| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 3,935,823 | Δ1 bp | 100% | intergenic (+35/+1) | ywbE → / ← rlmI | conserved protein of unknown function/large subunit ribosomal RNA m5C1962 methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,935,823 | 0 | T | . | 100.0% | 1639.6 / NA | 366 | intergenic (+35/+1) | ywbE/rlmI | conserved protein of unknown function/large subunit ribosomal RNA m5C1962 methyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (162/204); total (162/204) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 389 total aligned reads displayed.
GACGAGAGGGACAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCATTTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCAATAAAGCCTTTG > BS168_reference_genome/3935674‑3935968 | gagaGGGACAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCattat < 1:5745312/150‑3 (MQ=255) gagaGGGACAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCattat > 1:729277/1‑148 (MQ=255) agGGACAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGTCGCATCGGCCGCGTCCAGCAGATCGTTTCTACATAAAAAAAAACTGCCCCTGAACAGGGCAGCATTTTCA‑TTAtttt > 2:1212268/1‑150 (MQ=255) gggACAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCGGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAACAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTAttttt < 1:610095/150‑1 (MQ=255) ggACAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTAtttttt > 2:1676598/1‑150 (MQ=255) ggACAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTAtttttt < 2:4512774/150‑1 (MQ=255) gTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCa < 1:4382538/150‑1 (MQ=255) gTGAAGGATATTTTGACGAAATCAAACATTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGCCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCa < 2:1455487/150‑1 (MQ=255) gATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGa > 1:1945206/1‑150 (MQ=255) atatTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 1:644234/150‑1 (MQ=255) atatTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGATGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTTCTGAAAGAc > 1:4988076/1‑150 (MQ=255) tatTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAcc < 2:1365131/150‑1 (MQ=255) atTTTGACGAAATCAAACTTTGATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCACCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCa < 2:3620806/150‑1 (MQ=255) atTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCa < 2:44924/150‑1 (MQ=255) ttttGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCAc > 1:4701460/1‑150 (MQ=255) ttGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGGTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACtt > 1:2927886/1‑150 (MQ=255) tGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCAGCCCCTGAACAGGCCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACttt > 1:2440602/1‑150 (MQ=255) acaaaaTTAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAACTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCa < 1:1735089/147‑1 (MQ=255) aCGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCa > 2:2512177/1‑150 (MQ=255) cGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGATGCCCCTTAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAGCACTTTCAg > 1:4954403/1‑150 (MQ=255) gAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAgg < 1:2188961/150‑1 (MQ=255) gAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAgg > 2:1827982/1‑150 (MQ=255) aTCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGTTGCCCCTGAACAGGGCAGCTTTTTGA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAg > 2:3995844/1‑150 (MQ=255) aTCAAACTTTCATCCGCATGAGATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAAATGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAGCACTTTCAGGTAg > 1:1757412/1‑150 (MQ=255) cAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGtt < 1:1853012/150‑1 (MQ=255) aCTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGcc > 2:502367/1‑150 (MQ=255) ttCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTc < 2:3491281/150‑1 (MQ=255) ttCATCCGCATGCCTTTAAAGACCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCGGATCTTTTCTACATAAAAAAAACCTGCCACTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTc < 2:4175526/150‑1 (MQ=255) tCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTcc > 1:1155612/1‑150 (MQ=255) cATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCg < 1:4080630/150‑1 (MQ=255) cGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCCCGACCAGCAGATCGTTTCTACATAAAAAAAATCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGaaa < 1:2263317/150‑1 (MQ=255) gCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAAt < 1:3764285/150‑1 (MQ=255) aTGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTGTCTACATAAAAAAAAGCTGCCCCTGAACAGAGCAGCGTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGGCTTCCGGTGATGc > 2:618630/1‑150 (MQ=255) tGGCATTAAAGTCCGCCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGATCAGGGCAGCATTGTCA‑TGACTTTTTCTCCAGCAGGACCACCTTCAGGTAGTTGCCTTCCGCAAATGcc > 2:2721498/1‑150 (MQ=255) ggCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCg > 2:1909365/1‑150 (MQ=255) aTTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAACTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACTACTTTCAGGTAGTTGCCTTCCGGAAATGCCGaaa > 1:274716/1‑150 (MQ=255) aTTAAAGTCCGTCTTGAAGATGGCCCCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGaaa < 1:4222068/150‑1 (MQ=255) ttAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAAt > 2:4609030/1‑150 (MQ=255) ttAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAACCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAAt < 2:5129349/150‑1 (MQ=255) tAAAGCCCGTCTTGAAGATGGGCGCATCGGCGGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATc < 1:3180736/150‑1 (MQ=255) aGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTTCTTTCCGGAAATGCCGAAATCGtt > 2:3149176/1‑150 (MQ=255) aGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGtt < 2:2822397/150‑1 (MQ=255) gcccGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGtta < 2:2135084/148‑2 (MQ=255) tCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAATCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGtttt < 2:766981/150‑1 (MQ=255) ccGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTg > 1:3589455/1‑150 (MQ=255) ttGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGATCAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAAtc < 2:2362668/150‑1 (MQ=255) gAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAAtcct > 2:4857271/1‑150 (MQ=255) aaGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAAtcctc < 2:3795235/150‑1 (MQ=255) gATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAACCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCg < 1:2812710/150‑1 (MQ=255) tGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGACAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGc > 2:2019108/1‑150 (MQ=255) ggCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCa < 1:1114811/150‑1 (MQ=255) cGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCg < 1:5795454/150‑1 (MQ=255) gCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGt > 2:4139649/1‑150 (MQ=255) cATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTa < 1:5086279/150‑1 (MQ=255) cATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAACTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTa < 1:4586375/150‑1 (MQ=255) cATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACACGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGNCGAAATCGTTTTGAAATCCTCCGGCAGCGTa > 1:1476735/1‑150 (MQ=255) aTCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTaa > 2:4275804/1‑150 (MQ=255) cgcgACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCt > 2:3039765/1‑150 (MQ=255) cgACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCa < 1:385722/150‑1 (MQ=255) gACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCaa > 1:1057627/1‑150 (MQ=255) ccAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATg < 1:1563861/150‑1 (MQ=255) cagATCGTTACTACATAAAAAAAAGATTCCCCTGAACAGGGCAGCTTTTACA‑TTATTTTTTCTGCAGAAGTACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCg < 1:1698075/150‑1 (MQ=255) agATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCATCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCgt < 1:1303905/150‑1 (MQ=255) gATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCgtg < 2:4086957/150‑1 (MQ=255) aTCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCgtgt < 1:2052853/150‑1 (MQ=255) tCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTa < 1:3349973/150‑1 (MQ=255) tCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTa < 1:3087355/150‑1 (MQ=255) cGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAg > 2:5296529/1‑150 (MQ=255) tttCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCg > 2:5234168/1‑150 (MQ=255) ttCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGt > 1:928178/1‑150 (MQ=255) tACATAAAAAAATGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCa < 1:517207/150‑1 (MQ=255) tACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAGATTCCTCAATGATCGTGTAGCGTTCa > 2:5422486/1‑150 (MQ=255) cATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCAtt > 2:2236375/1‑150 (MQ=255) aTAAAAAAAGCCTGCCCCTGAACAGGGCATCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCAttt < 1:4289679/150‑1 (MQ=255) aTAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGCCAGAGTAAATTCCTCAATGATCGTGTAGCGATCAttt > 1:4872050/1‑150 (MQ=255) aaaaaaaGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGtt < 2:3255877/150‑1 (MQ=255) aaaaaaaGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGtt > 2:3345360/1‑150 (MQ=255) aaaaGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCt < 1:124575/150‑1 (MQ=255) aaaGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCtt < 1:3651773/150‑1 (MQ=255) aaaGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCtt < 2:259642/150‑1 (MQ=255) aGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTa > 2:5579724/1‑150 (MQ=255) gtcccTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGCAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAgg < 1:5362204/148‑1 (MQ=255) gCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAgg < 2:5484571/150‑1 (MQ=255) gCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAgg < 1:5409835/150‑1 (MQ=255) ccccTGAACAGGGCATCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggc < 1:299074/150‑1 (MQ=255) ccccTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATTCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCGTTTGTTTCTTTAAAggc < 2:4807242/150‑1 (MQ=255) ccccTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggc > 1:347114/1‑150 (MQ=255) cTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGACGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggcggc < 2:1123113/150‑1 (MQ=255) tGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCa < 2:1757410/150‑1 (MQ=255) aaCAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATc > 2:2890964/1‑150 (MQ=255) aCAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCa < 1:4132071/150‑1 (MQ=255) cAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCaa > 2:4438019/1‑150 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCAATaa < 2:4954403/150‑1 (MQ=255) gCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCAATaaa < 2:4682518/150‑1 (MQ=255) caccTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCAATAAAg < 1:2641050/147‑1 (MQ=255) gCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCAATaa < 1:2553531/146‑1 (MQ=255) tttttCA‑TTATTTTTTCTGCAGAAGGACCATTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCAATAAAGCCtt < 1:4486688/150‑1 (MQ=255) ttttCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCAATAAAGCCttt > 1:550993/1‑150 (MQ=255) ttttCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCAATAAAGCCttt < 1:871674/150‑1 (MQ=255) tttCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCAATAAAGCCTTTg < 1:1654866/150‑1 (MQ=255) | GACGAGAGGGACAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCATTTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCATCAATAAAGCCTTTG > BS168_reference_genome/3935674‑3935968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |