| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP006881 | = 2913502 | 478 (1.270) | 3 (0.010) | 3/268 | NT | 0.64% | intergenic (‑234/+18) | U712_15010/U712_15015 | 6‑carboxyhexanoate‑‑CoA ligase/Putative hydrolase YtaP |
| ? | CP006881 | 2913534 = | 467 (1.290) | coding (886/900 nt) | U712_15015 | Putative hydrolase YtaP | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCGCTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP006881/2913349‑2913502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttttGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGTT > CP006881/2913534‑2913682 GCGCTTCTCACCTAAATTGTTAACCAATTATATACAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTC < 1:5138495/150‑1 CGCTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCT > 2:5693130/1‑150 CGCTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCT > 1:4011181/1‑150 CGCTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCT > 1:4011183/1‑150 CGCTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCT > 2:289058/1‑150 CGCTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCT < 2:3236232/150‑1 CGCTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCT < 1:4917338/150‑1 GCTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTT < 2:1647242/150‑1 GCTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTT > 1:314580/1‑150 GCTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTT > 2:5473052/1‑150 CTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTTT < 1:4917100/150‑1 CTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTTT < 2:144402/150‑1 CTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTTT < 2:4551822/150‑1 CTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGAACGTTTTCACACAAAACGGTCTTT > 1:2607701/1‑150 TTCTCACTTAAATTGTTAACCAATTATATTCAAACGTTAACAATTAGAATATATTATTCTCTCCTGTTTGTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTTTT < 1:656510/150‑1 TTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTTTT < 2:259354/150‑1 AACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTTTTGCAAAAACCGGACAGCT > 1:1839190/1‑150 TTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTTTTGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCA > 1:2533306/1‑150 TAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTTTTGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCT < 2:1839190/150‑1 CTTTTGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGG < 2:5359584/150‑1 CTTTTGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGATGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGG > 2:826361/1‑150 TTTTGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGC > 2:159699/1‑150 TTTGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCG < 1:5621516/150‑1 TTGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGT > 1:942012/1‑150 TTGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGT < 2:2997348/150‑1 TTGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGT > 1:417048/1‑150 TTGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGT < 2:5092716/150‑1 TTGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGT > 1:3752620/1‑150 TGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGTT < 1:5693130/150‑1 TGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGTT > 2:2781672/1‑150 TGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGTT > 1:5488818/1‑150 TGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGTT < 1:3201462/150‑1 TGCAAAAACCGGACAGCTTCATCCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGTT > 1:621335/1‑150 GCGCTTCTCACCTAAATTGTTAACCAATTATATTCAAAGGTTAACAATTAGAATATATTATTCTCTCCTGTTTCTGTCAATAGAAGAAAGGATCGATTTATGGCAGTTGGTTAAAAGGAAACAAAAAGACCGTTTTCACACAAAACGGTCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP006881/2913349‑2913502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttttGCAAAAACCGGACAGCTTCATGCCTTATAACTGCTGTTTCGAAATGTCCCGAAGCAGAACGGACCACTCGGTAGCAATCAGCAGCTCCCTGTCCAGCATAGACAGCTGTCAATTCTTTTTCGATTTTGTCCACGCCCTCAGCCGGCGTT > CP006881/2913534‑2913682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |