| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | pSIJ663_pHT315_araE_xy | 3,843 | Δ5 bp | intergenic (+128/‑24) | eryR → / → ampR | –/– |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | pSIJ663_pHT315_araE_xy | = 3842 | 28 (0.000) | 5066 (0.890) | 180/250 | 0.9 | 99.5% | intergenic (+127/‑29) | eryR/ampR | –/– |
| ? | pSIJ663_pHT315_araE_xy | 3848 = | 26 (0.000) | intergenic (+133/‑23) | eryR/ampR | –/– | |||||
Only 100 of 5086 total aligned reads displayed.
GGGAGGAAATAATTCTATGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > pSIJ663_pHT315_araE_xy/3704‑3842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGG > pSIJ663_pHT315_araE_xy/3848‑3985 AATAATTCTATGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGATATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACA < 3:440506/139‑1 tcAGTAGCTTTTTTAAATTTTGAAAGTTACACGTTAATAAAGGCATTGTAGATAAATTATAAGATATACTACTGTCAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 6:43776/137‑1 TGAGTCTCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 8:417261/139‑1 TGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 5:119171/139‑1 TGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 1:249479/139‑1 TGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGGCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 7:223810/139‑1 AGTCGCTTTTTTAATTTTGTAAAGTTACACGTTACTAAAGGGAATGTATATAAATTTTTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGA < 3:5268/138‑1 AGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAA < 3:410724/139‑1 TTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTAT < 5:39726/138‑1 TTTTAAATTTGGAAAGTTAAACGTTACTAAAGGGAATGGATATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTAT < 1:283467/137‑1 tAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGATAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTA < 6:245669/137‑1 AAATTTGGAAAGTTACACGTTACTAAAGGGAATGGATATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTA < 5:342520/138‑1 AATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACATCTTCCAAGAAGATAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATT < 7:418988/139‑1 GGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAAATTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACA > 6:103643/1‑139 ccacagACTAAAGGGACTGGACAAAAATTATTAGATATCCTCCTGACAGCTTCCCCGAAGCTAACGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGT < 4:285709/133‑1 CACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGT < 8:232933/139‑1 ACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCT > 7:360207/1‑139 CTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCT > 3:110748/1‑138 CTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCT > 5:181384/1‑138 CTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACA > 7:19340/1‑93 GGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC > 8:44967/1‑139 GGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGAACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC > 4:82431/1‑139 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCCAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTT > 3:241787/1‑139 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTT > 2:387570/1‑139 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTT > 3:331723/1‑139 AATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGA > 1:126135/1‑105 TGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCACCATTTCCGTGTCGCCCTTATTCCCTTTT > 4:239457/1‑139 TGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTT > 3:372787/1‑139 TGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTAGTCAACATTTCCGTGTCGCCCTTAGTCCCTTTT > 8:348641/1‑139 GATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGC < 6:276790/139‑1 ATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGTAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG > 7:326280/1‑139 ATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG < 8:71768/139‑1 ATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG > 1:213230/1‑139 TAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG > 6:370307/1‑87 AATTATTAGATATACTACTGACAGCTTCAAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCACTTTTTTGCGGCA > 5:279865/1‑139 TTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATT < 5:251996/139‑1 ATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTATTTGCGGCATTTT > 6:406589/1‑139 TTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCGCTGTTTCACTTTTTTGCGGCTTTTTG > 5:150651/1‑139 AGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTAT < 1:33241/86‑1 ATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCGTATTCCCTTTTTTGCGGCATTTTGCCTTCC > 8:269645/1‑139 TACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCC < 7:159312/138‑1 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTG > 4:43208/1‑139 ACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG > 4:354159/1‑72 GACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTG > 7:293029/1‑139 GACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTA < 4:151052/79‑1 ACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGC > 4:51475/1‑139 ACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGC > 1:148384/1‑139 ACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTG < 6:51894/138‑1 ACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCATTTTTTGCGGCATTTTGCCTTCCTGTTTTTGC > 6:136646/1‑139 ACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCC > 3:82980/1‑106 ACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 1:49681/65‑1 ACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAAGTTGGGGTACATTGAAAAAGGAAGAGAATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCGTTCATGTTTTTGC > 5:428426/1‑139 CAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT < 7:255789/139‑1 CAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTC < 2:179724/128‑1 AGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTC > 6:169435/1‑139 AGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTACGTGTCGCCCTTATTCCCTTTTTTGCTGCATTTTGCAGTCCTGTTGTTGCT > 5:692/1‑138 AGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGG < 3:140423/63‑1 AGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAA < 2:324958/60‑1 CTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTA > 3:166307/1‑49 TTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACC > 6:91087/1‑139 TTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACC > 7:388299/1‑139 TTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCATTCCTGGATTTGCTCACC > 4:190212/1‑139 TTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATT < 1:356828/75‑1 TTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAA > 7:121188/1‑56 CCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACC > 5:370660/1‑137 CCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACC > 3:271409/1‑137 CCAAGAAGCTAAAGAGGTCCCTAGCGACTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTAT < 3:299284/66‑1 AGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGA > 8:383893/1‑138 GCTAATGAGGTCCGTAGCGCCTTCGGGGAATTTGGGGTAGATTGAAAATGGAAGAGTATGAGTATTCAACTTTTGCGTGTCGCCCTTATTCCCTTTTTTGCGGCTTTTTGCCTTCCTGTTTTTGCTCACCCAGAAACG < 1:17748/138‑1 GCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGC > 8:157284/1‑139 GCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGC > 7:68654/1‑139 CTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCT > 5:216481/1‑139 CTAAAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGT < 2:424121/79‑1 AAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGT < 6:337760/139‑1 AAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGT < 1:100051/139‑1 AAGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGT < 2:354993/139‑1 AGAGGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG < 5:458287/139‑1 GGTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGA > 2:255490/1‑137 GTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAG > 1:311775/1‑139 GTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAG > 4:320748/1‑139 GTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT > 8:195363/1‑117 GTCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTT > 8:308154/1‑65 TCCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTT > 5:305300/1‑110 CCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGT > 6:302430/1‑138 CCCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCGTTTTCCCGTTTTTGCGGCATTTTGCCTTGCGGTTTTTGGAACCCCAGCACCGCGGGTGAAAtt > 2:215624/1‑136 CCCTAGCGCCTACGGGGAATTAGGGGTAAATTGAAAAAGGAAGACTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTATTTGATCAACCAGAAACCCTCTTGAAAGT > 2:74954/1‑138 CCTAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA > 2:111772/1‑138 TAGCGCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTAT > 2:134606/1‑45 GCCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATG < 7:447988/139‑1 CCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCGTGTTTTTGCTCACCCAGATACGCTGGTGAAAGTAAAAGATGC > 2:293086/1‑139 CCTACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGC > 1:421567/1‑139 taaGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG < 4:394486/120‑1 ACGGGGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTG > 8:123748/1‑138 GGAATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTG > 3:197137/1‑134 AATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGAT > 2:46380/1‑137 AATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTG < 6:209731/132‑1 ATTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG > 1:75745/1‑139 TTTGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTAATCCC‑TTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCATAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTT < 7:90891/139‑1 TGGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTT < 4:118360/138‑1 GGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGG > 1:39127/1‑139 GGGAGGAAATAATTCTATGAGTCGCTTTTTTAAATTTGGAAAGTTACACGTTACTAAAGGGAATGGAGATAAATTATTAGATATACTACTGACAGCTTCCAAGAAGCTAAAGAGGTCCCTAGCGCCTACGGGGAATTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > pSIJ663_pHT315_araE_xy/3704‑3842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGGTACATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGG > pSIJ663_pHT315_araE_xy/3848‑3985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |