Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 3,723,022 G→A intergenic (‑136/‑165) U712_19190 ← / → U712_19195 PTS system sucrose‑specific EIIBC component/putative transporter ywcJ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068813,723,0220GA100.0% 404.4 / NA 117intergenic (‑136/‑165)U712_19190/U712_19195PTS system sucrose‑specific EIIBC component/putative transporter ywcJ
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (48/69);  total (48/69)

Only 100 of 121 total aligned reads displayed.

CTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAACT‑GTT‑TTTTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATG  >  CP006881/3722887‑3723156
                                                                                                                                       |                                                                                                                                        
cTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTaag                                                                                                                                        >  8:184119/1‑138 (MQ=255)
cTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTaag                                                                                                                                        >  7:337592/1‑138 (MQ=255)
cTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTaag                                                                                                                                        >  7:301596/1‑138 (MQ=255)
cTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAAATAGCCAACGAATAAAGGACACAGCGATCATTTTTAATTAACGCAAATATTAGTTCTTTCCTGATTTACCAGTCACAATCCACCTTATTCATATTaag                                                                                                                                        >  4:148639/1‑138 (MQ=255)
  gTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGaa                                                                                                                                      >  1:228189/1‑138 (MQ=255)
     tctcCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACg                                                                                                                                  >  6:423411/1‑139 (MQ=255)
           ccTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtca                                                                                                                            >  6:252889/1‑139 (MQ=255)
             ttttATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTCCCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcat                                                                                                                           >  7:430461/1‑138 (MQ=255)
             ttttATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcat                                                                                                                           >  7:393399/1‑138 (MQ=255)
             ttttATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcat                                                                                                                           >  7:29806/1‑138 (MQ=255)
             ttttATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcat                                                                                                                           >  2:118584/1‑138 (MQ=255)
             ttttATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcat                                                                                                                           >  4:347793/1‑138 (MQ=255)
               ttatttaAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcatca                                                                                                                         <  7:152595/138‑1 (MQ=255)
                 atttaAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATa                                                                                                                       <  8:393399/138‑1 (MQ=255)
                 atttaAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATa                                                                                                                       <  8:337592/138‑1 (MQ=255)
                    taAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAAt                                                                                                                    <  1:118584/138‑1 (MQ=255)
                      aaCAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCAt                                                                                                                 >  4:217091/1‑139 (MQ=255)
                       aCAAAAAAGACCTAAATTTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTCCGCTAATTTTTGGTCTTGCCTGCTTTACCAGTCACAATCGCGCTTATTCAGATAAAGAATAAGCTTTCGGCATAGAtcag                                                                                                                 >  1:377566/1‑135 (MQ=255)
                                aCCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGttt                                                                                                       >  1:279471/1‑139 (MQ=255)
                                aCCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGttt                                                                                                       >  1:39457/1‑139 (MQ=255)
                                   tAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCg                                                                                                    >  6:368049/1‑139 (MQ=255)
                                   tAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCg                                                                                                    >  6:374105/1‑139 (MQ=255)
                                   tAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCg                                                                                                    >  4:191937/1‑139 (MQ=255)
                                     aaaTTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCg                                                                                                    <  7:217513/137‑1 (MQ=255)
                                        ttCCCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAc                                                                                               <  6:125830/139‑1 (MQ=255)
                                             cAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCa                                                                                                 <  4:413906/132‑1 (MQ=255)
                                             cAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCa                                                                                                 >  3:413906/1‑132 (MQ=255)
                                                cGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACT‑Att‑tttt                                                                                     >  3:56953/1‑139 (MQ=255)
                                                        ggACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTaaa                                                                              <  1:272774/139‑1 (MQ=255)
                                                        ggACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTaaa                                                                              <  3:216446/139‑1 (MQ=255)
                                                           cacaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAg                                                                           >  2:333121/1‑139 (MQ=255)
                                                           cacaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAg                                                                           >  5:335179/1‑139 (MQ=255)
                                                           cacaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATCATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAg                                                                           >  6:7275/1‑139 (MQ=255)
                                                           cacaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGATTTCTTCTTAAATCATGATAGCGTTTTCGTAAACTATTT‑TTTTATTTAAATAg                                                                           >  8:320698/1‑139 (MQ=255)
                                                            acaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGt                                                                          >  7:185643/1‑139 (MQ=255)
                                                            acaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGt                                                                          >  5:26115/1‑139 (MQ=255)
                                                            acaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGt                                                                          <  7:87968/139‑1 (MQ=255)
                                                            acaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGt                                                                          <  1:226258/139‑1 (MQ=255)
                                                             caGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGtt                                                                         <  2:39457/139‑1 (MQ=255)
                                                             caGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGtt                                                                         <  3:191937/139‑1 (MQ=255)
                                                              aGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcatca                                                                                                                         >  4:375633/1‑91 (MQ=255)
                                                              aGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTtcatca                                                                                                                         <  3:375633/91‑1 (MQ=255)
                                                              aGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTa                                                                                >  4:31213/1‑131 (MQ=255)
                                                              aGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTa                                                                                <  3:31213/131‑1 (MQ=255)
                                                              aGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGttt                                                                        >  8:262309/1‑139 (MQ=255)
                                                              aGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTAGCATGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGttt                                                                        >  8:254983/1‑139 (MQ=255)
                                                                   tCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGaa                                                                                                                                      <  6:285142/73‑1 (MQ=255)
                                                                   tCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATat                                                                   <  2:279471/139‑2 (MQ=255)
                                                                   tCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATat                                                                   <  3:217091/139‑2 (MQ=255)
                                                                   tCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATa                                                                    >  7:238406/1‑138 (MQ=255)
                                                                   tCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATa                                                                    >  5:151080/1‑138 (MQ=255)
                                                                   accTTTTACATTTACGCAAATTTTAGGTCTTGCATGCTTTACCAGTCACAATCCCGCATATTCAGATTAAGAATACGCTAACATAATAAATAATTATAGCGTATTCGTCAACT‑ATTAATTTAGATAAATATATTGATa                                                                    >  4:254077/2‑138 (MQ=255)
                                                                        tttCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAAcat                                                              >  3:114113/1‑137 (MQ=255)
                                                                         ttCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAAcat                                                              <  4:450647/138‑3 (MQ=255)
                                                                                          tAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTa                                             <  1:94151/138‑1 (MQ=255)
                                                                                                  gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaatattaa                                     <  4:56953/138‑7 (MQ=255)
                                                                                                    cTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtg                                  <  1:214423/139‑1 (MQ=255)
                                                                                                            ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                           <  8:238406/138‑3 (MQ=255)
                                                                                                            ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                           <  6:432582/138‑3 (MQ=255)
                                                                                                               gTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACtt                        >  6:128863/1‑138 (MQ=255)
                                                                                                                tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                      <  4:114113/139‑1 (MQ=255)
                                                                                                                 cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                           >  2:116741/1‑131 (MQ=255)
                                                                                                                 cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                           <  1:116741/133‑3 (MQ=255)
                                                                                                                 cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                      >  6:198536/1‑138 (MQ=255)
                                                                                                                  acaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcaca                    <  6:26115/139‑1 (MQ=255)
                                                                                                                     ataccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAAAAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  8:301596/136‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  5:137632/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  2:239838/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  4:159238/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  4:347627/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  2:228189/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  7:262309/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  5:198536/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  7:184119/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  7:14325/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  5:297080/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  3:299924/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACT‑ATTATTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  5:423411/139‑1 (MQ=255)
                                                                                                                     aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGATTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  5:389963/139‑1 (MQ=255)
                                                                                                                      tCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAatat                <  8:29806/139‑1 (MQ=255)
                                                                                                                        ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc               <  7:254983/138‑1 (MQ=255)
                                                                                                                        ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc               <  4:389541/138‑1 (MQ=255)
                                                                                                                         cGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  3:228698/135‑1 (MQ=255)
                                                                                                                         cGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 >  4:228698/1‑135 (MQ=255)
                                                                                                                         cGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 <  8:110714/135‑1 (MQ=255)
                                                                                                                         cGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 >  7:110714/1‑135 (MQ=255)
                                                                                                                          gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg            <  1:333121/139‑1 (MQ=255)
                                                                                                                          gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg            <  4:324505/139‑1 (MQ=255)
                                                                                                                          gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg            <  8:278891/139‑1 (MQ=255)
                                                                                                                          gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTAAACTATTT‑TTTTAGTTAAATAGTTTGATATAACTTGTAGTCAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCTTg            <  3:389183/139‑1 (MQ=255)
                                                                                                                          gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATCATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg            <  5:7275/139‑1 (MQ=255)
                                                                                                                          gCTTATTAAGATAAAGAATACGCTTACATCATAAATCATGATAGCGTTTTCGTCAAATATTT‑TTTTAGTTAAAAAGTTTGAAATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg            <  7:320698/139‑1 (MQ=255)
                                                                                                                           cgtATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTTGTTAAATAGTTTGATATACCATGTAGCCAAAAATTCGTAAAAATTAATTGTGAAAGACTTCACATTATCGTGc           >  2:183430/3‑139 (MQ=255)
                                                                                                                              aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                     >  5:242644/1‑109 (MQ=255)
                                                                                                                              aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                     <  6:242644/110‑2 (MQ=255)
                                                                                                                              aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCta         <  3:347793/138‑1 (MQ=255)
                                                                                                                               ttCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata       <  5:368049/139‑1 (MQ=255)
                                                                                                                               ttCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata       <  5:374105/139‑1 (MQ=255)
                                                                                                                                    aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                 >  7:52470/1‑124 (MQ=255)
                                                                                                                                    aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTATTT‑TTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATg  >  4:435669/1‑139 (MQ=255)
                                                                                                                                       |                                                                                                                                        
CTGTTTCTCCCCCTTTTATTTAAACAAAAAAGACCTAAAATTCGCCAACGAATAAAGGACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAACT‑GTT‑TTTTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATG  >  CP006881/3722887‑3723156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑