| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BS168_reference_genome | 3486759 = | 1 (0.020) | 35 (0.030) +ACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAG |
22/150 | 0.3 | 96.7% | intergenic (+1/+48) | araR/yvbT | transcriptional repressor of the ara regulon (LacI family)/putative alkanal monooxygenase |
| ? | pSIJ663_pHT315_araE_xy | 9781 = | 3 (0.000) | intergenic (+5050/–) | ampR/– | –/– | |||||
GCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCGTTAAGATGGCAAGCTTGACAAGTATTTCCGACACATTTAAAATGAAGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGT > pSIJ663_pHT315_araE_xy/9643‑9913 | ttcgtttgaaatcatcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagt > 2:250137‑M2/139‑139 (MQ=255) atcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAgg > 1:81218‑M2/126‑137 (MQ=255) tggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAAt > 4:246242‑M2/114‑139 (MQ=255) gaaaaacacataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATg < 7:336724‑M2/27‑1 (MQ=255) aaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAACGGAAGTATTTGAAAATgacga < 3:55171‑M2/31‑1 (MQ=255) acagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacccgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGACGTATTTGAAAATGAAGAAt < 3:155801‑M2/33‑1 (MQ=255) ataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTc > 2:187054‑M2/103‑139 (MQ=255) ctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTc > 4:88906‑M2/96‑138 (MQ=255) taaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAAtt < 3:246242‑M2/47‑1 (MQ=255) aaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAAc > 7:250533‑M2/88‑139 (MQ=255) agcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAAcc > 1:196356‑M2/86‑138 (MQ=255) agcaatgtagcggggagacccatacattgcttttaactgcgtcattacacgttgacactcttatgaatgtgtgttaaattatcagTGACATGAAAGGAAGAATTTGAAAATGAAGAATACTCCAACTCAATTAGAAcc > 3:58952‑M2/86‑138 (MQ=255) cggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTg < 2:81218‑M2/64‑1 (MQ=255) ggggagaccaataccttgatttttactgcgtcaatacacgttgacactcttttgaaattgtgttaaattatcagTGACATGAAAGGAATTATTTGAAAATGAAGAATACTCCAACTCAATTATAACCAAATGTTCCTGt < 6:170268‑M2/65‑1 (MQ=255) agacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAc > 7:12107‑M2/71‑138 (MQ=255) acccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAc > 7:294519‑M2/69‑136 (MQ=255) acccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAc > 7:254353‑M2/69‑136 (MQ=255) catacattgctttttactgcgtcaatacacgtgtaaactcttttgaaattgttttaaattatcagTCACATGAAAGGAATTATTTGAAAATCAACAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACaagaag < 1:250137‑M2/74‑1 (MQ=255) tacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATgaagaa > 8:227745‑M2/64‑95 (MQ=255) tacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATgaagaa < 7:227745‑M2/32‑1 (MQ=255) tacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGc > 1:219166‑M2/64‑138 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGaaa < 8:85317‑M2/24‑1 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGaaa > 7:85317‑M2/59‑82 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTc > 8:291746‑M2/59‑138 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTc > 4:63182‑M2/59‑138 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTc > 4:101508‑M2/59‑138 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTc > 1:243634‑M2/59‑138 (MQ=255) ccccAGGCGTTAAGCTGGCAAGCTTGACAAGTATTTCCGACCCATTTAAAATGAAGTTTGACATGAAAGGAAGTATTTGATATTGAAGCATCCTCCAACTCATTTAGATCCAAAGGTTCCTGTATCAAGAAGCCATTc > 4:144923/1‑138 (MQ=37) ccccAGGCGTTAAGATGGCAAGCTTGACAAGTATTTCCGACACATTTAAAATGAAGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTc > 7:187435/1‑138 (MQ=255) ctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGa < 8:57583‑M2/22‑1 (MQ=255) ctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGa > 7:57583‑M2/57‑78 (MQ=255) ctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGt < 7:116136‑M2/65‑1 (MQ=255) ctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGt > 8:116136‑M2/57‑121 (MQ=255) ctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAt > 3:72747‑M2/57‑139 (MQ=255) ctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAt > 2:208867‑M2/57‑139 (MQ=255) ctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAt > 3:151085‑M2/57‑139 (MQ=255) ctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAt > 7:77459‑M2/57‑139 (MQ=255) tgcgtcaatacactttcacactctttttaaagtgtgttaaattatcagTGACATGAACGGAAGTATTTTAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTg < 5:333367‑M2/91‑1 (MQ=255) tgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACAGGAAAGGAAGTATTTGAAAATGATGAATACTCCAACTCAATTAGAACCAAATGTTCATGTAACAAGAAGCCATTCAATGGGAGTTg > 6:210816‑M2/49‑139 (MQ=255) cgtcaatacacgttgacactcttttgaaagtgttttaaattatcagTGACATGAAAGTAAGAATTTTAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGt < 8:281766‑M2/92‑1 (MQ=255) cgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGt > 3:105072‑M2/47‑138 (MQ=255) aatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCAtt < 3:88906‑M2/96‑1 (MQ=255) gttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAtct > 8:276878‑M2/36‑138 (MQ=255) gttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAtct > 2:148308‑M2/36‑138 (MQ=255) gttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATCGGATTTGTCATTTTGAtct > 8:143550‑M2/36‑138 (MQ=255) ttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCa > 4:39920‑M2/35‑139 (MQ=255) ttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCa > 4:144736‑M2/35‑139 (MQ=255) acactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCAtgt > 6:148604‑M2/32‑139 (MQ=255) tcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTgcgg > 4:262451‑M2/28‑139 (MQ=255) ttttgaaagtgttttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTgcgg < 7:6518‑M2/112‑1 (MQ=255) ttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGATGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTgcggcg > 6:170567‑M2/26‑139 (MQ=255) ttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTgcggcg > 4:87047‑M2/26‑139 (MQ=255) ttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATCAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTgcggc < 2:219166‑M2/113‑1 (MQ=255) ttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCggg > 1:43209‑M2/24‑139 (MQ=255) agtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTg < 2:43209‑M2/121‑1 (MQ=255) agtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTg < 5:148604‑M2/121‑1 (MQ=255) agtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTg < 3:144736‑M2/121‑1 (MQ=255) gtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTgg > 7:113512‑M2/18‑139 (MQ=255) gtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTgg < 3:158864‑M2/122‑1 (MQ=255) gtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTggcg > 2:273399‑M2/16‑139 (MQ=255) gtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTggcg > 7:282775‑M2/16‑139 (MQ=255) gtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTggcg > 8:36799‑M2/16‑139 (MQ=255) gtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTggcg > 7:118769‑M2/16‑139 (MQ=255) gtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTg < 4:159494‑M2/121‑1 (MQ=255) gtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTg > 3:159494‑M2/16‑136 (MQ=255) ttAAAATGAAGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGCGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTggcggc > 4:23920/1‑139 (MQ=255) ttaacttatcagTGACATTAACGTAATTATTTTAAATTCAAGAATACTCCAACTCAATTAGAACCCAATTTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCt < 5:210816‑M2/127‑1 (MQ=255) ttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTggcggc < 8:250533‑M2/126‑1 (MQ=255) taaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCt < 3:325414‑M2/127‑1 (MQ=255) aattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTa < 1:208867‑M2/129‑1 (MQ=255) ttatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTg < 7:54640‑M2/132‑1 (MQ=255) tatcagTGACATGAAAGGAAGTATTTGAAAATGACGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGt < 8:294519‑M2/133‑1 (MQ=255) atccgTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGt < 3:101508‑M2/133‑1 (MQ=255) atcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGt < 8:113512‑M2/133‑1 (MQ=255) | GCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCGTTAAGATGGCAAGCTTGACAAGTATTTCCGACACATTTAAAATGAAGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGT > pSIJ663_pHT315_araE_xy/9643‑9913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |