| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 3,723,095 | T→A | intergenic (‑209/‑92) | U712_19190 ← / → U712_19195 | PTS system sucrose‑specific EIIBC component/putative transporter ywcJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,723,095 | 0 | T | A | 99.5% | 723.5 / NA | 207 | intergenic (‑209/‑92) | U712_19190/U712_19195 | PTS system sucrose‑specific EIIBC component/putative transporter ywcJ |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base A (104/102); total (104/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 207 total aligned reads displayed.
GATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAACT‑G‑TTT‑T‑TTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTGAACAGTACGCTTTGAACAAACTA > CP006881/3722952‑3723237 | aTCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCCTTACCAGTCACAATCCCGCTTATTCAGAGTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGa < 1:3659918/150‑1 (MQ=255) cTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACT‑A‑TTT‑TCTTAGTTAAACAGTTTGATATAACATGTAGACaa > 1:3780508/1‑150 (MQ=255) tttttCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAAAACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACaaa > 2:1580802/1‑150 (MQ=255) tCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAAtt < 2:807090/150‑1 (MQ=255) cATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTc > 1:2867178/1‑150 (MQ=255) tACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaa > 1:3569936/1‑150 (MQ=255) aCGCAACTTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaa < 1:3997859/150‑1 (MQ=255) aCGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCGCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaa > 1:2074958/1‑150 (MQ=255) aCGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaa > 2:3033213/1‑150 (MQ=255) cGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaaa < 2:1203649/150‑1 (MQ=255) cGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaaa > 2:1836244/1‑150 (MQ=255) gCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaaaa > 1:2637848/1‑150 (MQ=255) cAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaaaat > 2:4212804/1‑149 (MQ=255) aTTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa > 2:1215024/1‑149 (MQ=255) tttAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTCCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAaattaatt < 1:1258087/150‑1 (MQ=255) ttAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAAAAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtg > 2:39181/1‑150 (MQ=255) tAGGTCTTGCCTGCTCTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtgt < 2:1947911/150‑1 (MQ=255) atgTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtgtg > 2:1133084/3‑150 (MQ=255) ggTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATCAATTGTGa > 2:1351571/1‑150 (MQ=255) cTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaat < 1:3915513/150‑2 (MQ=255) cTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaat > 1:2119312/1‑149 (MQ=255) tGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATAc < 2:1308538/150‑1 (MQ=255) gCCTGCTTTCCCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACt < 2:1664603/150‑1 (MQ=255) cTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATCGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTc < 1:1939870/150‑1 (MQ=255) tGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca > 1:2293857/1‑150 (MQ=255) gCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcac < 2:3744653/150‑1 (MQ=255) ttACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAat > 1:3509902/1‑150 (MQ=255) tACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata > 2:4686766/1‑150 (MQ=255) ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc < 2:4404630/150‑1 (MQ=255) ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc < 2:4299799/150‑1 (MQ=255) ccAGTCACAATCCCGCTTATCCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc < 2:3412223/150‑1 (MQ=255) cAGTCACAATCCCGCTTATTCAGAGTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTCCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCg < 2:2979081/150‑1 (MQ=255) aGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGt < 1:870605/150‑1 (MQ=255) aGTCACAATCCCGCTTATTCAGATCAAGAATACGCTTTCATCATAAATCATGATAGCCTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAACATCGt > 1:973969/1‑150 (MQ=255) gTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg < 1:4158815/150‑1 (MQ=255) tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGc > 1:4053126/1‑150 (MQ=255) cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCt > 1:4393986/1‑150 (MQ=255) aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATAc < 2:3235975/150‑1 (MQ=255) cGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATg > 1:3612270/1‑150 (MQ=255) cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACT‑A‑TTTCT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCt < 2:3102875/150‑1 (MQ=255) ttATTCAGATTAAGAATACGCTTTCATCATAAAGCATGACAGGGCTTCCGTCAACTAT‑TTT‑T‑TTAGATAAATAGGTTGATATAACATGTAGTCAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTc < 2:1876169/150‑1 (MQ=255) aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCaa > 1:3265658/1‑150 (MQ=255) cAGATTGAGAATACCCTCCCATCATAGATCATGATAGCGTTTCCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTGTGATATCACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCCTGCTATACTATGCTCAATCa < 2:2133203/150‑1 (MQ=255) aGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt > 1:4420547/1‑150 (MQ=255) gATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAtg > 1:1105666/1‑149 (MQ=255) aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAtga < 2:1897107/150‑3 (MQ=255) aaTACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATgaaagaaa > 2:3994012/1‑150 (MQ=255) aTACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaagaaag > 2:1035598/1‑150 (MQ=255) tACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGc < 1:3033213/150‑1 (MQ=255) gaCGCTTTCATCATAACTCATGATAGCGTTTTCGACAACTAT‑TTT‑T‑TTAGTTAAGTAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCCCAACCATGAAAGAAAGc < 2:11575/149‑1 (MQ=255) gCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAgg < 1:4212804/150‑1 (MQ=255) gCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAgg > 2:4549071/1‑150 (MQ=255) gCTTTCATCATAAACCTTGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAgg < 2:3304206/150‑1 (MQ=255) catAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACa < 1:2787190/150‑1 (MQ=255) atAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACaa > 2:3577819/1‑150 (MQ=255) atAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACaa > 1:645603/1‑150 (MQ=255) tAAATCATGATATCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATTTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCACAATCATGAAAGAAAGCAGGAAAAGACAAt < 1:3498688/150‑1 (MQ=255) tAAATCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAAt > 2:3801334/1‑150 (MQ=255) aaaTCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATg < 1:1767817/150‑1 (MQ=255) aaaTCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATg < 1:289156/150‑1 (MQ=255) aaTCATGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCGATCATGAAAGAAAGCAGGAAAAGACAATgg < 2:4337288/150‑1 (MQ=255) tcaTGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGaa < 1:1133084/148‑1 (MQ=255) tGATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACt > 1:2399731/1‑150 (MQ=255) gATAGCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTc < 2:2275955/150‑1 (MQ=255) aTAGCGTTCCCGTCAACTAT‑TTT‑T‑TTAGTAAAATAGTTTGATATATCTTGTAGACAGACATTCGTAAAAAGTCATTGTGAAATACTTCACAATAGCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCa < 1:1428860/150‑1 (MQ=255) gCGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGc > 1:4504653/1‑150 (MQ=255) cGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCa < 2:4507812/150‑1 (MQ=255) cGTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCa > 2:3319151/1‑150 (MQ=255) gTTTTCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCAt < 2:205700/150‑1 (MQ=255) ttttCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACATAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCAtt < 2:927980/150‑1 (MQ=255) ttttCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCGATCATGAAAGAAAGGAGGAAAAGACAATGGAAACTCAAGCAtt > 1:4583434/1‑150 (MQ=255) ttCGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCAttac > 2:375716/1‑148 (MQ=255) cGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACaa < 1:3385650/150‑1 (MQ=255) cGTCAACTAT‑TTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAAAGGAAACTCAAGCATTACaa > 1:2565544/1‑150 (MQ=255) gTCAACT‑ATTTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACaaa > 2:2021533/1‑150 (MQ=255) gTCAACT‑ATTTT‑T‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACaaa > 2:4378480/1‑150 (MQ=255) actatttt‑t‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGt > 1:2022190/6‑150 (MQ=255) ctatttt‑t‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt < 2:1677318/146‑1 (MQ=255) tatttt‑t‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTCTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGATAAGACAATGGAAACTCAAGCATTACAAAAGGTTg < 1:4084155/147‑1 (MQ=255) atttt‑t‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTAAACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGa > 2:1511363/3‑150 (MQ=255) tt‑t‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACa < 2:2888101/150‑1 (MQ=255) tt‑t‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACa > 2:2162419/1‑150 (MQ=255) tAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTat < 2:3669730/150‑2 (MQ=255) tAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTat < 1:3666719/150‑2 (MQ=255) ttAAATAGGTTGATATAACATGTAGACAGAAAGTCGTAACAATTAATTGTGAAATCCTTCACAATATCGTGCTATACTATGCACAACCATGAAAGAGAGCAGGAAAAGGCAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGcg < 2:2421984/150‑2 (MQ=255) tAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCtt > 2:2616247/1‑150 (MQ=255) tAAATAGTTTGATATAACATGAAGACAAAAATTCGTAATAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCACTACAAAAGTGTGAACAGTAAGCtt > 2:3119367/1‑150 (MQ=255) aaTAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTg > 1:159260/1‑150 (MQ=255) aaTAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAATATGCTTTg < 2:2585425/150‑1 (MQ=255) aTAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGa > 1:4035291/1‑150 (MQ=255) tAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaa < 2:4104140/150‑1 (MQ=255) tAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaa < 2:4182828/150‑1 (MQ=255) tAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaa > 1:3791811/1‑150 (MQ=255) gTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGATGAACAGGATGCTTTggaaa > 1:3706298/1‑146 (MQ=255) tttGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGATAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAaaaa < 2:3507151/150‑1 (MQ=255) tttGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAaaaa < 1:1866241/150‑1 (MQ=255) tttGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGGATGCTTTGAaaaa > 1:744750/1‑150 (MQ=255) tGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAAc < 1:1472469/150‑1 (MQ=255) gATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAAca > 2:2546402/1‑149 (MQ=255) atatAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAAcaa > 2:1008748/1‑148 (MQ=255) | GATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAACT‑G‑TTT‑T‑TTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTGAACAGTACGCTTTGAACAAACTA > CP006881/3722952‑3723237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |