| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 696,015 | G→T | 12.4% | intergenic (+31/‑180) | pbuG → / → yebC | hypoxanthine/guanine permease/putative integral inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 696,015 | 0 | G | T | 12.4% | 949.7 / 49.5 | 365 | intergenic (+31/‑180) | pbuG/yebC | hypoxanthine/guanine permease/putative integral inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (189/114); new base T (2/51); total (193/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.81e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 374 total aligned reads displayed.
CCATCGGATTTATTTTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCTTGCTGAATGGTATTC > BS168_reference_genome/695866‑696164 | cATCGGATTTATTTTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGt > 2:845834/1‑150 (MQ=255) cATCGGATTTATTTTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGt > 1:4817270/1‑150 (MQ=255) cATCGGATTTATTTTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGt < 1:79453/150‑1 (MQ=255) cATCGGATTTATTTTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGt > 2:4806272/1‑150 (MQ=255) aTCGGATTTATTTTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGtt < 2:2411300/150‑1 (MQ=255) aTCGGATTTATTTTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGtt < 1:4986292/150‑1 (MQ=255) ggATTTATTTTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGttttt > 2:1852913/1‑150 (MQ=255) ggATTTATTTTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGttttt < 1:5249038/150‑1 (MQ=255) atttatttTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGttttttt > 2:4158140/1‑150 (MQ=255) tatttTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTttgtt < 1:5408243/150‑1 (MQ=255) tttCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCa < 1:1754409/150‑1 (MQ=255) tttCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACAAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCa > 2:2997017/1‑150 (MQ=255) ttCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCaa < 1:5148428/150‑1 (MQ=255) cTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCaaaa > 2:3542469/1‑150 (MQ=255) tATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAg < 2:178909/150‑1 (MQ=255) tATCCGATTACAATGCTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACCTTATCTTTTTAAAATAACGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAGAAg > 2:3412501/1‑150 (MQ=255) aTCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGa > 1:1599278/1‑150 (MQ=255) gATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGAGaaa > 2:80825/1‑150 (MQ=255) ttACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACGAACTGCACTGGCAGAT‑GGTTTTTTTGTTTGAAAAAATAAAAc > 1:4901907/1‑150 (MQ=255) tACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAAGAAGCTGCACTGACAGCT‑TGTTTTTTTGTTTCAAAAAATaaaaac > 1:1052927/1‑148 (MQ=255) aaTGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCAtt < 1:1650695/150‑1 (MQ=255) gtgtGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCAt > 2:4499895/1‑150 (MQ=255) gCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACAAGCTGCACTGGCAGATGGGTTTTTTTGTT‑CAAAAAATAAAAACAATTCATAcca > 1:4607699/1‑148 (MQ=255) cAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGat > 2:4428435/1‑150 (MQ=255) aaaGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAANNCAGCTGCACTGGCAGGT‑GGGTTTTTTTTTTCAAAAAATTAAACCAATTCATACGata > 1:859914/1‑150 (MQ=255) aaaGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAAACAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAAATAAAACCATTTCATACGata > 1:3888841/1‑150 (MQ=255) aaGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCGTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGatat < 1:100828/150‑1 (MQ=255) aaGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGatat > 1:5630614/1‑150 (MQ=255) aaGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAAATAAAACCATTTCATACGatat > 2:5144449/1‑150 (MQ=255) ggAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATAc < 1:2520111/150‑1 (MQ=255) aGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCa > 1:3208706/1‑150 (MQ=255) agagGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGa < 2:3274469/150‑1 (MQ=255) gTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGAtgtg < 2:4937360/150‑1 (MQ=255) ttCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTgc < 1:4676157/150‑1 (MQ=255) ttCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTgc > 1:1892405/1‑150 (MQ=255) tCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTgcc < 2:593604/150‑1 (MQ=255) tCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTgcc < 2:1293277/150‑1 (MQ=255) aTCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGTT‑GGTTTTTTTTTTGTAAAAGATAAAACCATTTCATAGCATATAACGTTCTATTCATGGGCCGCCATGc > 1:2460805/1‑150 (MQ=255) aTCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAAACATTTCATACGATATACCCTCATGTAGATGTGCCGCCATGc > 1:902350/1‑150 (MQ=255) tCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGGCGCCATGCt > 2:3108879/1‑150 (MQ=255) cATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCtt < 2:3705808/150‑1 (MQ=255) tGTCCGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑AGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTa < 1:2037327/150‑1 (MQ=255) gTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTAc < 2:5241909/150‑1 (MQ=255) gTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTAc > 2:1975559/1‑150 (MQ=255) tACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACt < 1:3954491/150‑1 (MQ=255) gCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAAt < 1:5172260/150‑1 (MQ=255) gTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTTTTGCAAAAGATAAAACCATTTAATACGATATACCGTCATGTAGATGTGTCGCCATGCTTTACTTAAATGGa > 1:5329176/1‑150 (MQ=255) tttGTTTTATTTATCCTGTACTTTATCTTCTTAAAATAAGTAATGAAAAACCAGCAGCATTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGaa < 1:3648940/150‑1 (MQ=255) tttGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAAGCAGCTGCACTGGTAGTT‑GGTTTTTTTTTTGTAAAAAATAAAACCATTTCATACGATATACCGTCATATAAATGTGCCGCCATGCATTACTTAAATAGaa > 1:4950998/1‑150 (MQ=255) tATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAAtgactt > 1:4313702/1‑150 (MQ=255) aTTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAAtgacttg < 2:1465027/150‑1 (MQ=255) tttATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAAtgacttga > 2:4729380/1‑150 (MQ=255) ttATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAAtgacttgac > 2:1888608/1‑150 (MQ=255) tCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGt < 2:5281640/150‑1 (MQ=255) cTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTc > 2:2109443/1‑150 (MQ=255) tttACTTTATCTTCTAAAAATAAGGAATAAAAACCCGGTTACATTGGCAGCT‑GTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCa < 1:1244320/148‑1 (MQ=255) cTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGaa < 1:44696/150‑1 (MQ=255) tttATCTTTAAAAAAAAAGGAATAAAAACCCACCTGCATTGGCAGCT‑TGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGAAGATGAGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAg < 1:4521731/150‑1 (MQ=255) tttATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑TTTTTTTTTGTTGCAAAAGATAAAATCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAg < 1:5756870/150‑1 (MQ=255) tATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGc > 2:2881245/1‑150 (MQ=255) tcttctTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCtt > 2:5780895/1‑150 (MQ=255) tcttctTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAAATAAAACCATTTTATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCtt > 1:2988282/1‑150 (MQ=255) tcttAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCgg < 1:2149438/150‑1 (MQ=255) aaacTAAGGAATGAAAAAACCGTTCCTCTGCAAGTG‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTAcc < 1:1837751/150‑1 (MQ=255) aaaTAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCt < 2:5711752/150‑1 (MQ=255) aTAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTta < 1:2885576/150‑1 (MQ=255) aTAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTta > 2:3906145/1‑150 (MQ=255) tAAGGAATGAAAACCCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTtat < 1:229723/150‑1 (MQ=255) acgagtaaaaaaCCAGCAACACTGCGATGA‑GTTTTTTTTTTTGCAAAAGATAAAACCATTTGATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTtatat < 1:2789692/143‑1 (MQ=255) aGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTtatat < 2:1728303/150‑1 (MQ=255) aGGAATGAAAAACCAGCTGCACTGGCAGAT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTtatat > 2:5463850/1‑150 (MQ=255) ggAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTtatata < 2:1039323/150‑1 (MQ=255) ggAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAAATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCAAGCTTTACTTAAATGGAAAAGACTTGACTGTTCAGGAAGGCTTCGGTTCCTtatata > 1:4743606/1‑150 (MQ=255) aaTGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTGGGTACCTTATATAAg > 2:674060/1‑150 (MQ=255) aaTGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAAATGTGCCGCCATGCTTTACTTAAATGAAAATGACTTGACTGTTCAAGAAGGCGTCGGTACCTTATATAAg > 1:5585615/1‑150 (MQ=255) aaTGAAAAACCAGCTGCACTGGCAGCT‑CTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAg < 2:3672440/150‑1 (MQ=255) aTGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGTAGGCTTCGGTACCTTATATAAgt > 1:2659735/1‑150 (MQ=255) aTGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAgt < 2:4027406/150‑1 (MQ=255) tGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATAGAAATGACTTCGCTGTTCAAGAAGGCTTCGGTAGCTTATATAAgtg > 1:6150/1‑150 (MQ=255) aaaaaCCAGCTGCACTGGCAGCT‑GTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGAGtt < 1:1819512/150‑1 (MQ=255) aaaCCAGCTGCACTGGCAGCT‑GTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGtttt < 2:2813048/150‑1 (MQ=255) aaaCCAGCTGCACTGGCAGCT‑GTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGtttt < 1:2174388/150‑1 (MQ=255) cccAGCTGTCCTGGCAGTT‑GTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTAt < 1:508556/149‑1 (MQ=255) aCCATCTGCACTGGCAGCT‑GTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACAATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTATCTTATATAAGTGTTTTAt < 1:3454204/150‑1 (MQ=255) cAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTAttt < 2:2783768/150‑1 (MQ=255) cAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTAttt > 2:5038595/1‑150 (MQ=255) aGCTGCACTGGCAGCT‑GTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTAtttt < 2:5616582/150‑1 (MQ=255) cTGCATTGGCAGCT‑GTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCt < 1:1413419/150‑1 (MQ=255) tGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCtt < 1:332429/150‑1 (MQ=255) tGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCtt > 2:3832210/1‑150 (MQ=255) aCTGGCAGCA‑GGTATTTTTGTTGCTAAAGATAAAACCATTTCATACGATATACCGTCATGTAGACGTGCCGGCATTCTTTACTTAAATGGAAATGACTTAGTTGTTCAGGAAGGCTTCGGTATCTTTTATAAGTGTTTTAGTttctttct > 2:4596991/1‑150 (MQ=255) cTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCTTGCTg > 1:355493/1‑150 (MQ=255) tGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCTTGCTGa > 1:3798176/1‑150 (MQ=255) gCAGCT‑GTTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCTTGCTGAAt < 1:1975559/150‑1 (MQ=255) gCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCTTGCTGAAt > 2:4302835/1‑150 (MQ=255) gCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCTTGCTGAATGGt < 2:3208706/150‑1 (MQ=255) cT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCTTGCTGAATGGTa > 2:2573253/1‑150 (MQ=255) ggTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCTTGCTGAATGGTAtt > 2:5368583/1‑150 (MQ=255) ggTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCTTGCTGAATGGTAtt > 1:4116249/1‑150 (MQ=255) ggTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCTTGCTGAATGGTAtt < 1:762542/150‑1 (MQ=255) | CCATCGGATTTATTTTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTGTCGTATTTATCCTGTACTTTATCTTCTTAAAATAAGGAATGAAAAACCAGCTGCACTGGCAGCT‑GGTTTTTTTGTTGCAAAAGATAAAACCATTTCATACGATATACCGTCATGTAGATGTGCCGCCATGCTTTACTTAAATGGAAATGACTTGACTGTTCAGGAAGGCTTCGGTACCTTATATAAGTGTTTTATTTTCTTGCTGAATGGTATTC > BS168_reference_genome/695866‑696164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |