (MQ=255) agaTTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑aaac‑aaaaaacaa < 2:72812/105‑5 (MQ=255) ataataTCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGt < 7:155380/138‑1 (MQ=255) ataataTCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGt > 2:276850/1‑138 (MQ=255) atatCACTAACAAATAGAAGTGGCAATAAGTTTTTTGG‑TTTTTTTTCATTTTTTTTTCTCAGACCAACTTATTTGAGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 6:208888/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTTGGTTTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTc < 6:181645/138‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 7:90004/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 6:15282/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 1:225162/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 6:165281/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 6:187079/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 3:86613/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 3:219813/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 6:77950/139‑1 (MQ=255) atatCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTAATTTTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCGCTTAATTAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 7:29362/139‑1 (MQ=255) ataaCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 3:210905/139‑1 (MQ=255) agatCACGAACAAATAGAAGTGGCAATAAATTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 5:35157/137‑1 (MQ=255) tatCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCa < 3:103946/139‑1 (MQ=255) tCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCAc < 5:247449/138‑1 (MQ=255) tCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACg > 8:118068/1‑139 (MQ=255) tCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGAACg > 5:163691/1‑139 (MQ=255) tCACGAACAAATAGAAGTGGCAATAACTATTATTC‑TTTTTTTACAAAAATTTTTCTCAGACCAACTTATATGCCTCTTAC‑AAACAAAAAACAAACCCCTTAAATACTCTCTTTCATACATATTCTATTTAGTTCTCACg > 8:19606/1‑139 (MQ=255) cACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCAc > 1:184932/1‑137 (MQ=255) cACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCAc < 2:184932/137‑1 (MQ=255) aCGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACgg > 2:300714/1‑138 (MQ=255) cGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTa > 8:54573/1‑139 (MQ=255) cGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTa < 1:276850/139‑1 (MQ=255) aaCAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTaca < 8:313671/139‑1 (MQ=255) cAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTacaca < 5:240739/139‑1 (MQ=255) cAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTAC‑AAACAAAAAACAAGCCCCTTAAATCGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTacaca < 3:24683/139‑1 (MQ=255) aTAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc < 5:272453/126‑1 (MQ=255) aTAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGc > 6:272453/1‑126 (MQ=255) aTAGAAGTCGCAATAACATTTTTGG‑TTTTTTATCATATTTTTTTCTCAGACCAACTTATAAGCTTCTTAC‑AAACAAAAAAAAAGCCCCAAAAATAATCGCTTTCAGACAAAAAAAATTTAGTTCTCACGTAacacacct > 6:35157/1‑137 (MQ=255) gAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCg < 2:23138/138‑1 (MQ=255) gAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCg < 6:109/138‑1 (MQ=255) tGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGa > 3:218113/1‑139 (MQ=255) ggCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACCCTGCGAAGGa > 1:324201/1‑138 (MQ=255) ggCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGa > 1:263365/1‑138 (MQ=255) gCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCg < 7:7965/132‑1 (MQ=255) gCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACa > 5:132956/1‑139 (MQ=255) ttGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGa < 4:124597/138‑1 (MQ=255) tGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAATCCCCTTAAATACGGGCTTGCTGACATATTCTATTTAGTTCGCACGGTACACCCTGCGAAGGACATTTGTTTGTGAg < 8:15809/138‑1 (MQ=255) tGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAg < 8:326382/138‑1 (MQ=255) tGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAg < 6:291135/138‑1 (MQ=255) tGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAg < 5:229608/138‑1 (MQ=255) tatTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGAc < 1:300714/139‑1 (MQ=255) tatTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGAc < 2:78473/139‑1 (MQ=255) aCCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTc < 8:173848/75‑1 (MQ=255) aCCAACTTATATGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTc > 7:173848/1‑75 (MQ=255) atatGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGaa < 4:107081/137‑1 (MQ=255) atatGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGaa < 4:125360/137‑1 (MQ=255) atGCGGCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATg > 2:311995/1‑137 (MQ=255) gCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGt > 7:107513/1‑137 (MQ=255) gCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGt > 4:123565/1‑137 (MQ=255) gCTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGt > 6:169593/1‑137 (MQ=255) cTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGaa > 2:188250/1‑129 (MQ=255) cTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGaa < 1:188250/129‑1 (MQ=255) cTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGTCAg > 5:206754/1‑139 (MQ=255) cTTTC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGTCAg > 6:19149/1‑139 (MQ=255) tC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATg > 4:41692/1‑128 (MQ=255) tC‑AAACAAAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATg < 3:41692/128‑1 (MQ=255) | GTTCTCATCTTGTACTCTATTGAAGCAGTTTCCGTAACAACGAGATTTATAATATCACGAACAAATAGAAGTGGCAATAACTTTTTTGG‑TTTTTTTTCATATTTTTTTCTCAGACCAACTTATATGCGGCTTTC‑AAAC‑AAAAACAAGCCCCTTAAATAGGGGCTTGCAGACATATTCTATTTAGTTCGCACGGTACACACTGCGAAGGACATTTGTTTGTGAGCGGTCTGGACCGACAGAGAAAATAGAAAGCGGAATGCCTGTCAG > BS168_reference_genome/4155253‑4155519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |