| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,249,253 | C→A | 5.2% | intergenic (‑42/+352) | U712_11310 ← / ← U712_11315 | Riboflavin biosynthesis protein RibD/Uncharacterized protein ypuD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,249,253 | 0 | C | A | 5.2% | 959.6 / 9.3 | 347 | intergenic (‑42/+352) | U712_11310/U712_11315 | Riboflavin biosynthesis protein RibD/Uncharacterized protein ypuD |
| Reads supporting (aligned to +/- strand): ref base C (99/201); new base A (25/2); total (141/206) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.31e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 360 total aligned reads displayed.
AATTTGTCCGTCCTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGTG > CP006881/2249104‑2249402 | aaTTTGTCCGTCCTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGcc < 1:2662067/150‑1 (MQ=255) tGTCCGTCCTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGa < 2:5744177/150‑1 (MQ=255) tGTCCGTCCTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGa < 2:1483936/150‑1 (MQ=255) gtccgtccTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGCTCTAAGGCCAGCTTCATATAATACACTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGaa < 1:2822212/150‑1 (MQ=255) gtccgtccTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGaa > 2:763571/1‑150 (MQ=255) tccgtccTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAAt < 2:4147709/150‑1 (MQ=255) ccgtccTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAAtt < 2:1677945/150‑1 (MQ=255) gtccTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTta > 2:4030993/1‑150 (MQ=255) cTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATaa < 1:3991427/150‑1 (MQ=255) cTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATaa < 1:4133208/150‑1 (MQ=255) cTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATaa > 2:3111697/1‑150 (MQ=255) cGACAACAGCGCCGAGGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAAt < 2:1336486/150‑1 (MQ=255) acaacaGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTc > 2:38673/1‑150 (MQ=255) aacaGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCgg > 1:1990284/1‑150 (MQ=255) aacaGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGAGCCGAATTTATAAAAAATTCgg > 1:575968/1‑150 (MQ=255) cgcCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCtt < 2:1587362/150‑1 (MQ=255) ccGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTa > 2:593374/1‑150 (MQ=255) cgacgaGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAg < 1:5834557/150‑1 (MQ=255) gacgaGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAgg < 1:3693277/150‑1 (MQ=255) gaGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTAt < 2:5183968/150‑1 (MQ=255) aGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTAtt < 1:3057552/150‑1 (MQ=255) aGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTAtt > 1:5107483/1‑150 (MQ=255) ggattggattCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTa > 2:4398479/1‑150 (MQ=255) gattggatcCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTAc < 2:3489088/150‑1 (MQ=255) ttggattCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGc < 1:3302867/150‑1 (MQ=255) ttggattCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCACCGAAATTATAAAAAATTCGGGGCTTTAGGTATTTTACGc > 1:108586/1‑150 (MQ=255) tggattCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCa < 2:2245497/150‑1 (MQ=255) cGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGa < 2:5534696/150‑1 (MQ=255) ggTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGaa > 2:3993067/1‑150 (MQ=255) gTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGaaa < 1:2994140/150‑1 (MQ=255) tctCCTTCCCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTTCATTTGTTTGCTTCTCCTCTTTTGTTATTTACCGTCAAAAAATCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATaa < 1:1746231/148‑1 (MQ=255) tGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCATCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCATTAGGTATTTTACGCAATAGGAAATaa < 1:5041569/150‑1 (MQ=255) ccTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAacac < 2:620681/150‑1 (MQ=255) ttCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGTAAATAACACTa > 1:4367939/1‑150 (MQ=255) tCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACCCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGACAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTAt < 1:1608315/150‑1 (MQ=255) cGCCCTGCTTCGCAAGATCTAAGGACAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATg < 1:2575006/150‑1 (MQ=255) gCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGc < 1:4837745/150‑1 (MQ=255) cTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCAtt < 1:1842974/150‑1 (MQ=255) ttCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTa < 2:233082/150‑1 (MQ=255) tCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTaa < 2:3537195/150‑1 (MQ=255) gCAGGAACTAAGGCCAGCACCATATAGTACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCACGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAAc < 2:5404074/150‑1 (MQ=255) gCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAAc < 2:3718157/150‑1 (MQ=255) cAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATCTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAAAAACACTATGCATTTTTAAACa > 1:1936883/1‑150 (MQ=255) aaGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACAt > 1:4272921/1‑150 (MQ=255) aGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACAtt < 1:3371411/150‑1 (MQ=255) gATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACAttt < 2:3332104/150‑1 (MQ=255) gATCTAAGGCCAGCCTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACAttt < 2:3612337/150‑1 (MQ=255) aaGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCAt < 1:3142529/150‑1 (MQ=255) aGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATa < 2:2529476/150‑1 (MQ=255) ggCCAGCTTCATATAATACTCTTTCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAg < 1:737620/150‑1 (MQ=255) ggCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAg < 2:2964244/150‑1 (MQ=255) ggCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAg < 2:4706806/150‑1 (MQ=255) ggCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAg < 2:1950022/150‑1 (MQ=255) gCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCgggt > 2:4825551/1‑148 (MQ=255) gCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGACCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCt > 2:2596697/1‑150 (MQ=255) tCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCtcat < 2:4195881/150‑1 (MQ=255) tataATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGAACCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTcatcat > 1:145080/1‑150 (MQ=255) tataATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAAAATCGAATTTATAAAAAATTAGGGGCTTTAGGTATTTTACGCAAAAGAAAAAAACACTATGCATTTTTTAACAATTTGCATAGCGGGtcatctt > 1:4569635/1‑148 (MQ=255) taataCTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATcc < 2:4770277/150‑1 (MQ=255) aataCTCTTCCATTTGTTTTCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGTACCGAATTTATAAAAAATTCGTAGCTTTAGGTATTTTACGCAATAACAAATAACACTAAACATTTTTAAACATTATTCTTAGCGGGTCATCTTCCt > 1:4485499/1‑150 (MQ=255) aataCCCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAGAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCt < 1:2284838/150‑1 (MQ=255) ataCTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCtt > 1:3517489/1‑150 (MQ=255) ataCTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCtt < 2:4904607/150‑1 (MQ=255) taCTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTtc > 2:546281/1‑150 (MQ=255) taCTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCACCGAAATTATAAAAAATTCGGGGCTTTAGATATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTtc > 1:4765923/1‑150 (MQ=255) aCTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTtct < 2:1109684/150‑1 (MQ=255) aCTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTtct > 2:4312253/1‑150 (MQ=255) aCTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTtct < 2:2088092/150‑1 (MQ=255) tctTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTcc > 1:5510496/1‑150 (MQ=255) tctTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTcc < 1:4180514/150‑1 (MQ=255) ctTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGAGCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTccc > 2:1436311/1‑150 (MQ=255) ttCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCGCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCa > 1:1021654/1‑150 (MQ=255) tCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGTATAGCGGCTCATCATCCTTCTCCCAt < 2:1044535/150‑1 (MQ=255) tCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGAACCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCAt > 1:2071714/1‑150 (MQ=255) ccATTTGTTTCCCTCCCCTCTTTTGTTAGTTACCGTCAAAAAAGATCCGAATTTATAAAAAATTTGGGGCTTTAAGTATTTTAAGCAATAGGAAATAACACTATGCATTTTTTAACATTTTGCATAGCAGCTCATCATGCTTCTCCCATc > 1:2880819/1‑150 (MQ=255) tttGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAg < 2:5317866/150‑1 (MQ=255) tttGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGAACCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGAAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCAGCTCATCATCCTTCTCCCATCCAg > 1:328327/1‑150 (MQ=255) ttgcctccctcccCTCTTTTGGTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGCGCATTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGa > 1:4431267/6‑150 (MQ=255) ttGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGa > 2:2919517/1‑150 (MQ=255) tttCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGTCCCGGATTTATAAAAAATTCGGGGCTTTAGGGATTTTACGCAATAGGAAAAAACACTATGCATTTTTAAACATTTTGCATTGCAGCTCATCCTCCTTCTCCCATCCAGACtt > 1:375419/1‑150 (MQ=255) ccctcccctcTTTTGTTATTTACCGTCAAAAAAGCTCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTTCCATCCAGACTTTCa > 1:5384940/1‑150 (MQ=255) ctcccctcTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACt > 2:3257164/1‑150 (MQ=255) ctcccctcTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACt > 2:2665531/1‑150 (MQ=255) ctcccctcTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAAATGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACt < 1:221155/150‑1 (MQ=255) ctctTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCgg > 2:5375995/1‑150 (MQ=255) ctTTTGTTATTTACCGTCAAATAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCt < 2:4530782/150‑1 (MQ=255) ttttGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCtt > 2:4979856/1‑150 (MQ=255) ttttGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAACGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGGtt > 2:2441443/1‑150 (MQ=255) tttGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCTGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTc < 1:1235973/150‑1 (MQ=255) tttGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTc > 2:2002053/1‑150 (MQ=255) ttATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGGTTCAGCt > 1:678004/1‑150 (MQ=255) aTTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTa < 1:5641957/150‑1 (MQ=255) cGTCAAAAAAGCACCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACAATTTGCATAGCGGCTCATCATACTTCTCCCATCCAGACTTTCACTGTCGGCTTCGGCTTAAAATGa > 2:1798812/1‑150 (MQ=255) tCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAAt < 1:2477408/150‑1 (MQ=255) aaaaGCCTCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAAAAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCAc > 1:919402/1‑150 (MQ=255) aaaaGCCCCGAATTTATAAAAAATTTGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCAc > 1:4698629/1‑150 (MQ=255) aaaGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTCCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCAcc < 1:1290876/150‑1 (MQ=255) aaGCCCCGAATTTATAAAAAATTCGGTGCTTTAGGTATTTTACGCAATAAGAAATAACACTATGCATTTTTAAAGATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAAACCACcg > 1:3779587/1‑150 (MQ=255) aaGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACcg > 2:2998432/1‑150 (MQ=255) aaGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACcg < 1:2134795/150‑1 (MQ=255) | AATTTGTCCGTCCTTTACGACAACAGCGCCGACGAGCGGATTGGATTCGGTCTGTCCTTCGCCCTGCTTCGCAAGATCTAAGGCCAGCTTCATATAATACTCTTCCATTTGTTTCCCTCCCCTCTTTTGTTATTTACCGTCAAAAAAGCCCCGAATTTATAAAAAATTCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTAAACATTTTGCATAGCGGCTCATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGTG > CP006881/2249104‑2249402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |