| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,153,598 | C→A | 7.8% | intergenic (‑412/+7) | U712_16190 ← / ← U712_16195 | Hypothetical Protein/putative xanthine dehydrogenase subunit E |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,153,598 | 0 | C | A | 7.8% | 765.0 / 7.1 | 321 | intergenic (‑412/+7) | U712_16190/U712_16195 | Hypothetical Protein/putative xanthine dehydrogenase subunit E |
| Reads supporting (aligned to +/- strand): ref base C (82/171); new base A (31/2); total (147/174) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.51e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 328 total aligned reads displayed.
ACGCCATAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTT > CP006881/3153449‑3153747 | aCGCCATAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTc < 2:1599020/150‑1 (MQ=255) cGCCATAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTcc < 2:4034332/150‑1 (MQ=255) cGCCATAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTCCGTCTTGATCGCGCTGTCTGAGTGAGGCTAAAAAAGTcc > 1:2441532/1‑150 (MQ=255) tccATAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCg < 1:4251034/149‑1 (MQ=255) gCCATAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGGGGCTAAAAAAGTCCg > 2:4068007/1‑150 (MQ=255) ccATAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGATATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCgg < 2:3334877/150‑1 (MQ=255) ccATAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCgg < 1:1782687/150‑1 (MQ=255) cATAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGc < 2:4915600/150‑1 (MQ=255) cATAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTACGGc > 1:4730537/1‑150 (MQ=255) aTAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCgggt > 1:5442971/1‑148 (MQ=255) agaagTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCtttt < 2:1775448/150‑1 (MQ=255) agaagTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCtttt < 1:3138683/150‑1 (MQ=255) agaagTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAATTCTACGAGATTTATCGTGTGTTTTTCCACAACCCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTGAGGGtttt > 1:2293712/1‑150 (MQ=255) aagTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTaa < 1:3439721/150‑1 (MQ=255) aTGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTTCGGCTTTTAAAAGCCGGa > 2:4309312/1‑150 (MQ=255) aTGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGa < 1:3764203/150‑1 (MQ=255) aTGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGa < 1:3290213/150‑1 (MQ=255) ggCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACt < 2:807325/150‑1 (MQ=255) gCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTc < 2:2806896/150‑1 (MQ=255) gTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTccc < 2:5758403/150‑1 (MQ=255) cTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTAGGGCTTTTATAAACCCGACTCCCGt > 1:866611/1‑150 (MQ=255) tttGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTc > 1:1103825/1‑150 (MQ=255) tGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTa > 2:3854042/1‑150 (MQ=255) gCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTACGGCTTTTAAAAGCCGGACTCCCGTCTAc > 2:2183382/1‑150 (MQ=255) cTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTTCGGCTTTTAAAAACAGTCATCCCCTCTAcc > 1:1930468/1‑150 (MQ=255) cTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAANAGCCGGACTCCCGTCTAcc > 2:5803421/1‑150 (MQ=255) tATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTNCGGCTTTTAAAAGCCGGACTCCCGTCTAccc > 2:3660728/1‑150 (MQ=255) aTGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTAcccc < 1:4146585/150‑1 (MQ=255) aTGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTAcccc < 1:4336219/150‑1 (MQ=255) gtgtTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCg > 2:1391823/1‑150 (MQ=255) gtgtTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTACGGGTTTTAAAAGCCGGACTCCCGTCTACCCCCg > 1:3735197/1‑150 (MQ=255) ttCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTc < 2:2758735/150‑1 (MQ=255) tCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCa > 2:2710487/1‑150 (MQ=255) tAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAActc > 1:5189427/1‑150 (MQ=255) aaTCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTGCCCTTAAACCCCGCTCAActct > 1:3706617/1‑150 (MQ=255) tCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGCGGCTAAAAAAGTACGGCATTTAAAACACAGAATCCCATATACCCCCCTTCAActttct > 1:2158982/1‑150 (MQ=255) tCTTTTTGTAATACAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTTTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGCACTCCCGTCTACCCCCGTTCAActctct < 1:5551387/150‑1 (MQ=255) tttGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTa > 2:3445369/1‑150 (MQ=255) ttGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCTTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCTGACTCCCGTCTACCCCCGTTCAACTCTCTTCTaa < 1:2635355/150‑1 (MQ=255) ttGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTACGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTaa > 2:4506811/1‑150 (MQ=255) aaTCCAGAACCTGTCAAGTTCTACGAGGTTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCCAACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCt < 1:5704207/150‑1 (MQ=255) aTCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTTCGGGTTTTAAAAGCCGGACCCCCCTCCAACCCCCTTCAAATCTCTTCTAATccct > 1:1388746/1‑148 (MQ=255) aTCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGAACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTg > 1:4952584/1‑150 (MQ=255) aTCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTACGGGTTTTTAAAGACCGAGTCCCCCCTAACCCCCGTCCACTCTCTTCTAATCCTg > 1:2885817/1‑150 (MQ=255) ccAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGGTTTTAAAAGCCGGACTCCCGTCTACCCCCCTTCACCTCTCTTCTAATCCTGct > 1:5321349/1‑149 (MQ=255) ccAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCa > 2:5106832/1‑150 (MQ=255) cAGAAGCTGTAATGTTCTACTACATTTTTCGTGTTTTTTCCCACATCGTTTCTGCGTCTTGATCGCGCTGTTTGTCTGAGTCTAAAAAAGTCCGGTTTTAAAAAGCCTAACTCCCGTTTACCCCCGTCCAACTCTCTTCTAATCCTGCaa < 2:1470829/150‑1 (MQ=255) aGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAACCGGACTCCCGTCTACCCCCGTTCAACACTTTTCTAATCCTGCAAg > 1:5100569/1‑150 (MQ=255) gAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTTCGGCTTTTAAAAGCCGGACTCCCGTCTTCCCCCGTTCAACTCTCTTCTAATCCTGCAAGc > 1:2220854/1‑150 (MQ=255) aGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTg > 1:1954075/1‑150 (MQ=255) ctctCAAGTTCTACGAGATTTATCGTTTGTTTTCCCACAACGCTCCTGCGTTTTGTTCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCTGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGAc < 1:5366582/147‑1 (MQ=255) cTGTCAAGTTCTACGAGATTTATCGTGTGTTTTTCCACATCGCTTCTGCGTCTTGATTGCGCTGTCTGACTGAGTCTAAAAAAGTCCGGCTTTTAAAAGCCGTACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGAc < 2:5290785/150‑1 (MQ=255) cTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCCTGCTGTCTGACTGAGAATAAAAAAGTCCCGCTTTTAAAAGCCGTACTCCCCTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGAc < 1:5615467/150‑1 (MQ=255) tGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGAcc < 2:2282161/150‑1 (MQ=255) tGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGAcc < 2:2042612/150‑1 (MQ=255) tCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTGCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑Gc > 2:1090934/1‑150 (MQ=255) aGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTGCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTTAACTCTCTTCTAATCCTGCAAGGTCACC‑GCATa > 2:1872259/1‑150 (MQ=255) aGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTGCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATa > 2:1531924/1‑150 (MQ=255) ttCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAAt > 2:5585756/1‑150 (MQ=255) cTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATcc < 2:4952584/150‑1 (MQ=255) cTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTACGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATcc > 1:3821951/1‑150 (MQ=255) aTTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACTCCCCTTCAACTCTCTTCTTATCCTCCAAACTGGCC‑GCATAATCCCGCCaat > 1:1666015/1‑148 (MQ=255) ttATTGTGTTTTTTCCCAAAACTCTTCAGGGTCTTGATCGCGTTGTCTGAGTGAGGCAAAAAAAGTCTGGCTTTAAAAAGCCGAACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATAcc < 1:4558542/150‑1 (MQ=255) ttATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATAcc < 2:4475656/150‑1 (MQ=255) tttttCCCACAACGTTTTTGCGTCTTGATAGCGTTGTATAATTGAGGTTAAAAAAATCCGGCTTTTAAAAGCCGTACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACAcc < 1:1027204/149‑1 (MQ=255) tttCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTTCGGCTTTTAAAAGCCGGACTCCCGTCTTCCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACCGGCAT‑ATCCCCCCATTCCCCGTACACCgg > 2:4702948/1‑150 (MQ=255) aaCGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCTAACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAAtt < 2:3746488/150‑1 (MQ=255) aCGCTTCTGCGCCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTc < 2:1567414/150‑1 (MQ=255) cGCTTCTGCGTCTTGATCGCGCTGTCTGCCTGAGGCTAAAAAAGCCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTcc < 2:3174426/150‑1 (MQ=255) cGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTcc < 2:12166/150‑1 (MQ=255) gCTCCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGTACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTccc < 2:4376475/150‑1 (MQ=255) ttCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTGCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCCCCATACCCGGTACACCGGCACAAAATccccc > 1:1227041/1‑149 (MQ=255) cTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAAATCCCCGcc > 1:206732/1‑150 (MQ=255) gtgTCTTGATCGCGCTGTCTGTCAGAGGCTAAAAACGTCGGGCTTTTAAAAGCCGAACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAg < 1:4466860/148‑1 (MQ=255) gCGTCTTGATCGCGCTGTTTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGCACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAg < 2:1352795/150‑1 (MQ=255) cGTCTGGACCGCGCGCTGTGACAGAGGCAAAAAAAGCCCGGTTTTTAAAACCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGc < 1:4651014/150‑1 (MQ=255) gTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTTAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GGATAATCCCGCCATACCCGGTACACCCGCACAAATTCCCCGCCAGcc > 2:762327/1‑150 (MQ=255) gTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGGCTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGcc > 2:1432403/1‑150 (MQ=255) tCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGccc < 2:4565445/150‑1 (MQ=255) ttGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCctt < 2:4594419/150‑1 (MQ=255) cgcgCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTtcttct < 2:3040533/150‑1 (MQ=255) cgcgCTGTCTGACTGAGGCAAAAAAACTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTtcttct < 2:2557652/150‑1 (MQ=255) cgcTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCtat < 2:5117342/150‑1 (MQ=255) cTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTatat < 2:1944703/150‑1 (MQ=255) tGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGAACTCCTGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATc < 2:2334474/150‑1 (MQ=255) ttCTGACTGAGGCTAAAAAAGTCTGGCTTTTAAAAGCCTGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCt < 1:3660728/149‑1 (MQ=255) agagtgaGACTAAAAAAGTGCGTCTTTTAAAAGCCAACCTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTg < 1:2123924/146‑1 (MQ=255) ctgaGGCTAAAAAAGTCCGGTTTTTAAAATCCGTACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCa < 2:1108966/150‑1 (MQ=255) ctgaGGCTAAAAAAGTACGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCAGCACAAAATCCCCGCCAGCCCTTCTTCTATATCTTTGTCa > 2:5697669/1‑150 (MQ=255) tgaGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAg < 1:3474622/150‑1 (MQ=255) gaGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGa < 2:5444333/150‑1 (MQ=255) ggCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAg < 2:2173098/150‑1 (MQ=255) gCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCCAGCTGACC‑GCATAATCCCGCCCTACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCaggagg > 2:3604056/1‑150 (MQ=255) gCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAgg > 1:5659019/1‑150 (MQ=255) acaaaGTCCGCCTTTTCAAACCCCAACTCCCGCCTACCCCCGTTCAACACTCTTCTAATCCTCCAAGCTGACC‑GCATCACCCCGCCATCCCCGGTACACCGGCACACATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGa < 2:62030/148‑1 (MQ=255) aaaGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAgg > 1:3574416/1‑150 (MQ=255) aaaGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAgg < 1:5843021/150‑1 (MQ=255) aaaGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAgg > 2:2428955/1‑150 (MQ=255) gTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGt > 2:3923651/1‑150 (MQ=255) ccGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGttt > 2:5232433/1‑150 (MQ=255) | ACGCCATAAGAAGTTTTTATGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCGTTCAACTCTCTTCTAATCCTGCAAGCTGACC‑GCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTT > CP006881/3153449‑3153747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |