Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP006881 2,807,680 T→C 7.3% intergenic (‑261/+74) U712_14470 ← / ← U712_14475 Acetyl‑coenzyme A carboxylase carboxyl transferase subunit beta/putative NAD‑dependent malic enzyme 4

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,807,6800TC 7.3% 760.8 / 10.0 339intergenic (‑261/+74)U712_14470/U712_14475Acetyl‑coenzyme A carboxylase carboxyl transferase subunit beta/putative NAD‑dependent malic enzyme 4
Reads supporting (aligned to +/- strand):  ref base T (149/141);  new base C (3/34);  total (152/187)
Fisher's exact test for biased strand distribution p-value = 2.43e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 348 total aligned reads displayed.

CTCAATTCGACAACTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGATTCTTGCAACACCT  >  CP006881/2807531‑2807829
                                                                                                                                                     |                                                                                                                                                     
 tCAATTCCACAACTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTc                                                                                                                                                      <  1:2927968/150‑1 (MQ=255)
  cAATTCGACAACTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGTTGAAATTTTTTTTAGGCTAACCCCCTAAAAAAAATTCa                                                                                                                                                     >  1:5291280/1‑150 (MQ=255)
  cAATTCGACAACTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCa                                                                                                                                                     <  2:705570/150‑1 (MQ=255)
  cAATTCGACAACTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGATGAAATTTTTTTAAGGCTAACCCCCTAAAAAAAATTCa                                                                                                                                                     >  2:4787442/1‑150 (MQ=255)
   aaTTCGACAACTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACGAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAg                                                                                                                                                    <  1:2167182/150‑1 (MQ=255)
       cGACAACTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGt                                                                                                                                                <  1:2242824/150‑1 (MQ=255)
       cGACAACTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCAGGATGGAATTTTTTTAAGGGTAAACCCCTAAAAAAAATTCAGCCGt                                                                                                                                                >  2:4513014/1‑150 (MQ=255)
        gACAACTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGGGGAAATTTTTTTTAGGCTAACCCCCTAAAAAAAATTccaccctc                                                                                                                                               >  2:2507570/1‑143 (MQ=255)
         aCAACTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTTTGGCTAACCCCCTAAAAAAATTTCAGACGTCa                                                                                                                                              >  1:5010293/1‑150 (MQ=255)
            aCTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGTCGGAATTTTTTTTAGGGTAACCCCCCTAAAAAAATTCTGCCGTTAGtt                                                                                                                                           >  2:5055129/1‑150 (MQ=255)
            aCTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCAGTTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAAtt                                                                                                                                           >  2:1829530/1‑150 (MQ=255)
               ttttATTCGATGACGTGCACGGAAAGGCTTGTATAAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCACCCGTCAGTTTaa                                                                                                                                        <  2:2821274/150‑1 (MQ=255)
                  tATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACtt                                                                                                                                     <  1:4398177/150‑1 (MQ=255)
                  tATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACtt                                                                                                                                     >  2:1905841/1‑150 (MQ=255)
                     tggATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTCCACCCGTCAGTTTAACTTgag                                                                                                                                  <  1:5585907/148‑1 (MQ=255)
                        aTGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTTAGCCGTCAGTTTAAATTGTGAAc                                                                                                                               >  2:5572353/1‑150 (MQ=255)
                         tGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGATGTAATGTTTTTAAGGCTCAACCCCTAAAAAAAATTCTGCCCTTAGTTTTACATtagataa                                                                                                                              >  1:719557/1‑147 (MQ=255)
                          gACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAg                                                                                                                             <  2:2591510/150‑1 (MQ=255)
                          gACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCCTCAGTTTAAATTTAGAACAg                                                                                                                             >  2:2367491/1‑150 (MQ=255)
                           aCGTGCTGGGAAAGCTTTGTATGAAATCAGATAAGGTGTTGAAACCACAAGGTTGACAGCGCATAAAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCTCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAgc                                                                                                                            <  1:866017/150‑1 (MQ=255)
                           aCGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCACCCGTCAGTTTAACTTGAGAACAgc                                                                                                                            <  2:1671138/150‑1 (MQ=255)
                            cttGCTGGAAAAGGCTTGTATGAAATAAGATAAGGTGTTGAAACGACAAGGTTGACAGCCCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTACCCCCCTAAAAAATTTCCACCCGTCAGTTTAACTTGAGAACAgcg                                                                                                                           <  2:1145537/148‑1 (MQ=255)
                             gTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGCCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAgcgc                                                                                                                          <  1:5626457/150‑1 (MQ=255)
                               gCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAgcgcgc                                                                                                                        >  1:2284775/1‑150 (MQ=255)
                                     aaaGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTTAGGCTAACCCCCTAAAAAAAATTCAACCCTCAATTTTACTTTTGAAAAGCGCGCCGGtct                                                                                                                  >  2:4447963/1‑150 (MQ=255)
                                      aaGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTCGACAGCGGATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCTCCTAAAAAAATTGCACCCGTCAGTTTAACTTGAGAACAGCGCGCCGGtctc                                                                                                                 <  1:5415732/150‑1 (MQ=255)
                                      aaGGCTTGAATGAAAATAGATAAGGTGTTGAAACAACAAGGTTGACAGAGCATTCAAAAATAATGTTAAACCGGGCTGAAATTTTTTTAAGGCTAACCCCATAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGtctc                                                                                                                 <  1:2828016/150‑1 (MQ=255)
                                          cTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCATCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGcc                                                                                                             <  1:749368/150‑1 (MQ=255)
                                          cTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCACCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGcc                                                                                                             <  1:1957182/150‑1 (MQ=255)
                                                 gAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACgcgc                                                                                                      <  2:1440414/150‑1 (MQ=255)
                                                  aaaTCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGCCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAACTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCt                                                                                                     <  1:3852384/150‑1 (MQ=255)
                                                   aaTGAGATAAGGTGTTGAAACAACAAGGTTGACAGCGCATACAAAAATAATGTTAAACCCGGTTGAAATTTTTTTAAGCCTACCCCCCTAAAAAAATTTCAACCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTg                                                                                                    <  1:4350641/150‑1 (MQ=255)
                                                    aTCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGc                                                                                                   <  2:3110829/150‑1 (MQ=255)
                                                     tCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGGTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGTGAACAGCGCGCCGGTCTCCCCCAACGCGCTGcc                                                                                                  >  1:3421054/1‑150 (MQ=255)
                                                     tCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCTTAAAAAAATTTCATCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGcc                                                                                                  <  1:3346146/150‑1 (MQ=255)
                                                     tCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGcc                                                                                                  <  2:2686978/150‑1 (MQ=255)
                                                       aGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGGAATTTTTTTTAGGCTAACCCCCTAAAAAAAATTCAGCCGTCAGTTTAACTTTAGAACAGCGCGCCGGTCTCCGCCCACGCGCTGCCAt                                                                                                >  1:3935687/1‑150 (MQ=255)
                                                           aaGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCAAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCAttttt                                                                                            <  2:4912289/150‑1 (MQ=255)
                                                             ggTGTTGAAACGACAAGGTTGACAGGGCATACAAAATTAATGTTAAACCCGCCTGAAATTTTTTTAAGGCTAACCCCATAAAAAAATTTCACCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTgg                                                                                          <  1:1159695/150‑1 (MQ=255)
                                                                 ttGAAACGACAAGTTTGACAGCGCATTAAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCACCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGgaatg                                                                                      <  1:486138/150‑1 (MQ=255)
                                                                 ttGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGgaatg                                                                                      <  2:5710692/150‑1 (MQ=255)
                                                                   gAAACGACAAGGTTGAGAGCGCATACAAAAATAATGTTAACCCCGGCTGAAATTTTTTTAAGCCTAACCCCCAAAAAAAATCACACCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGgaatgaa                                                                                    <  2:1584144/150‑1 (MQ=255)
                                                                   gAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTTAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCCCCAACGCGCTGCCATTTTTGgaatgaa                                                                                    >  1:3048495/1‑150 (MQ=255)
                                                                       cGACAGGGTTCGCAGCGCATACAAAAATAATGTCAACCCCGACGTAATTTTTCTTAAGGCTCACCCCCTAAACAAATACCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGACCCCGCCATCGCGCTGCCATTTTTGGAATGAATTaa                                                                                <  1:472077/150‑1 (MQ=255)
                                                                        gACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGTTGAAAATTTTTTAAGGCTAACCCCCTAAAAAAATTTTAACCGTCAGTTTATCTTGTGTATAGCGCGGCGGTCTCCGCCAACCGGCTTCCATTTTTGGTAGGAATTaaa                                                                               >  1:5721837/1‑150 (MQ=255)
                                                                         aCAAGGTTGACAGCGCATTCAAAAATTATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCACCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTaaaa                                                                              <  2:3082727/150‑1 (MQ=255)
                                                                         aCAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCATCCATCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTaaaa                                                                              <  1:1892071/150‑1 (MQ=255)
                                                                            aGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGAATGAAATTTTTTTAAGGCTAAACCCCTAAAAAAATTTTAGCCATCAGTTTAACTTGAGAACAGAGCGCCGCTCTCCGCCCCCGCGCTGCCATTTTTGGAATGAATTAAAatta                                                                           >  1:1355867/1‑150 (MQ=255)
                                                                             ggTTGACAGCGCATTCAAAAATAATGTTAAACCCGGTTGTAATTTTTTTAAGGATAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAAAAATGGGCCGGTCTCTCCCAACGCGCTGCCATTTTTGTAATGAATTAAAattat                                                                          >  1:3619997/1‑150 (MQ=255)
                                                                             ggTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGGTAACCCCCCAAAAAAAATTCAGCCCTCAGTTTAACTTTAGGACAGCGCGCCGGTCTCCGCCCACGCGCTGCCATTTTTTGAATGAATTAAAaatat                                                                          >  2:595556/1‑150 (MQ=255)
                                                                              gTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGGAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGGCAGTTTAAATTTAGGACAGCGGGCCGGTCTCCGCCCACGCGCTGCCATTTTTGGAATGAAATAAAaatatt                                                                         >  2:3312818/1‑150 (MQ=255)
                                                                              gTTGACAGCGCATCCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAACCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAattatt                                                                         <  2:5648417/150‑1 (MQ=255)
                                                                               ttGACAGCGCATTCAAAAATAATGTTAAACCCGGCGGGCATTTTTTTCAAGGTTACCCCCTAAAAAAATTTCAAACGTCAACTTAACTTGAGCACAAGCCGCCGGGCTCCGGCAACGCCCATGCAGTTTTGGAATTCATTAAAAATAATc                                                                        >  2:3453548/1‑150 (MQ=255)
                                                                                tGACAGCGCATTCAAAAATAATGTTAAACCCAGAAGAAAATTTTTTTAGGCTGACCCCCTCAAAAAAATTCAACCCTCAGTTTAACTTGAGAAAAGCGCGGCGGGCTCCGCCCACGCGCTGCCCATTTTGGGAAGGATTAAAaatattta                                                                       >  2:1542171/1‑148 (MQ=255)
                                                                                   cAGCGCATTCAAAAATAATGTTAAACCCGGTTGAAATTTTTTTTAGGCTAACCCCCTAAAAAAATTTCTGCCGTCAGTTTAACTTGGGAACAGCGCGCCGGTCTCCCCCAACGCGCTGCCATTTTTGTAATGAATTAAAATTATTTACCa                                                                    >  1:104041/1‑150 (MQ=255)
                                                                                   cAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGGAAAGCGCGGCGGTCTCCGCCCACGCGCTGCCATTTTTGGGATGAATTAAAATTATTCAACa                                                                    >  2:3826106/1‑150 (MQ=255)
                                                                                      cgcATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCATCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCaata                                                                 <  2:3578852/150‑1 (MQ=255)
                                                                                       gcATTCAAAAATAATGTTAAACCCGACTGAAATTTTTTTAAGGCTAAACCCCTAAAAAAATTTCAGCCGTTAATTTAACTTGTGAAGAGAGCCACCGTGTCCCCCAACGCGCTGGCATTTTTTGAAAGGATTAAAATTATTGACCaaaaa                                                                >  1:968101/1‑150 (MQ=255)
                                                                                        cATTCAAAAATAATGTTAAACCACCTCGAAAATTTTTTAAGGCGAAAACCCTTAAAAAATTTAAGCCGTGAGGTTAACTTGAGTAGAGTGTACCGGCATCCGCCAGTCCCCTTGCCTTTTTGTCATCAATTAAAAATATTTACGaataaa                                                               >  1:5171953/1‑149 (MQ=255)
                                                                                        cATTAAAAATTAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCATCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCaataat                                                               <  2:18468/150‑1 (MQ=255)
                                                                                        aatacAAAAATAATTTTAAACCGGGCTGAATTTTTTTTAAGGCTACCCCCCTAAAAAAATTCCATCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCaataat                                                               <  1:4286336/146‑1 (MQ=255)
                                                                                          ttCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCATCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCg                                                             <  2:5486645/150‑1 (MQ=255)
                                                                                           tCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTTAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGGTTAACTTGAGAACAACGCGCCGGTGCCCGCCAACGCCCCGCCGTTTTTTGAATGTATTAAAATTATTTACCAATAATCGt                                                            >  1:2519947/1‑150 (MQ=255)
                                                                                           tCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAATAAAATTCCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGt                                                            <  2:4091579/150‑1 (MQ=255)
                                                                                              aaaaTAATGTTAAACCCGGATTAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCGGTCAGTTTAACTTGAAGACGGCGCCACGGGCTCCGCCAACCCGCTGCCCTTTTTGGAATGAATTAAAATTATTTAACAATAAACGttaa                                                         >  1:2703540/1‑147 (MQ=255)
                                                                                               aaaTAATGTTAAACCTGGCTGAAATTTTTTTAAGGCTAACACCATAAAGAAATATCATCTGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCAGCAATAATCGTAAGt                                                        <  1:2036547/150‑1 (MQ=255)
                                                                                                 ataatGTTAACCCCGGCTGAAATTTTTTTAAGGCTAACCCCATAAAAAAATTTCACCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGttt                                                      <  1:601948/150‑1 (MQ=255)
                                                                                                  taatGTTAAACCCGGTTGGAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTTAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGtttt                                                     >  1:5688838/1‑150 (MQ=255)
                                                                                                  taatGTTAAACCAGGCTGAAATTTTTTTAAGGCAACCCGCCTAAAAAAATTACAACCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGTCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGtttt                                                     <  1:1626987/150‑1 (MQ=255)
                                                                                                      gTTAAACCGCTCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTg                                                 <  1:3510275/150‑1 (MQ=255)
                                                                                                      gTTAAACCCGGTTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAAATTCAGCCGTCAGTTTAACTTGAGAAAAGCGGGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTg                                                 >  1:4095157/1‑150 (MQ=255)
                                                                                                       ttAACCCCGCTTGAATTTTTTTAAAGCCTACCCCCCTAAAAAAATTCCACCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGt                                                <  1:4564222/150‑1 (MQ=255)
                                                                                                        tAACCCCGGTTGAATTTTTTTTAAGGTTAACCTCATAAAAAAATTTCAACCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGtt                                               <  1:1811338/150‑1 (MQ=255)
                                                                                                        tAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTACATCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGtt                                               <  2:3986546/150‑1 (MQ=255)
                                                                                                         aaccccGGCTGAAATTTTTTTAAGGCCAACCCCCTAAAAAAATTCCATCAGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGttt                                              <  1:4216672/147‑1 (MQ=255)
                                                                                                            cccGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGTCGTCAGTTTAACTTGAGGACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTCtttttt                                           >  1:3280731/1‑150 (MQ=255)
                                                                                                              cGGGTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCt                                         >  2:3339935/1‑150 (MQ=255)
                                                                                                                    aactttttttAAGGCTAACCCCCTAAAAAAATTTCACCCTTCAGTTTAACTTGAGAACAGCGCGCGGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCAACt                                   <  1:5524532/147‑1 (MQ=255)
                                                                                                                     aaTTTTTTTAAGGCTAACCCCCAAAAAAAATTCCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACtt                                  <  2:2979213/150‑1 (MQ=255)
                                                                                                                      aTTTTTTTAAGGCTAACCCCCTAAAAAAATTTCACCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTc                                 <  2:4197544/150‑1 (MQ=255)
                                                                                                                       tttttttAAGGCTAACCCCTTAAAAAAATTTCATCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTcc                                <  1:5055129/150‑1 (MQ=255)
                                                                                                                         tttgtAAGGCTCACACTCTAAAAAAATTGCGGTCGTCAGTTTACCTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTc                              <  2:174985/150‑1 (MQ=255)
                                                                                                                          ttttAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCa                             <  2:2124035/150‑1 (MQ=255)
                                                                                                                            ttAAGCTTAACCTCTAAAAAAAATTCCACCTGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAgg                           <  1:4019109/150‑1 (MQ=255)
                                                                                                                                 gCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCaa                      >  2:5415472/1‑150 (MQ=255)
                                                                                                                                  cTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAAc                     >  1:3720444/1‑150 (MQ=255)
                                                                                                                                   tAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACa                    >  1:5806318/1‑150 (MQ=255)
                                                                                                                                    aaCCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAg                   >  2:1968171/1‑150 (MQ=255)
                                                                                                                                     aCCCACTAAAAAAATTTCATCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGt                  <  2:5094447/150‑1 (MQ=255)
                                                                                                                                      cccccTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTg                 >  1:1531209/1‑150 (MQ=255)
                                                                                                                                         cgtAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGAtt              >  1:3673818/3‑150 (MQ=255)
                                                                                                                                         ccTAAAAAAATTCCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGCCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGAtt              <  2:2256907/150‑1 (MQ=255)
                                                                                                                                           tAAAAAAATTTAAGCTGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTCCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGATTCt            <  1:4513014/150‑1 (MQ=255)
                                                                                                                                             aaaaatTTTCACCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGATTCTTg          <  1:4130403/150‑1 (MQ=255)
                                                                                                                                               aaaaTTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGATTCTTGCa        >  1:2357589/1‑150 (MQ=255)
                                                                                                                                                  aTTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGATTCTTGCAaca     >  2:4249701/1‑150 (MQ=255)
                                                                                                                                                  aTTTCACCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGATTCTTGCAaca     <  2:5291280/150‑1 (MQ=255)
                                                                                                                                                   tttCAACCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGATTCTTGCAacac    <  2:413521/150‑1 (MQ=255)
                                                                                                                                                    ttCATCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGATTCTTGCAACAcc   <  2:3586083/150‑1 (MQ=255)
                                                                                                                                                    ttCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGATTCTTGCAACAcc   >  1:5601793/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTCAATTCGACAACTTTTTATTCGATGACGTGCTCGGAAAGGCTTGTATGAAATCAGATAAGGTGTTGAAACGACAAGGTTGACAGCGCATTCAAAAATAATGTTAAACCCGGCTGAAATTTTTTTAAGGCTAACCCCCTAAAAAAATTTCAGCCGTCAGTTTAACTTGAGAACAGCGCGCCGGTCTCCGCCAACGCGCTGCCATTTTTGGAATGAATTAAAATTATTCACCAATAATCGTAAGTTTTCTTGTTTTTTCTGCGACTTCCTCAGGGTCAACAGTGATTCTTGCAACACCT  >  CP006881/2807531‑2807829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: