| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 771,300 | C→T | 25.1% | A356V (GCG→GTG) | rhgW → | rhamnogalacturonan endolyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 771,300 | 0 | C | T | 25.1% | 779.9 / 231.8 | 357 | A356V (GCG→GTG) | rhgW | rhamnogalacturonan endolyase |
| Reads supporting (aligned to +/- strand): ref base C (140/126); new base T (43/46); total (185/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.19e-01 | |||||||||||
Only 100 of 366 total aligned reads displayed.
CGCCGGCATTGCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATGGGGATGCCCTCCATACAG > BS168_reference_genome/771151‑771449 | cccGGCATTGCCTACCTTGATGGACAGCGCCCCAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGCACGCTGGACTCCTCAAAGTCAGGAAATGAAGcc < 1:4608646/149‑2 (MQ=255) ggCATTGCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGttt < 2:5406740/150‑1 (MQ=255) gCATTGCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTg > 1:3856977/1‑150 (MQ=255) cATTGCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGc < 2:4943978/150‑1 (MQ=255) aTTGCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGcc < 2:4505258/150‑1 (MQ=255) aTTGCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGcc > 1:5663225/1‑150 (MQ=255) aTTGCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGcc > 2:3613471/1‑150 (MQ=255) ttGCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCg > 2:5363067/1‑150 (MQ=255) ttGCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCg > 2:2113754/1‑150 (MQ=255) tGCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCgg > 1:1234414/1‑150 (MQ=255) gCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGa > 1:240486/1‑150 (MQ=255) gCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGa < 1:3341167/150‑1 (MQ=255) ccTACATTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACACTAAAACCATGCTAGTTGCCTATAACATCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGAc < 1:4918123/150‑1 (MQ=255) cTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACa > 2:594221/1‑150 (MQ=255) tACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAg < 1:2793383/150‑1 (MQ=255) tACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAg < 2:2973256/150‑1 (MQ=255) aTGGACAGCAGCCGAGCCTGATCATGACCAGAGGATATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATc < 2:1914586/150‑1 (MQ=255) aCAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACaa > 2:1603225/1‑150 (MQ=255) cAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAAc < 1:1532609/150‑1 (MQ=255) cAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAAc < 2:144060/150‑1 (MQ=255) cAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAAc < 1:3966485/150‑1 (MQ=255) aGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAAcc < 1:2164041/150‑1 (MQ=255) aGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAAcc < 1:1469412/150‑1 (MQ=255) cGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTg > 2:5588801/1‑150 (MQ=255) ggCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGa > 2:808228/1‑150 (MQ=255) gAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCAt > 2:5679812/1‑150 (MQ=255) gAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCAt > 1:3010870/1‑150 (MQ=255) gAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCAt > 2:5557453/1‑150 (MQ=255) ccTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATcgc > 2:3067303/1‑150 (MQ=255) aTGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGtt < 1:2071743/150‑1 (MQ=255) aTGACCAGAGGGTATTACGCAAAAACCATGCTAGTTGCCTATAACTTCAGGGAGGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGtt < 1:3140188/150‑1 (MQ=255) tGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTg < 2:2559778/150‑1 (MQ=255) agagGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACggg < 1:612416/150‑1 (MQ=255) ggTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATg > 2:3221829/1‑150 (MQ=255) gTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATgg < 2:2831866/150‑1 (MQ=255) gTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATgg < 2:2018571/150‑1 (MQ=255) aTTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGaa < 2:4278108/150‑1 (MQ=255) ttACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGGAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGCACAGGGGAATCACAACCTGAGCATCGCCGACGGTGACGGGGAGGGaaa > 1:2860437/1‑150 (MQ=255) ttACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGaaa > 1:5034474/1‑150 (MQ=255) tACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGaaaa > 2:4625730/1‑150 (MQ=255) gCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGTCGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGAt > 1:5576575/1‑150 (MQ=255) gCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGAt < 2:4705321/150‑1 (MQ=255) aaaCCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATgaga < 1:4402846/150‑1 (MQ=255) aaCCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGGATCGCGGACGTTGACGGGGATGGAAAAGATGAGat > 1:2750250/1‑150 (MQ=255) aaCCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGat > 2:4558468/1‑150 (MQ=255) aCCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGatt > 2:3877930/1‑150 (MQ=255) aCCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGGCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGata < 1:339986/150‑2 (MQ=255) aCCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGatt > 2:2906017/1‑150 (MQ=255) cATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGTGattat > 1:5305971/1‑150 (MQ=255) aTGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGattatt > 1:725396/1‑150 (MQ=255) aGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCgg > 1:969093/1‑150 (MQ=255) ttGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCTGACAGGGGAATCACAACCTGAGCATCGCGGATGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCt < 1:1012524/150‑1 (MQ=255) ttGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCt > 1:1339468/1‑150 (MQ=255) ttGCCTATAACTTCAGGAACGGAAAGCTGTCAAAACTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCACGGACGTTGACGGGGATGGAAAAGAAGAGATTATTTTCGGCt > 2:4180812/1‑150 (MQ=255) gCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCa > 2:3303213/1‑150 (MQ=255) ccTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCaa > 2:2655906/1‑150 (MQ=255) ccTATAACTTCAGGGACGGAAAGCTGACAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCaa < 2:4790479/150‑1 (MQ=255) cTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAAt < 1:1216627/150‑1 (MQ=255) aaCTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCt > 2:2198843/1‑150 (MQ=255) aCTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTg > 2:3964721/1‑150 (MQ=255) tCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCACCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTg < 2:5102828/150‑1 (MQ=255) aGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGAt > 1:1641892/1‑150 (MQ=255) ggACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCa < 1:4784170/150‑1 (MQ=255) gACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCAt > 2:3163266/1‑150 (MQ=255) aCGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATg > 1:2603581/1‑150 (MQ=255) aCGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTAGTTTCGGCTCAATGGCTGATGATCATg > 2:1762914/1‑150 (MQ=255) cGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGa < 1:3790128/150‑1 (MQ=255) ggAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGAc > 1:891899/1‑150 (MQ=255) ggAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGAc < 1:5741162/150‑1 (MQ=255) ggAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGAc > 2:1398056/1‑150 (MQ=255) ggAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGAc > 1:547046/1‑150 (MQ=255) gAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACg > 1:1005789/1‑150 (MQ=255) cTGTCAAAGCTTTGGACGCTGGCCTCCTCAAAGTCAGGAAATGAAGCGTATGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGTCTGTTGGTCATGACGGGaaa > 2:1104570/1‑150 (MQ=255) tGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAg > 2:412884/1‑150 (MQ=255) aaaGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCAt < 2:2627976/150‑1 (MQ=255) aaGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATg > 2:226444/1‑150 (MQ=255) aaGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATg > 2:3502402/1‑150 (MQ=255) aaGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATg < 1:1733907/150‑1 (MQ=255) aGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGt > 2:3354618/1‑150 (MQ=255) tttGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACt < 1:3533111/150‑1 (MQ=255) ggACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGa < 1:5363067/150‑1 (MQ=255) cTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGc > 2:5130049/1‑150 (MQ=255) cTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGc > 1:4798971/1‑150 (MQ=255) tGGACTCCTCAAAGTCAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCt > 1:293966/1‑150 (MQ=255) ggACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCtt > 1:1407576/1‑150 (MQ=255) ggACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCtt < 1:4549077/150‑1 (MQ=255) aCTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAg > 2:521523/1‑150 (MQ=255) cctcAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGcc > 2:1825376/1‑150 (MQ=255) cAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGGCGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATg < 2:1234414/150‑1 (MQ=255) aGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATgggg > 1:2220202/1‑150 (MQ=255) gTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCAGCTTAGGTCATGGGGa > 2:1737248/1‑150 (MQ=255) tCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATGGGGAt < 1:5178487/150‑1 (MQ=255) ccAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGCCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATGGGGAt < 1:782173/149‑1 (MQ=255) cAGGAAATGAAGTGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATGGGGATg < 2:2353044/150‑1 (MQ=255) ggAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACAGGAAAGGCATGTACTCGACCGGCTTAGGCCATGGGGATGcc < 1:1742027/150‑1 (MQ=255) gAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGAAGGTTGACGGCGATGGAAAAAATGAGATTATTTTCGGCTCAAGGGCTGTTCATCATGACGGCAAAAGCATGTACTCGACCGGCTTAGGCCATGGGGATGccc > 1:190188/1‑150 (MQ=255) tGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATGGGGATGCCCTCCa < 2:716770/150‑1 (MQ=255) aaGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATGGGGATGCCCTCCATa > 1:994384/1‑150 (MQ=255) gCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATGGGGATGCCCTCCATACa < 2:891899/150‑1 (MQ=255) cGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATGGGGATGCCCTCCATACAg > 2:134964/1‑150 (MQ=255) | CGCCGGCATTGCCTACCTTGATGGACAGCGGCCGAGCCTGATCATGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGGGACGGAAAGCTGTCAAAGCTTTGGACGCTGGACTCCTCAAAGTCAGGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGACGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTGATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATGGGGATGCCCTCCATACAG > BS168_reference_genome/771151‑771449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |