Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 3,723,022 G→A intergenic (‑136/‑165) U712_19190 ← / → U712_19195 PTS system sucrose‑specific EIIBC component/putative transporter ywcJ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068813,723,0220GA99.2% 820.3 / NA 241intergenic (‑136/‑165)U712_19190/U712_19195PTS system sucrose‑specific EIIBC component/putative transporter ywcJ
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base A (116/122);  total (118/123)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 243 total aligned reads displayed.

TTTGTAATCCATCTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAACTGTTTTTTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCA  >  CP006881/3722875‑3723167
                                                                                                                                                   |                                                                                                                                                   
  tGTAATCCATCTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGaa                                                                                                                                                 >  2:4715137/1‑150 (MQ=255)
     aaTCCATCTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATAc                                                                                                                                              <  2:3915505/150‑1 (MQ=255)
     aaTCCATCTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATAc                                                                                                                                              <  2:3976240/150‑1 (MQ=255)
       tCCATCTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAAATTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATGCAGATTCAGGATACGc                                                                                                                                            >  2:158290/1‑150 (MQ=255)
         cATCTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCtt                                                                                                                                          <  2:4579322/150‑1 (MQ=255)
          aTCTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCttt                                                                                                                                         >  2:2313131/1‑150 (MQ=255)
           tCTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtc                                                                                                                                        <  1:66481/150‑1 (MQ=255)
           tCTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtc                                                                                                                                        <  1:3578412/150‑1 (MQ=255)
             tGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcat                                                                                                                                      <  2:1229175/150‑1 (MQ=255)
             tGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcat                                                                                                                                      <  1:3721404/150‑1 (MQ=255)
              gTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcatc                                                                                                                                     >  2:527440/1‑150 (MQ=255)
               tttCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGTCACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcatca                                                                                                                                    >  1:3235975/1‑150 (MQ=255)
               tttCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCATATTCAGATTAGGAATAAGCTTtcatca                                                                                                                                    >  2:1428860/1‑150 (MQ=255)
                 tctcCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATa                                                                                                                                  >  2:1866241/1‑150 (MQ=255)
                  ctcCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAGTACGCTTTCATCATaa                                                                                                                                 >  1:3484829/1‑150 (MQ=255)
                  ctcCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATaa                                                                                                                                 >  2:2884377/1‑150 (MQ=255)
                      cccTTTTATTTACACAAAAAAGACCTAAAATTCGCCCACGAATAAAGGACACAGCGATCCTTTTTCATTTGCGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATCCGCTTTCATCATAAAtca                                                                                                                             <  1:1898937/150‑3 (MQ=255)
                         ttttATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGa                                                                                                                          >  1:331628/1‑150 (MQ=255)
                           ttatttaAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATa                                                                                                                        <  2:846314/150‑1 (MQ=255)
                            tatttaAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAg                                                                                                                       >  1:1827839/1‑150 (MQ=255)
                             atttaAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGc                                                                                                                      <  2:3046743/150‑1 (MQ=255)
                              tttaAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCg                                                                                                                     >  2:4026368/1‑150 (MQ=255)
                              tttaAACAAAAAAGACCTAAAATTCACCAATGAATAAAGCACACAGGGATCCTTTTTCATTTTCGCAAATTTGAGAACTTGCTTTCTTTACCAGTCACAATCCCACTTATTCAGCTTAATGAAACGCTTTCATCAAAAAACATCATAGcc                                                                                                                     >  1:2133203/1‑149 (MQ=255)
                               ttaAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACCCAGCGATCCTTTTTCATTTACGCAATTTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTAATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGt                                                                                                                    <  1:4399736/150‑1 (MQ=255)
                               ttaAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGt                                                                                                                    >  1:1691681/1‑150 (MQ=255)
                               ttaAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGt                                                                                                                    >  2:4636457/1‑150 (MQ=255)
                                taATCAAATAAGACCTAAAATTGGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTCCGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGtt                                                                                                                   <  1:4558752/150‑1 (MQ=255)
                                      aaaaaGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGCCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTc                                                                                                             <  1:3843833/150‑1 (MQ=255)
                                         aaGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAc                                                                                                          <  2:429642/150‑1 (MQ=255)
                                          aGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACt                                                                                                         >  2:4042366/1‑150 (MQ=255)
                                           gACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACta                                                                                                        >  2:350876/1‑149 (MQ=255)
                                            aCCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACtat                                                                                                       >  2:1383657/1‑148 (MQ=255)
                                               tAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAtttt                                                                                                  <  2:4369318/150‑1 (MQ=255)
                                               tAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAtttt                                                                                                  <  1:2675211/150‑1 (MQ=255)
                                                aaaaTTCGCCAACGAATAAAGGACACAGCGATCCTTTCTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAttttt                                                                                                 <  1:1778062/150‑1 (MQ=255)
                                                 aaaTTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAtttttt                                                                                                <  1:936038/150‑1 (MQ=255)
                                                  aaTTCGCCAACGAATAAAGGTCACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGAATAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAttttctt                                                                                               >  1:4507813/1‑147 (MQ=255)
                                                  aaTTCGCCAACGAATAAAGGACACAGCGGTCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAttttttt                                                                                               >  2:1546816/1‑149 (MQ=255)
                                                  aaTTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAttttttt                                                                                               <  2:2051834/150‑2 (MQ=255)
                                                   aTTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAttttttta                                                                                              <  2:312667/150‑3 (MQ=255)
                                                   aTTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAttttttta                                                                                              >  1:312667/1‑148 (MQ=255)
                                                    ttCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAtttttttag                                                                                             >  1:2611518/1‑147 (MQ=255)
                                                     tCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAtttttttagt                                                                                            >  1:2917955/1‑146 (MQ=255)
                                                      cGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAtttttttagtt                                                                                           <  2:2174078/150‑6 (MQ=255)
                                                        ccAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTaa                                                                                          >  2:3685308/1‑150 (MQ=255)
                                                          aaCGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAAt                                                                                        <  2:1690366/150‑1 (MQ=255)
                                                          aaCGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAACCCCGCTTATCCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAAt                                                                                        <  1:4186858/150‑1 (MQ=255)
                                                            cGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAg                                                                                      >  1:2585425/1‑150 (MQ=255)
                                                             gAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGt                                                                                     >  2:878298/1‑150 (MQ=255)
                                                              aaTAAAGGTCACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGtt                                                                                    <  1:3658473/150‑1 (MQ=255)
                                                              aaTAAAGGACACAGCGATCCTTTCTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGtt                                                                                    <  1:2826341/150‑1 (MQ=255)
                                                                 aaaGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGa                                                                                 >  1:1018435/1‑150 (MQ=255)
                                                                 aaaGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGa                                                                                 >  1:2275955/1‑150 (MQ=255)
                                                                         caGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAAcat                                                                         <  1:1457393/150‑3 (MQ=255)
                                                                         caGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAAcat                                                                         >  2:1939870/1‑148 (MQ=255)
                                                                           gCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATCCGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAAcatgt                                                                       <  1:1519830/150‑5 (MQ=255)
                                                                           gCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAAcatgt                                                                       <  1:4715145/150‑5 (MQ=255)
                                                                           gCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAAcatgt                                                                       <  1:1218663/150‑5 (MQ=255)
                                                                            cGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGGTATAAcatgta                                                                      >  1:1128551/1‑145 (MQ=255)
                                                                            cGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAAcatgta                                                                      >  2:1767817/1‑145 (MQ=255)
                                                                              aTCCCTTTCCCTTTACGCAAATTTTGGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGa                                                                    <  1:3659920/150‑1 (MQ=255)
                                                                                     ttCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAAt                                                             <  2:931445/150‑1 (MQ=255)
                                                                                         tttAGGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCGCAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGt                                                         <  2:1213902/150‑1 (MQ=255)
                                                                                         tttACGCAAATCTTAGGTCTTGCCTGCTTTACCAGGCACAATCCCGCTTATTCAGATTAAGAATCCGCTTTCATCATGAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGt                                                         <  1:4410682/150‑1 (MQ=255)
                                                                                          ttACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTa                                                        <  1:4060099/150‑1 (MQ=255)
                                                                                           tACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaa                                                       <  1:4168152/150‑1 (MQ=255)
                                                                                           tACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaa                                                       <  2:1059006/150‑1 (MQ=255)
                                                                                            aCGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCGCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaa                                                      >  1:2074958/1‑150 (MQ=255)
                                                                                            aCGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATAAAGAATACGCTTCCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaa                                                      <  2:3027728/150‑1 (MQ=255)
                                                                                             cGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaaa                                                     >  2:1836244/1‑150 (MQ=255)
                                                                                               cAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaaaat                                                   >  2:4212804/1‑149 (MQ=255)
                                                                                               cAAACTTTAGGTCTTGCCTGCTTTACCAGCCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaaaat                                                   <  2:3744746/150‑2 (MQ=255)
                                                                                                  aTTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                                >  1:3565047/1‑149 (MQ=255)
                                                                                                      tAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtgt                                            >  2:29685/1‑150 (MQ=255)
                                                                                                       atgTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtgtg                                           >  2:1133084/3‑150 (MQ=255)
                                                                                                          tCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaa                                        <  2:716183/150‑1 (MQ=255)
                                                                                                           cTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaat                                       <  1:3915513/150‑2 (MQ=255)
                                                                                                             tGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATAc                                     <  2:1308538/150‑1 (MQ=255)
                                                                                                             tGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTCCATCCTAGATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATAc                                     <  2:3889580/150‑1 (MQ=255)
                                                                                                              gCCTGCTTTCCCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACt                                    <  2:1664603/150‑1 (MQ=255)
                                                                                                                 tGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                 >  1:2293857/1‑150 (MQ=255)
                                                                                                                 tGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGAGAAATACTTca                                 >  2:3302071/1‑150 (MQ=255)
                                                                                                                     ttACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATGGTGAAATACTTCACAat                             >  1:708325/1‑150 (MQ=255)
                                                                                                                       aCCAGTCACTATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAACTAATTGTGAAATACTTCACAatat                           >  1:411495/1‑150 (MQ=255)
                                                                                                                        ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                          <  2:4404630/150‑1 (MQ=255)
                                                                                                                        ccAGTCACAATCCCGCTTATCCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                          <  2:3412223/150‑1 (MQ=255)
                                                                                                                         cAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCg                         >  2:918669/1‑150 (MQ=255)
                                                                                                                          aGTCACAATCCCGCTTATTCAGATCAAGAATACGCTTTCATCATAAATCATGATAGCCTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAACATCGt                        >  1:973969/1‑150 (MQ=255)
                                                                                                                             cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCt                     >  1:3776724/1‑150 (MQ=255)
                                                                                                                              acaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCta                    <  1:4019605/150‑1 (MQ=255)
                                                                                                                                 aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATAc                 <  2:1911265/150‑1 (MQ=255)
                                                                                                                                 aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATAc                 >  2:3594332/1‑150 (MQ=255)
                                                                                                                                 aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATAc                 <  2:3235975/150‑1 (MQ=255)
                                                                                                                                  tCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACt                <  2:2543177/150‑1 (MQ=255)
                                                                                                                                  tCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACt                <  1:3867694/150‑1 (MQ=255)
                                                                                                                                     cGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATg             >  1:3612270/1‑150 (MQ=255)
                                                                                                                                       cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTCTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCt           <  2:3102875/150‑1 (MQ=255)
                                                                                                                                             cAGATTGAGAATACCCTCCCATCATAGATCATGATAGCGTTTCCGTCAACTATTTTTTTAGTTAAATAGTGTGATATCACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCCTGCTATACTATGCTCAATCa     <  2:2133203/150‑1 (MQ=255)
                                                                                                                                               gATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAtg   >  1:1105666/1‑149 (MQ=255)
                                                                                                                                                aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAtga  >  2:2282790/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TTTGTAATCCATCTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAACTGTTTTTTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCA  >  CP006881/3722875‑3723167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: