Predicted mutation
evidence seq id position mutation freq annotation gene description
RA BS168_reference_genome 2,992,352 C→T 22.5% L755L (TTG→TTA dnaEC ← DNA polymerase III (alpha subunit), DnaE3

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*BS168_reference_genome2,992,3520CT22.5% 824.6 / 186.9 328L755L (TTG→TTAdnaECDNA polymerase III (alpha subunit), DnaE3
Reads supporting (aligned to +/- strand):  ref base C (128/126);  new base T (38/36);  total (166/162)
Fisher's exact test for biased strand distribution p-value = 8.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.55e-01

Only 100 of 329 total aligned reads displayed.

GCGGAGGCTGTATCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCATTTGCAGTGTCTACAGA  >  BS168_reference_genome/2992205‑2992501
                                                                                                                                                   |                                                                                                                                                     
   gAGGCTGTATCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATcc                                                                                                                                                  >  2:5272781/1‑150 (MQ=255)
    aGGCTGTATCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCg                                                                                                                                                 <  2:4445403/150‑1 (MQ=255)
    aGGCTGTATCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCg                                                                                                                                                 >  1:459510/1‑150 (MQ=255)
     ggCTGTATCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGc                                                                                                                                                <  1:1825672/150‑1 (MQ=255)
      gCTGTATCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGca                                                                                                                                               <  1:501476/150‑1 (MQ=255)
       cTGTATCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGcac                                                                                                                                              >  2:1599376/1‑150 (MQ=255)
        tGTATCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGcaca                                                                                                                                             <  2:63457/150‑1 (MQ=255)
         gTATCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACAt                                                                                                                                            >  1:201221/1‑150 (MQ=255)
         gTATCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACAt                                                                                                                                            >  1:5232738/1‑150 (MQ=255)
            tCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATaaa                                                                                                                                         <  1:2623871/150‑1 (MQ=255)
               gACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAata                                                                                                                                      <  1:130500/150‑1 (MQ=255)
                aCAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAatat                                                                                                                                     <  2:2915719/150‑1 (MQ=255)
                   gATTCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAAc                                                                                                                                  <  1:3215756/150‑1 (MQ=255)
                   gATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAAc                                                                                                                                  <  1:3859852/150‑1 (MQ=255)
                   gATCCGGTTTCATCTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGTGTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCCATGACGCTTGTCAGTAATCCGCACATAAAATATAAc                                                                                                                                  <  2:4942167/150‑1 (MQ=255)
                    aTCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACg                                                                                                                                 <  1:5626875/150‑1 (MQ=255)
                       cGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGAt                                                                                                                              <  1:781201/150‑1 (MQ=255)
                        gTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATa                                                                                                                             >  1:4045193/1‑150 (MQ=255)
                           ttCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATg                                                                                                                          <  1:1746010/150‑1 (MQ=255)
                           ttCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATg                                                                                                                          <  2:5462166/150‑1 (MQ=255)
                            tCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGa                                                                                                                         <  1:3302071/150‑1 (MQ=255)
                                  gTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTc                                                                                                                   <  2:2123848/150‑1 (MQ=255)
                                    aaaCGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCaa                                                                                                                 >  2:3965012/1‑150 (MQ=255)
                                     aaCGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCaaa                                                                                                                >  1:1450150/1‑150 (MQ=255)
                                     aaCGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCaaa                                                                                                                >  2:1480176/1‑150 (MQ=255)
                                        ggAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATAc                                                                                                             <  1:1593219/150‑1 (MQ=255)
                                         gAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACg                                                                                                            >  1:3521771/1‑150 (MQ=255)
                                           aaaCTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCa                                                                                                          >  1:4894219/1‑150 (MQ=255)
                                              cTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGc                                                                                                       >  2:3922738/1‑150 (MQ=255)
                                               tGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCt                                                                                                      <  2:1169978/150‑1 (MQ=255)
                                               tGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCt                                                                                                      <  2:5389145/150‑1 (MQ=255)
                                                gCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTg                                                                                                     >  1:1249848/1‑150 (MQ=255)
                                                gCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTg                                                                                                     >  1:3671980/1‑150 (MQ=255)
                                                      aTTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCAccc                                                                                               <  2:3452348/150‑1 (MQ=255)
                                                      aTTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCAccc                                                                                               >  1:5785996/1‑150 (MQ=255)
                                                      aTTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGAATAATGAGCTTTCAAATACGCAAGCTGGCAccc                                                                                               >  1:4194390/1‑150 (MQ=255)
                                                         cACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGAt                                                                                            >  1:269503/1‑150 (MQ=255)
                                                          aCTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATc                                                                                           >  2:27024/1‑150 (MQ=255)
                                                           cTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCa                                                                                          >  2:5349545/1‑150 (MQ=255)
                                                            tGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCAt                                                                                         <  1:725294/150‑1 (MQ=255)
                                                            tGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCAt                                                                                         <  2:746633/150‑1 (MQ=255)
                                                              aCGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGc                                                                                       >  2:339038/1‑150 (MQ=255)
                                                              aCGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGc                                                                                       <  2:2183001/150‑1 (MQ=255)
                                                                  aggaaggaTACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTa                                                                                   <  1:1665005/150‑1 (MQ=255)
                                                                  aggaaggaTACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTa                                                                                   <  2:3073034/150‑1 (MQ=255)
                                                                      aggaTACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGcc                                                                               <  1:3338063/150‑1 (MQ=255)
                                                                      aggaTACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGcc                                                                               <  2:5591218/150‑1 (MQ=255)
                                                                      aggaTACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGcc                                                                               >  2:2257420/1‑150 (MQ=255)
                                                                        gaTACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCAc                                                                             >  1:2189564/1‑150 (MQ=255)
                                                                         aTACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCAcc                                                                            >  1:555214/1‑150 (MQ=255)
                                                                         aTACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCAcc                                                                            >  2:1943256/1‑150 (MQ=255)
                                                                          tACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCg                                                                           <  1:4965086/150‑1 (MQ=255)
                                                                           aCGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGc                                                                          <  2:4136693/150‑1 (MQ=255)
                                                                            cGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCa                                                                         >  1:51629/1‑150 (MQ=255)
                                                                              aaTCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATg                                                                       <  1:4351112/150‑1 (MQ=255)
                                                                                    gCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCt                                                                 >  1:3124533/1‑150 (MQ=255)
                                                                                    gCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCt                                                                 >  1:291126/1‑150 (MQ=255)
                                                                                      tCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGt                                                               >  1:4105809/1‑150 (MQ=255)
                                                                                       ccccTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGtt                                                              >  2:1339252/1‑150 (MQ=255)
                                                                                       ccccTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGtt                                                              <  1:993858/150‑1 (MQ=255)
                                                                                       ccccTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGACAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGtt                                                              <  2:2234980/150‑1 (MQ=255)
                                                                                         ccTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTaa                                                            >  2:1678821/1‑150 (MQ=255)
                                                                                           tttGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAg                                                          <  1:671666/150‑1 (MQ=255)
                                                                                            ttGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATACCACCGCATGGCTTCTGTTAAAGc                                                         <  1:4153473/150‑1 (MQ=255)
                                                                                             tGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGcc                                                        >  2:4091447/1‑150 (MQ=255)
                                                                                               cTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCAt                                                      <  1:4634575/150‑1 (MQ=255)
                                                                                                    tAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGttt                                                 <  2:3277634/150‑1 (MQ=255)
                                                                                                       aGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCg                                              <  2:3525328/150‑1 (MQ=255)
                                                                                                         atatTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACGCGATCATGATGTATGCCACGGCATGGATTTTGTTAAAGCCATAGTTTGCGaa                                            <  1:2471108/150‑1 (MQ=255)
                                                                                                           atTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCAAACGAACATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAAtt                                          <  1:3922738/150‑1 (MQ=255)
                                                                                                            ttGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTGTGTTTAAGCCATAGTTTGCGAAttt                                         >  1:1338284/1‑150 (MQ=255)
                                                                                                                 agaTTTTATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGa                                    >  1:4373552/1‑150 (MQ=255)
                                                                                                                   aTTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGAtt                                  >  2:2508510/1‑150 (MQ=255)
                                                                                                                    ttttATCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTa                                 <  2:5172778/150‑1 (MQ=255)
                                                                                                                     tttATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTaa                                >  2:2964527/1‑150 (MQ=255)
                                                                                                                      ttATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTaaa                               <  1:4790339/150‑1 (MQ=255)
                                                                                                                        aTCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATc                             >  1:4751760/1‑150 (MQ=255)
                                                                                                                        aTCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATc                             <  2:4597468/150‑1 (MQ=255)
                                                                                                                         tCCTCATTGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCg                            <  2:1067520/150‑1 (MQ=255)
                                                                                                                           cTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTa                          <  2:871956/150‑1 (MQ=255)
                                                                                                                             cATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTATTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGa                        >  2:3813481/1‑150 (MQ=255)
                                                                                                                               ttGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGAcc                      >  2:5047208/1‑150 (MQ=255)
                                                                                                                                tGCCAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCt                     >  2:2621115/1‑150 (MQ=255)
                                                                                                                                tGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCt                     >  1:2577061/1‑150 (MQ=255)
                                                                                                                                  ccAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCa                   >  1:3742126/1‑150 (MQ=255)
                                                                                                                                  ccAATGACGCTTGTCAGCAAGCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCa                   <  2:4841397/150‑1 (MQ=255)
                                                                                                                                   cAATGACGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCATAGACCTCAt                  >  2:2670323/1‑150 (MQ=255)
                                                                                                                                   cAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCAt                  <  2:4194390/150‑1 (MQ=255)
                                                                                                                                   cAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCAt                  <  1:5290350/150‑1 (MQ=255)
                                                                                                                                   cAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCAt                  <  1:4433670/150‑1 (MQ=255)
                                                                                                                                   cAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCAt                  >  1:1923302/1‑150 (MQ=255)
                                                                                                                                     aTGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGACACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCAttt                >  1:5478726/1‑150 (MQ=255)
                                                                                                                                      tGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCATTTg               >  1:4128548/1‑150 (MQ=255)
                                                                                                                                      tGACGCTTGTCAGCAATCCCCACATAAAATATAACGGAGAATGCGCTTTCAACAACGCAAGCTGGCACCCGATCAAGCTGTATGCCACCGCATGTCTTCTGTTAAGGTCATAGCTTGCGAATCTGACCATTAAATTGTAAACCTCAGTTg               >  2:3772703/1‑150 (MQ=255)
                                                                                                                                         cGCTTGTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGGTTGCGAATTTGACGATTAAATCGTAGACCTCATTTGCAg            >  1:1050502/1‑150 (MQ=255)
                                                                                                                                             tGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCATTTGCAGTGTc        <  2:4657073/150‑1 (MQ=255)
                                                                                                                                              gTCAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCATTTGCAGTGTCt       >  2:1790733/1‑150 (MQ=255)
                                                                                                                                              gTCAGCAATCCGCACATAAAATATAACGGGTAATGAGCTTTCAAATACGCAAGCTGCCACCGGATCATGCTGGATGTAACCGCATGGCTTCTGTTAAAGCCATAGGTTGCGGATTTGTGGTTTAAATCGTAGACCTCATTTGCAGGGTCt       >  1:288055/1‑150 (MQ=255)
                                                                                                                                              gTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACACGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCATTTGCAGTGTCt       <  2:4257630/150‑1 (MQ=255)
                                                                                                                                                cAGTAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCATTTGCAGTGTCTAc     <  2:5759568/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GCGGAGGCTGTATCTGACAGATCCGTTTTCAACTGTAAACGGAAAACTGCTTTTATTCACTGACGGAGGAAGGATACGAATCCCGCTCCCCTTTGCTTCGTAAAGATATTGAGAGATTTTATCCTCATTGCCAATGACGCTTGTCAGCAATCCGCACATAAAATATAACGGATAATGAGCTTTCAAATACGCAAGCTGGCACCCGATCATGCTGTATGCCACCGCATGGCTTCTGTTAAAGCCATAGTTTGCGAATTTGACGATTAAATCGTAGACCTCATTTGCAGTGTCTACAGA  >  BS168_reference_genome/2992205‑2992501

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: