| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 916,340 | C→A | 8.1% | intergenic (+12/+67) | U712_21235 → / ← U712_04455 | tRNA‑Leu/Sporulation‑control protein spo0M |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 916,340 | 0 | C | A | 8.1% | 742.3 / 15.7 | 283 | intergenic (+12/+67) | U712_21235/U712_04455 | tRNA‑Leu/Sporulation‑control protein spo0M |
| Reads supporting (aligned to +/- strand): ref base C (61/178); new base A (26/2); total (95/188) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.57e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 291 total aligned reads displayed.
ACTTTATGAGATCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCTTCAAGCTCTGATTGGCTGAAACGGA > CP006881/916191‑916489 | acTTTATGAGATCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAcc < 1:5595236/150‑1 (MQ=255) cTTTATGAGATCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAccc > 1:2126992/1‑150 (MQ=255) cTTTATGAGATCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAccc < 2:4961716/150‑1 (MQ=255) tttATGAGATCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCg < 1:640878/150‑1 (MQ=255) ttATGAGATCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGt < 1:183855/150‑1 (MQ=255) aTGAGATCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGttt > 2:2856875/1‑150 (MQ=255) tGAGATCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTc < 2:5321628/150‑1 (MQ=255) gagaTCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCt < 2:4113835/150‑1 (MQ=255) agaTCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCtt > 1:2334927/1‑150 (MQ=255) aTCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCGGTTTCTTaa > 2:3227120/1‑150 (MQ=255) aTCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAAGTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTaa < 1:977736/150‑1 (MQ=255) tCCATGATATATTTATATTCGTCGGCTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAAc < 1:3245903/150‑1 (MQ=255) gcATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGTCGGAATTGTGAGCCGCGCACGTCTCAAAATCGTGTTCCTTCTGGAGTGGCGGTCCGACCCCCACCACCGGTATACTGAAATACCCGTTTCTTAACa < 1:1343912/149‑1 (MQ=255) cATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAACCGTTTCTTAAAAg > 1:2699945/1‑150 (MQ=255) aTGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACGAGTTTCTTAACAG‑a > 1:3940307/1‑150 (MQ=255) aTGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACACGTTTCTTAACAG‑a > 2:787994/1‑150 (MQ=255) gATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑aaa < 2:4265769/150‑1 (MQ=255) atatatTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGGAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCTGTTTCTTAACAG‑AAAc < 1:3522780/150‑1 (MQ=255) atatttatattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACgg < 1:4871024/150‑1 (MQ=255) atttatattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGt < 1:4230551/150‑1 (MQ=255) atttatattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGt < 1:4655625/150‑1 (MQ=255) atttatattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGt < 2:4412484/150‑1 (MQ=255) ttatattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGttt < 2:600601/150‑1 (MQ=255) tatattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGtttt > 2:2287933/1‑150 (MQ=255) atattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGttttt < 2:2067402/150‑1 (MQ=255) attCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAACCGTTTCTTAACAG‑AAACGGGtttttat > 1:3098022/1‑150 (MQ=255) ttCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGtttttatt < 2:3646213/150‑1 (MQ=255) tcgtcgGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGtttttattt < 2:2974000/150‑1 (MQ=255) gtcgGTTAGATACGACGTAAAACTTGCCGGTGTGGGGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAATCTCGTTTCTTAACAG‑AAACGGGtttttattttt < 1:3065588/150‑1 (MQ=255) gtcgGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACACGTTTCTTAACAG‑AAACCGGtttttattttt > 2:2005405/1‑150 (MQ=255) tcgGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGtttttatttttt < 2:5686691/150‑1 (MQ=255) ggTTAGATACGACGTAATACTTGACGGTGTGGTGGAAATGGCAGACGCGCACGACTCAAAATCGTGGTCCTTCTGGAGTGTCGGTTCGACCTCGTCCACCGCTATACTGAAAAACCTGTTTCTTAACAG‑AAACGGGtttttattttttat < 1:1044829/150‑1 (MQ=255) ggTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGtttttattttttat < 2:4301276/150‑1 (MQ=255) ggTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGtttttattttttat < 2:5728686/150‑1 (MQ=255) ggTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACACGGTTCTTAAAAG‑AAAAGGGtttttatttttttt > 1:4569608/1‑148 (MQ=255) gTTAGGTACGATATAAAACTTGTCGGTCTGGCGGAATTGGCAGAACCGCACGACTCAAAATCGTGTTTCTTCTGGAGTGTCGGTTCGACCCCAACCACAGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGATttttattttttatt < 1:1521662/150‑1 (MQ=255) tAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTaa < 1:4278942/150‑1 (MQ=255) agatcggacgTAAAACTTGCCGGTGGGGCGGAGTTGGCAGCCGCCCACGACTCAAAATCGTGCTCCTTCTGGAGTGTCGGCTCGACCCCGACCACCGGTATCCTGACAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTaaa < 2:1649547/144‑1 (MQ=255) aGATATGACGTAAAACTTGCCGGTGTGGCGCAATTGGCAGACGCGCACGACACAAAACGGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGCGTTTTTATTTTTTATTaaa < 1:290572/150‑1 (MQ=255) gATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACATGTTTCTTAAAAG‑AAACGGGTTTTTATTTTTTTTTAAAg > 1:4066855/1‑150 (MQ=255) aTACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAAAAATTTTTTTTAAA‑AAAAAGGTATTTATTTTTTATTtaaaa > 1:1192764/1‑148 (MQ=255) tACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGaa < 2:1302057/150‑1 (MQ=255) tACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACACGTTTTTTTAAAGAAAAGGGGTTTTTTTTTTTTTTTaaaaa > 1:3156429/1‑148 (MQ=255) tACGACGTAAAACTTGCCGGTGTGCCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTTTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGaa < 1:1675234/150‑1 (MQ=255) acgacgTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGaaa < 2:4765920/150‑1 (MQ=255) acgacgTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGaaa < 1:5376437/150‑1 (MQ=255) gacgTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAg < 2:2602029/150‑1 (MQ=255) gacgTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAg < 2:5186306/150‑1 (MQ=255) acgTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTTACAA‑AAAACAGGTTTTATTTTTTATTTAaaaaaaag > 1:1772805/1‑148 (MQ=255) gTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAACAGTTTCTTTACAA‑AAAGCGGTTTTTATTTTTTTTTAAAAAAAAagag > 1:1997070/1‑150 (MQ=255) tAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGc < 1:2566990/150‑1 (MQ=255) aaaaCTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGcc < 1:2817510/150‑1 (MQ=255) aaaCTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCt < 1:333313/150‑1 (MQ=255) aaCTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTc < 2:5542388/150‑1 (MQ=255) aaCTTCCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTTCTTCTGCAGTGTCTGTTCCTCCCCGACCACCGGTATACTGAAAAACTCGTTTCTTAACAG‑AACCGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCtt < 1:566302/150‑2 (MQ=255) aCTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCg < 2:5263760/150‑1 (MQ=255) aCTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCg < 1:3992208/150‑1 (MQ=255) aCTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCg < 2:3471713/150‑1 (MQ=255) aCTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCg < 2:5469256/150‑1 (MQ=255) cGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCt < 1:3460790/150‑1 (MQ=255) cGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGACTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGCGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCt < 1:5047301/150‑1 (MQ=255) gtgGCGGATTTGGAAGCCCCTCAATACTCAATATTGTGTTTCTTCTGAAGTGTCGGTNNAACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCttttt < 1:793986/150‑1 (MQ=255) ttGGCATACGCCCACCACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAGCAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTAtacttact < 1:5327996/150‑1 (MQ=255) ttGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTAtacttact < 2:215424/150‑1 (MQ=255) ttGGCAGACGCGCACGACACAAAATCGTGTCCCTTCTGGAGTGTCGGGTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTAtacttact < 2:2433719/150‑1 (MQ=255) aGACGCGCACGACCCAAAATCGTGTTTCTTCTTGAGTGTCGGTTCGACCCCGTCCTCCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCg < 1:1715410/150‑1 (MQ=255) gACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGt < 2:3960198/150‑1 (MQ=255) cACGACACAAAATCCTGTTCCTTCTGGAGTCTAGGTTCAACCCCGACCATTGGTATATTAAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGt < 1:1372463/150‑1 (MQ=255) aaaTCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGAtct < 1:4018734/150‑1 (MQ=255) aaaTCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGAtct < 2:3739022/150‑1 (MQ=255) tCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCtctt < 2:1570268/150‑1 (MQ=255) ccTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCAc < 2:2699945/150‑1 (MQ=255) tCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACAAGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTTCTCAGCGTATTGGTCTAGGGTGTCTTCTTGCCCctc > 1:3032316/1‑150 (MQ=255) cTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTTTTTAAAAAAAGGAAGCTCGGCTCCTTTTTTTTCTTACTCTGCGTATTGTTGTTGGATGTTCTCTTGCACctct > 2:4697931/1‑150 (MQ=255) cTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACctct < 2:1276829/150‑1 (MQ=255) gtgtCGGTTCGACCCCGACCACCGGTATACTGAAAAAAACGTTTCTTAAAAG‑AAACGTGTTTTTATTTTTTATTAAAGAAAAGAAGCATTGGCTCCTTTTTATACTTACTTAACGTATTGGTCTATGATCTATTGTAGGAACTCTTCTAg > 1:3677859/1‑150 (MQ=255) tCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGctc < 2:3098020/150‑1 (MQ=255) cGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGctct < 2:5421101/150‑1 (MQ=255) cGGTTCGACCCCGACCACCGGTATACTGAAAAACACGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCATCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTATctct > 1:5462773/1‑150 (MQ=255) ggTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCtctt > 2:3806728/1‑150 (MQ=255) ggTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCtctt > 2:5196952/1‑150 (MQ=255) ggTTCGACCCAGCCCACCGGTATATTAAATAACCCGTTTCTTAACAT‑AAACGGGTTTTTATTTCGTAGTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCtctt < 1:2251419/150‑1 (MQ=255) tCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTTGCTCTTCTg > 1:2099065/1‑150 (MQ=255) cGACCCCGACCACCGGTATACTGAAAAACACGTTTCTTAACAG‑AAACGGGATTTTAATTTTTATTAAAGAAAAGGGGGCTCGCGTCCTTTTTATACTTACTCAAGGGATTTGTCTAAGGTTTCTTCTAGCACCCCTTCTCGCTCTTCTGt > 1:997369/1‑150 (MQ=255) gACCCCGACCACCGGTATACTGGAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTa > 1:3394467/1‑150 (MQ=255) gACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGtt > 1:5078555/1‑149 (MQ=255) cccGACCACCGGTATACTGAAAAAGACGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCTGCTCCTTTTTATACTTACGCAAAGTATTTGTCTAGGGTCTCTTTTTGCACCTCTTCTATGTCTTCTGTATCt > 1:4398672/1‑150 (MQ=255) cccGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCt < 2:1318759/150‑1 (MQ=255) cGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTTGTCTAGGATCTCTTCTTGCACCTTTTCTAGCTCTTTTGTATCTTc > 1:433874/1‑150 (MQ=255) cGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATAATTACTCAGCGGATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCTTc > 1:2978709/1‑150 (MQ=255) ccaccGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAATGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCTTCAAg < 2:950650/150‑1 (MQ=255) cGGTATACTGAAAAACCCGTTTCTTAACAG‑AATCGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCTTCAAGctct < 2:3575292/150‑1 (MQ=255) cGGTANACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCTTCAAActct > 1:5807571/1‑150 (MQ=255) gTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTTTTAAAGAAAAGGGGCCTCGGCTCCTTTTTTTACTTTCTCAGCGTATTGGTCTAGGGTCTCTTTTTGCACCTCTTTTATCTCTTCTGTTTTTTCTAGCTCTgt > 2:4638313/1‑149 (MQ=255) gTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATTCTTACTTAGCGTATTGGTCTAGGATCTCTTCTTGCAACTCTTCTTGCTCTTCTGTATCTTCAAGCTCTGa > 1:1943805/1‑150 (MQ=255) tataCTGAAAAACCTGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCACCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCTTTAAGCTCTGAt > 1:728511/1‑150 (MQ=255) aCTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCTTCAAGCTCTGATTgg < 2:1468330/150‑1 (MQ=255) tGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCTTCAAGCTCTGATTGGCt < 2:4709918/150‑1 (MQ=255) gAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCTTCAAGCTCTGATTGGCTg < 2:5050188/150‑1 (MQ=255) aaCCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCTTCAAGCTCTGATTGGCTGAAAc > 1:4175913/1‑150 (MQ=255) | ACTTTATGAGATCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAACCCGTTTCTTAACAG‑AAACGGGTTTTTATTTTTTATTAAAGAAAAGGAGCCTCGGCTCCTTTTTATACTTACTCAGCGTATTGGTCTAGGATCTCTTCTAGCACCTCTTCTAGCTCTTCTGTATCTTCAAGCTCTGATTGGCTGAAACGGA > CP006881/916191‑916489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |