| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,370,905 | C→A | 7.4% | intergenic (+51/+42) | U712_12015 → / ← U712_12020 | HTH‑type transcriptional regulator sinR/Spore coat‑associated protein N |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,370,905 | 0 | C | A | 7.4% | 795.6 / 13.5 | 323 | intergenic (+51/+42) | U712_12015/U712_12020 | HTH‑type transcriptional regulator sinR/Spore coat‑associated protein N |
| Reads supporting (aligned to +/- strand): ref base C (73/180); new base A (26/2); total (141/182) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.94e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 331 total aligned reads displayed.
AAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGTTCCACTGTGTAGCTTCGAATGA > CP006881/2370756‑2371054 | aaaTTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGc > 2:5151693/1‑150 (MQ=255) tGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGGAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCTCaa > 1:1923861/1‑149 (MQ=255) ggTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGt < 2:3988557/150‑1 (MQ=255) ttCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGtat < 1:5218184/150‑1 (MQ=255) cgcgATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTatat < 1:2878269/150‑1 (MQ=255) gcgatgcgatGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATg < 2:5496337/150‑1 (MQ=255) cgatgcgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGa < 1:471347/150‑1 (MQ=255) cgatgcgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGACTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGGCCAGTATATGa > 2:4385270/1‑150 (MQ=255) cgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACt < 1:1780857/150‑1 (MQ=255) gatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACAAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTg > 1:142970/1‑150 (MQ=255) tgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTggg < 1:5786505/150‑1 (MQ=255) aCATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATGCAGAGGGGCCAGTATATGAATACTGGGcc > 1:1464283/1‑150 (MQ=255) aCATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGcc < 1:2147788/150‑1 (MQ=255) aCATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGcc < 1:5607074/150‑1 (MQ=255) aCATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACNGGGcc < 1:5830962/150‑1 (MQ=255) cATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATAAGAATACTGGGCCg < 1:5403379/150‑1 (MQ=255) aTCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGt > 2:4993970/1‑150 (MQ=255) gggTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑tt < 2:4898958/150‑1 (MQ=255) ggaaTCGAAAAAACAATTTCGTGAATTTTTAGATAATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTACCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑ttt < 2:2821571/147‑1 (MQ=255) gTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑tttt < 1:2357214/150‑1 (MQ=255) tATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGTCCAGTATATGAATACTGGGCCGTGTC‑ttttt > 2:537437/1‑150 (MQ=255) cGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGGGACGGACGAGAATATTAATAATTGGACGTAtt‑tttttttt > 1:726264/1‑150 (MQ=255) cGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGACCGTCTC‑tttttttt < 2:653302/150‑1 (MQ=255) cGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGACCAGTATATGAATACTGGGCCGTCTC‑attttttt > 1:2242155/1‑150 (MQ=255) gAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑ttttttttt > 1:1089942/1‑149 (MQ=255) gAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGACCAGTATATGAATACTGGGCCGTCTC‑ttttttttt > 2:3616730/1‑149 (MQ=255) aaaaaaCAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGc > 2:1776800/1‑150 (MQ=255) aaaaaCAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGTGCAGAGGCACTAACTCCTCTTTTGTCAATAACAATAGAGAAGGTCCAGTATATGATTACTGTGCGCTGtt‑ttttttttttt > 1:954268/1‑147 (MQ=255) aaaaaCAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCt < 1:2543120/150‑1 (MQ=255) aaaaaCAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCt < 1:2000883/150‑1 (MQ=255) aaaCAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGt < 2:5178054/150‑1 (MQ=255) aaCAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGTGCCGTCTC‑TTTTTTTTgttgtt > 2:3117936/1‑150 (MQ=255) ataaTTTGGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGtta < 2:36929/148‑1 (MQ=255) aCAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCCAGAAGGTGCAGTATATGGATAATGTGAAGTGAG‑TTTTTTTTgtttttt > 1:1318595/1‑144 (MQ=255) cAATTTGGTGATTTTTTAGATTATCAAAAATGAAGAAAATCCCAAAAATAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGACAATAACCATCGAGACGGCCCAGTATATGAATACTGGTCCGTCTC‑TTTTTTTTGCTGttat < 2:2605982/150‑1 (MQ=255) cAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGGCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTTCTGttat > 1:3445136/1‑150 (MQ=255) cAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGttat > 1:4935111/1‑150 (MQ=255) aaTTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCGTGAGCAGTGGCACTAACTCCTCTTTTGTCAATAACCATCGAGAGGGGCCAGTAGATGAATACTGGGGCGTATC‑TTTTTTTTTCTTttatt > 1:4609230/1‑150 (MQ=255) aaTTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGTCCGTCTC‑TTTTTTTTGCTGttatt < 1:1713547/150‑1 (MQ=255) cGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAAttt < 1:5036538/150‑1 (MQ=255) cGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAAttt > 2:2227752/1‑150 (MQ=255) aaTTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTAt > 1:3376/1‑150 (MQ=255) aaTTTTTAGATTATAAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTAt < 1:4263595/150‑1 (MQ=255) aTTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTTTc > 2:1385787/1‑150 (MQ=255) ttgttAGATTAACAAAAATGGAGAAAATCCCAAAAAGAGTAGTAGTGTGTAAGAAGAGTTACTAACACCCCTTTTGTCAATAATCATCGAGACGGCCCACTATATGAATACTGGTCCATATC‑TTTTTTTTGCTGTTATTAATTTTTATcc < 1:4745387/147‑1 (MQ=255) ttttAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGACCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTTTTGTTATGTATTTNTATTCt > 1:3228406/1‑150 (MQ=255) tttAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTTTC‑TTTTTTTTTCTTTTATTAATTTTTATCCTc > 2:2624319/1‑150 (MQ=255) tttAGATTACCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTc < 2:1080403/150‑1 (MQ=255) ttAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGTCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTTATTTTTATCCTCg > 1:307274/1‑150 (MQ=255) aGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGAAGGACCAGGATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTTTTAATTTTTATTCTCGCt > 1:4079998/1‑150 (MQ=255) gATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACTGACCAGTATATGAATACTGGGCCGTCTG‑TTTTTTTTTCTGTTATTAATTTTTATtctctcct > 1:4856945/1‑146 (MQ=255) ttATCAAAAATGGAGAAAATGCCAAAAAGAGAAGTAGTGCCTGAGCATAGGCACTAACTCCTCTTTTGTCAATAACCATCTATACGGAAAAGTAAATGAATTCTGGGTCGTCTC‑TTTTTTTTTTTTTTATTTATTTTTTTCctctcttta > 1:1655346/1‑147 (MQ=255) ttATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATg < 1:4665640/150‑1 (MQ=255) tATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATgc < 2:1561260/150‑1 (MQ=255) tATCAAAAATGGAGAAAATCCCAAAAAGAGGACTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGTCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATgc < 2:189171/150‑1 (MQ=255) cAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGGCCAGTATATGAATACTGAGTCGTTTCTTTTTTTTTTTTTTTATTTATTTTTTTTCTTGCTAtttgt > 1:1143704/1‑146 (MQ=255) aaaaTGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGAATATGAATACTGGGCCCTCTG‑TTTTTTTTGTTGTTATTTATTTTTATCCTCGCTATGCGGttt > 1:4187672/1‑150 (MQ=255) aaaTGGAGAAAATCCCAAAAAGAGAAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGACCAGTATATGAATACTGGGCCGTTTC‑TTTTTTTTTGTTTTATTAATTTTTATTCTCGCTATGCACtttt > 1:3470430/1‑150 (MQ=255) taTGGAGAAAATCCAAAAAAGGGGAGAAGTGCCTGAACAGAGGCACTAACACCTCTTTTGACAATAACCATCGAGACGGACCAGTATATAAATACTGGCCCATCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCttttt < 1:3151346/149‑1 (MQ=255) aaTGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGTGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGATGGCCCAGTATATGAATACTGGGCCCTAAC‑TTTTTTTTTGTGTTATTAATTTTTATTCCCCCTATACCCttttt > 2:4594430/1‑150 (MQ=255) gagaAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGCCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCAtt < 2:2553559/150‑1 (MQ=255) gagaAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGACCAGTATATGAATAATGGGCCGTCTC‑TTTTTTTTTTTTTTTTTTATTTTTTTCCTTGCCTTGCCTTTTTTCAtt > 1:846604/1‑150 (MQ=255) gaAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTTGGCCGTCTC‑TTTTTTTTTCTGTTATTTATTTTTATTCTCCCTATGCGCTTTTTCCtttt > 1:4417548/1‑150 (MQ=255) aaaTCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGAAGGACCAGTATATGAATACTGGGCCGTATC‑TTTTTTTTTCTGTTATTAAATTTTATTCTTGTTATGCTGTTTTTGATtttct > 1:3611284/1‑150 (MQ=255) aaTCCCTAAAAAAGGACTAGTCCCTAAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGCCCTTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATtttctt < 1:1019938/150‑1 (MQ=255) aaTCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATtttctt < 2:4787525/150‑1 (MQ=255) aTCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGCCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATtttcttt < 1:4326959/150‑1 (MQ=255) tctcAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGCCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATtttctttc < 2:2729600/147‑1 (MQ=255) ccAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGACCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTTTCCTCGCTATGCGCTTTTTCATTTTCTTTTAc > 1:796836/1‑150 (MQ=255) aggagTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGTCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCAt < 1:5343274/150‑1 (MQ=255) agtagtGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGTCCAGTATATGAATACTGGGCCGTGTC‑TTTTTTTTTCTGTTATTTATTTTTTTCCTCGCTTTGCTCTTTTTCATTTTTTTTCACGTAACCATCtt > 2:2342769/1‑150 (MQ=255) agtagtGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATAATGGGCCGTCTC‑TTTTTTTTTCTTTTATTAATTTTTATCCTCCCTATGCCCTTTTTTATTTTTTTTTACGTAACCATcct > 1:635805/1‑148 (MQ=255) tagtGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATAATGGGCCGAGTC‑CTTTTTTTTCTGTTATTAATTTTTTTCCTCGCTATGCGCTTTTTCATTTTCTTTCACGGAACCAACtttt > 1:3912046/1‑149 (MQ=255) tagtGCCTGAGCAGAGCCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTa < 2:3421008/150‑1 (MQ=255) agtGCCTGAGCAGAGCCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGTCCTTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTAt < 2:5277906/150‑1 (MQ=255) ccTGAGCAGAGGCACTAACTCCTCTTTTGCCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGt < 2:4687724/150‑1 (MQ=255) cTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTa > 2:3280709/1‑150 (MQ=255) cTGACCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGCCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTa < 1:3796084/150‑1 (MQ=255) gAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTATC‑TTTTTTTTGCTGGTATTAATTTTTATCCTCGCTATGTCCTTTTTTATTTTCTTTTACATAAGAAGCTTTTTCAGTATg > 1:2419908/1‑150 (MQ=255) agGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTAATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTAACGTCCtg < 1:5458804/150‑2 (MQ=255) cACTAACTCTTCTTTTGTCAATAACCATCGAGACGCCCCAGTATATGAATACTGGTCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCttttt < 2:726264/150‑1 (MQ=255) aCTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTTATTTTTTTTCTCGCTTTGCGCCTTTTTATTTTCTTTCTAGTAACCATCTTTATCAATATGGTCCTTTTTGATTg > 1:4237721/1‑150 (MQ=255) aCTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTATC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTtttgtttg > 1:122099/1‑150 (MQ=255) cctcTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTTTCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCa > 2:2475701/1‑150 (MQ=255) tctTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAg > 2:5126917/1‑150 (MQ=255) tctTTTGTAAATAACCATCGACACGGCCCAGTATATGAATACTGGTCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAg < 1:3117934/150‑1 (MQ=255) ctTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGc > 1:3729759/1‑150 (MQ=255) ctTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGc < 2:2381910/150‑1 (MQ=255) tGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGTCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGtt < 2:5652448/150‑1 (MQ=255) cAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATTTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGATCCa > 2:824531/1‑150 (MQ=255) aaTAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGTTCCAc > 1:2813297/1‑150 (MQ=255) aTCGAGACGGCCCAGTATATGAATACTGGGCGGTGTC‑TTTTTTTTGCTGTTATTAATTTTTATACTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGGATGGTCCTTTTTGATTGTCAAGCCGTTCGACTGTGTAg > 1:4814953/1‑150 (MQ=255) tcaagaCGGCCCAGTATATGAATACTGGTCCTTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGTTCCACTGTGTAGc < 2:4856935/147‑1 (MQ=255) gagaCGGCCCAGTATATGAATACTGGCCCTTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGTTCCACTGTGTAGCtt < 2:3228408/150‑1 (MQ=255) agaCGGCCCATTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGTTCCACTGTGTAGCTTc < 1:557533/150‑1 (MQ=255) gCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGTTCCACTGTGTAGCTTCGAATg > 1:4788063/1‑150 (MQ=255) gCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGTTCCACTGTGTAGCTTCGAATg > 2:2854729/1‑150 (MQ=255) gCCCAGTATATGAATACTGCCCCTTCTC‑TTTTTTTTGGTGTTATCAATTTTTCTCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGTTCCACTGTGTAGCTTCGAATg < 2:2115424/150‑1 (MQ=255) cccAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGTTCCACTGTGTAGCTTCGAATga > 2:4217179/1‑150 (MQ=255) cccAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGTTCCACTGTGTAGCTTCGAATga > 2:3582976/1‑150 (MQ=255) | AAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCTC‑TTTTTTTTGCTGTTATTAATTTTTATCCTCGCTATGCGCTTTTTCATTTTCTTTCACGTAACCATCTTTATCAGTATGGTCCTTTTTGATTGTCAAGCCGTTCCACTGTGTAGCTTCGAATGA > CP006881/2370756‑2371054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |