BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	3,723,091	A→T	intergenic (‑205/‑96)	U712_19190 ← / → U712_19195	PTS system sucrose‑specific EIIBC component/putative transporter ywcJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	3,723,091	0	A	T	100.0%	902.4 / NA	246	intergenic (‑205/‑96)	U712_19190/U712_19195	PTS system sucrose‑specific EIIBC component/putative transporter ywcJ
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (125/121); total (125/121)

Only 100 of 251 total aligned reads displayed.

ACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAAC‑‑T‑G‑TTTT‑TTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTGAACAGTACGCTTTGAACAAAC  >  CP006881/3722945‑3723235

 cacaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAAc                                                                                                                                               >  2:3524581/1‑150 (MQ=255)

  acaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAAca                                                                                                                                              >  2:1140829/1‑149 (MQ=255)

  acaGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAAca                                                                                                                                              >  1:84892/1‑149 (MQ=255)

     gCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAAcatgt                                                                                                                                           <  2:56114/150‑5 (MQ=255)

     gCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAAcatgt                                                                                                                                           <  1:2168287/150‑5 (MQ=255)

           cTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACaa                                                                                                                                     <  1:1946487/150‑1 (MQ=255)

             ttttCATTTCCGCAAATTTTAGGCCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACaaaa                                                                                                                                   <  2:1744801/150‑1 (MQ=255)

             ttttCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACaaaa                                                                                                                                   >  1:1040787/1‑150 (MQ=255)

             ttttCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACaaaa                                                                                                                                   >  2:3859984/1‑150 (MQ=255)

              tttCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACaaaaa                                                                                                                                  >  2:2262846/1‑150 (MQ=255)

              tttCATTTACGCAAATTTTAGGTCTCGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACaaaaa                                                                                                                                  >  1:1637285/1‑150 (MQ=255)

                   tttACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGt                                                                                                                             >  1:3285143/1‑150 (MQ=255)

                    ttACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTTGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTa                                                                                                                            >  2:427668/1‑150 (MQ=255)

                     tACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaa                                                                                                                           >  1:2625919/1‑150 (MQ=255)

                      aCGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaa                                                                                                                          >  2:3465223/1‑150 (MQ=255)

                         cAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaaaat                                                                                                                       <  2:747961/150‑2 (MQ=255)

                               tttggTCTTGCGTGCTTTTCCAGACACAATCGCGCTTATTCAGATTAAGAAAACGCTTTCATCATTAATCATGATAGCGTTTTCGACAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtg                                                                                                                 <  1:3641736/147‑1 (MQ=255)

                                tAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGGAAAAATTaaatgt                                                                                                                >  1:3664282/1‑145 (MQ=255)

                                 aGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtgtg                                                                                                               <  2:1317588/150‑1 (MQ=255)

                                  ggTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGa                                                                                                              >  2:1716541/1‑150 (MQ=255)

                                    tCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTTATTATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaa                                                                                                            >  1:2903014/1‑150 (MQ=255)

                                       tGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATAc                                                                                                         <  1:3270625/150‑1 (MQ=255)

                                          cTGCTTTACCAGTCACAATCCCGCCTGTTCAGATTAAGAATACGCTTTCATCATACATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTc                                                                                                      <  2:1934284/150‑1 (MQ=255)

                                           tGCTTTCCCAGTCCCCATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAGATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                                     <  2:3590696/150‑1 (MQ=255)

                                            gCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcac                                                                                                    >  1:611711/1‑150 (MQ=255)

                                               ttACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAat                                                                                                 >  2:3771997/1‑150 (MQ=255)

                                                 aCCAGTCACAATCCCGCTTATTCAGATCAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGGCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAatat                                                                                               >  1:2136437/1‑150 (MQ=255)

                                                   cAGTCCCAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCg                                                                                             <  2:700455/150‑1 (MQ=255)

                                                   cAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCg                                                                                             <  2:3953125/150‑1 (MQ=255)

                                                     ctCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                           >  2:3205330/2‑150 (MQ=255)

                                                      tCACAATCCCGCTTATTCAGATTTAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAG‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGc                                                                                          <  1:223456/150‑1 (MQ=255)

                                                      tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGc                                                                                          <  1:2494862/150‑1 (MQ=255)

                                                       cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCt                                                                                         <  2:60021/150‑1 (MQ=255)

                                                       cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCt                                                                                         <  2:1123859/150‑1 (MQ=255)

                                                       cacaATCCCGCTTATTCAGACTTAGTATACGCTTTCATCATAAATCCTGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCt                                                                                         <  1:3121199/150‑1 (MQ=255)

                                                        acaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCta                                                                                        >  1:3538811/1‑150 (MQ=255)

                                                             cccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTa                                                                                   >  1:2329418/1‑150 (MQ=255)

                                                                 cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCt                                                                               <  2:388504/150‑1 (MQ=255)

                                                                   tATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCa                                                                             <  1:1107489/150‑1 (MQ=255)

                                                                    aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACTAT‑T‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCa                                                                             >  1:1514022/1‑150 (MQ=255)

                                                                    aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGGAATACTTCACAATATCGTGCTATACTATGCTCaa                                                                            >  1:1963901/1‑150 (MQ=255)

                                                                    aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCaa                                                                            <  2:1902808/150‑1 (MQ=255)

                                                                    aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCaa                                                                            >  2:1594751/1‑150 (MQ=255)

                                                                        aGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                        >  1:113493/1‑150 (MQ=255)

                                                                         gATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAtg                                                                       >  2:2281962/1‑149 (MQ=255)

                                                                          aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAtga                                                                      >  2:808246/1‑148 (MQ=255)

                                                                          aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAtga                                                                      <  1:1227365/150‑3 (MQ=255)

                                                                              agaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaaga                                                                  <  2:3734043/150‑1 (MQ=255)

                                                                              agaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaaga                                                                  <  1:172607/150‑1 (MQ=255)

                                                                               gaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATTATGaaagaa                                                                 <  2:905332/150‑1 (MQ=255)

                                                                               gaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaagaa                                                                 <  2:2473820/150‑1 (MQ=255)

                                                                               gaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTAAACTAAGCTCAATCATGaaagaa                                                                 >  1:2740998/1‑150 (MQ=255)

                                                                                 aTACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaagaaag                                                               <  2:2018985/150‑1 (MQ=255)

                                                                                     gCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAgg                                                           >  2:3230865/1‑150 (MQ=255)

                                                                                      cTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATACTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGa                                                          <  1:2413106/150‑1 (MQ=255)

                                                                                       tttCATCATAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGTAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGaa                                                         >  2:47417/1‑150 (MQ=255)

                                                                                         tcatcaTAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGaaaa                                                       >  2:3061995/1‑150 (MQ=255)

                                                                                          catcatAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATCTAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGaaaag                                                      <  1:3878652/150‑2 (MQ=255)

                                                                                          catcatAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGaaaag                                                      <  2:1091143/150‑2 (MQ=255)

                                                                                           atcatAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGaaaaga                                                     <  2:1330248/150‑3 (MQ=255)

                                                                                            tcatAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGTAAGAAAGAAGGAAAAGAc                                                    >  2:2867696/1‑150 (MQ=255)

                                                                                            tcatAAATCATGATAGCGTTTTCGTCAAC‑‑T‑A‑TTTTATTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGGAAAGAc                                                    >  1:2315938/1‑150 (MQ=255)

                                                                                              atAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACaa                                                  <  2:2757246/150‑1 (MQ=255)

                                                                                               tAAATCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAAt                                                 >  1:1005478/1‑150 (MQ=255)

                                                                                                aaaTCATGATGGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATg                                                <  1:1579256/150‑1 (MQ=255)

                                                                                                aaaTCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATg                                                >  1:501098/1‑150 (MQ=255)

                                                                                                aaaTCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGATTGATCTAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCAGAATATCGTGCTATACTATTCTCAATGAAGAAAGAAAGCAGCAAAAGACAATg                                                <  1:1370430/150‑1 (MQ=255)

                                                                                                 aaTCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATgg                                               <  1:3401359/150‑1 (MQ=255)

                                                                                                 aaTCATGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATgg                                               <  2:2329418/150‑1 (MQ=255)

                                                                                                  atcaTGATTGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGa                                              <  2:144038/147‑1 (MQ=255)

                                                                                                     aTGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAAc                                           >  1:2076253/1‑150 (MQ=255)

                                                                                                     aTGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAAc                                           >  1:1348402/1‑150 (MQ=255)

                                                                                                     aTGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAAc                                           <  2:2625919/150‑1 (MQ=255)

                                                                                                      tGATAGCGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACt                                          >  2:1684033/1‑150 (MQ=255)

                                                                                                            cGTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCa                                    <  2:845040/150‑1 (MQ=255)

                                                                                                             gTTTTCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCAt                                   <  1:61748/150‑1 (MQ=255)

                                                                                                              ttttCGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGGCAATGGAAACTCAAGCAtt                                  >  2:523989/1‑150 (MQ=255)

                                                                                                                  cGTCAAC‑‑TAT‑TTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACaa                              <  1:3390016/150‑1 (MQ=255)

                                                                                                                   gTCAAC‑‑T‑ATTTTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAGTTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGCAAAAGACAATGGAAACTCAAGCATTACaaa                             >  2:3679015/1‑150 (MQ=255)

                                                                                                                            tattgtt‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTCCAAAAGGTTg                       <  2:357234/145‑1 (MQ=255)

                                                                                                                             attttt‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGa                      <  2:2136437/148‑1 (MQ=255)

                                                                                                                             atttgt‑ttGGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGa                      <  1:1872146/145‑1 (MQ=255)

                                                                                                                               tttt‑ttAGTTAAATAGTTTGATTTGACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAAc                    <  1:717874/150‑1 (MQ=255)

                                                                                                                                ttt‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAGTTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACa                   <  1:3466157/150‑1 (MQ=255)

                                                                                                                                ttt‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACa                   <  1:3033241/150‑1 (MQ=255)

                                                                                                                                    ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTa                <  1:1878883/150‑1 (MQ=255)

                                                                                                                                      aGTTAAATAGTTTGATATACCATGTAGACAAAAATTCGTAAAAATTCATTGAGAAATCCTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACACAAGCATTACAAAAGGTTGAACAGTatg              <  2:2412212/150‑3 (MQ=255)

                                                                                                                                       gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGc             >  1:2063996/1‑150 (MQ=255)

                                                                                                                                        ttAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCt            <  2:1872285/150‑1 (MQ=255)

                                                                                                                                        ttAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCt            >  1:2121823/1‑150 (MQ=255)

                                                                                                                                        ttAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCt            <  1:3723335/150‑1 (MQ=255)

                                                                                                                                         tAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCtt           >  2:2747912/1‑150 (MQ=255)

                                                                                                                                            aTAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGa        >  2:291033/1‑150 (MQ=255)

                                                                                                                                            aTAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAACTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGa        <  1:427668/150‑1 (MQ=255)

                                                                                                                                             tAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTaaa       >  2:2840494/1‑150 (MQ=255)

                                                                                                                                              aGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaaa      >  2:2143835/1‑149 (MQ=255)

                                                                                                                                              aGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCAATACAAAAGGTTGAACAGTATGCTTTGaaa      >  1:2633839/1‑149 (MQ=255)

                                                                                                                                              aGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTCCACAATATCGTGCTATACTATGCACAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaaa      <  2:3363028/150‑2 (MQ=255)

                                                                                                                                                tttGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAaaaa    <  2:1514022/150‑1 (MQ=255)

                                                                                                                                                 ttGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCACAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaaaaaa   <  1:119190/150‑1 (MQ=255)

ACACAGCGATCCTTTTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAAC‑‑T‑G‑TTTT‑TTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTGAACAGTACGCTTTGAACAAAC  >  CP006881/3722945‑3723235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`