Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP006881 | 3,725,237 | A→G | intergenic (‑69/‑460) | U712_19205 ← / → U712_19210 | Uncharacterized protein ywcI/Minor extracellular protease vpr |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP006881 | 3,725,237 | 0 | A | G | 99.5% | 1289.0 / NA | 366 | intergenic (‑69/‑460) | U712_19205/U712_19210 | Uncharacterized protein ywcI/Minor extracellular protease vpr |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (168/196); minor base C (0/2); total (168/198) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.02e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 366 total aligned reads displayed.
TTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑C‑TTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCACGGGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAGTTTTGTTGAAAGCT > CP006881/3725097‑3725380 | tttCTGTCCGGCGCCCCCCAGTTCATCAAAAAGACCATCCCCACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTCCTCAGCCGCAGCCCGCAAGAAAAg < 1:1604922/150‑1 (MQ=255) tgcTGTCGGGCGCCCCCCAGTTCATCAAACACACCATCCACACCCGTGAGGATCCAAGCCAACGTGTCATAGAGAGACAGCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGa < 2:3847702/148‑1 (MQ=255) tGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGCTTTCTCAGCCGCAGGCCGCAAGAAAAGACgg > 1:3058112/1‑150 (MQ=255) gTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGc > 2:39088/1‑150 (MQ=255) gTCCGGCGTCACCCAGTCCACCAAAAAGACCATCCACCCCCGTATAGATACAAGCAAACGTTTCTTAGAAAACCATCCCTCCCCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGc < 2:3588867/150‑1 (MQ=255) tCCGGCGTCACCCAGTTCAACAAAAAGACCACCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGcc < 2:528826/150‑1 (MQ=255) ccGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCg > 1:1832992/1‑150 (MQ=255) cGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGa < 1:749968/150‑1 (MQ=255) aCCCAGCTCATCAAAAAGCCCATCCACACCCGTAAAGATACAGGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGAtttcttt < 2:1007401/150‑1 (MQ=255) cAGTCCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGAtttcttttct < 2:2132833/150‑1 (MQ=255) aGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTtctc < 1:3372843/150‑1 (MQ=255) aGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTtctc > 2:2259883/1‑150 (MQ=255) gTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCg < 1:2845032/150‑1 (MQ=255) ttCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGc > 2:3022551/1‑150 (MQ=255) tcatcaAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCa < 1:2449526/150‑1 (MQ=255) atcaAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCCAGAAAAGACGGCCGATTTCTTTTCTCGCaaa > 2:955736/1‑150 (MQ=255) atcaAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCaaa < 2:1370670/150‑1 (MQ=255) tcaAAAAGACCATCCACCCCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAAc < 2:2781186/150‑1 (MQ=255) tcaAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAAc < 2:1728775/150‑1 (MQ=255) caAAAAGACCATCCACCCCGGAAAAGATACAAGCAAACTTTTCTTAGAAAAACATCCCTCCGCTACTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTCTACTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACt < 2:1610445/150‑1 (MQ=255) aaaaGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAg < 2:3481720/150‑1 (MQ=255) aaaGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGGTTTCCTTTCTCGCAAACTAGc > 1:319230/1‑150 (MQ=255) aaaGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGc < 1:957849/150‑1 (MQ=255) aGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTCCTCGCAAACTAGCgg > 2:1997291/1‑150 (MQ=255) gACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCTGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCGGATTTCTTTTCTCGCAAACTAGCGGc > 1:1163940/1‑150 (MQ=255) aTCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTa > 2:231702/1‑150 (MQ=255) cacaCCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCa < 1:1576132/150‑1 (MQ=255) acacCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCaa > 1:1710856/1‑150 (MQ=255) cacCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCaaa > 2:1453973/1‑150 (MQ=255) cacCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCaaa > 2:2908318/1‑150 (MQ=255) acCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCaaaa > 2:434946/1‑150 (MQ=255) gTAAAGATCCAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCa < 1:93216/150‑1 (MQ=255) gTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCa > 2:2503480/1‑150 (MQ=255) aaaGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATg < 1:2503480/150‑1 (MQ=255) aaaGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATg < 1:3660884/150‑1 (MQ=255) aaaGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTACTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATg > 2:3714639/1‑150 (MQ=255) aGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGGCGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGAc > 1:100601/1‑150 (MQ=255) gATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCTGGCAG‑C‑CTTTT‑TAGCAGCCCGGTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGGTCTCTTTTCTCCCACACTAGCGGCCCCGGCAAAACCCATGAct > 1:2618360/1‑150 (MQ=255) tACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCTGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAGGAAAAAACGGCCGACTTCTTTTCTCCCAAACTAGCGGCCCTAGCAAAACTCATGActct > 1:2095385/1‑150 (MQ=255) tACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCCCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTTCCAAAACTCATGActct > 1:3121885/1‑150 (MQ=255) ccAAGCAAACGTTTCATAGAAAACCATCCCTCCCCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGGTTTCTCAGCCGCAGCCCGCGAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTa < 2:3391865/149‑1 (MQ=255) gCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGGAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGGCTCTATGAt > 1:502209/1‑150 (MQ=255) cAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATa > 2:640328/1‑150 (MQ=255) aaCGTTTCATAGCAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGa < 1:2249432/150‑1 (MQ=255) aCGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGAc > 2:2392310/1‑150 (MQ=255) cGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGAcc < 1:1379336/150‑1 (MQ=255) cGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGAcc < 2:48612/150‑1 (MQ=255) gTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCg < 2:1120933/150‑1 (MQ=255) tCATAGAAATACAACCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TCGCAGCCCGTTTTCCCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTgg < 2:192875/150‑1 (MQ=255) aTAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGaa < 1:851768/150‑1 (MQ=255) tAGAGAAGCATCCCTCCGCTTCGTCTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGaaa < 2:3314605/150‑1 (MQ=255) aGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCCAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAag > 1:1211818/1‑150 (MQ=255) aaaaCATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAgaga > 1:1993212/1‑150 (MQ=255) aTCCCTCCGCTTCTTTTGGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCt < 2:1559155/150‑1 (MQ=255) cccTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGGTAGACCGTGGAAAGAGAATTCttt > 2:2553356/1‑150 (MQ=255) cTCCGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAACCTAGCGGCTCTAGCAAAACCCATGACCCTATGATAGACCGTGGAAAGAGAATTCTTTGt < 2:3644050/150‑1 (MQ=255) ccGCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTca < 2:1956899/150‑1 (MQ=255) gCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTcaca > 2:1657889/1‑150 (MQ=255) gCTTCTTTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTcaca < 2:2435101/150‑1 (MQ=255) tcttTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGGTAGACCGTGGAAAGAGAATTCTTTGTCACaaac > 1:2476201/1‑148 (MQ=255) cttTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGGAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAAGTCTTTGGCACaacaa > 1:1669344/1‑147 (MQ=255) cttTTTGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCCCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAatat < 2:3454865/150‑1 (MQ=255) tttttGGCAGGCAGCC‑C‑TTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATg < 2:753948/150‑1 (MQ=255) ttGGCAGGCAG‑CTT‑TTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGGAAGAGAATTCTTTGTCACAATAGGAgg > 1:1306426/1‑149 (MQ=255) tGGCAGGCAG‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGAAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTg < 1:626489/150‑1 (MQ=255) ggcaggcaG‑C‑C‑TTTCTAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGTTTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACCCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGa > 1:2164333/1‑150 (MQ=255) gcaggcag‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGaa > 2:14221/1‑150 (MQ=255) aggcag‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGaaaa > 2:2086950/1‑150 (MQ=255) aggcag‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGaaaa < 2:247719/150‑1 (MQ=255) cag‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAGAAc > 1:2215232/1‑150 (MQ=255) cag‑C‑CTTTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAAc < 1:788009/150‑1 (MQ=255) agtctttt‑tAGCAGCCCGTTCTCCCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAAcc < 1:3152027/145‑1 (MQ=255) gcctttt‑tAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGGGAAAAAACCa > 1:1518366/5‑150 (MQ=255) cctttt‑tAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCaa < 1:1390383/147‑1 (MQ=255) cctttt‑tAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCCATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCaa > 1:3587574/4‑150 (MQ=255) cctttt‑tAGCAGCCCGTTTCCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCACTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCaa < 1:2315846/147‑1 (MQ=255) ctttt‑tAGCAGCCCGTTTTCGCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCCAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAAc < 1:1083987/148‑1 (MQ=255) ttt‑tAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTa > 2:1078407/1‑150 (MQ=255) ttt‑tAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTa > 1:3715509/1‑150 (MQ=255) tt‑tAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAg < 2:1753882/150‑1 (MQ=255) t‑tAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGt < 2:3120555/150‑1 (MQ=255) t‑tAGCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCCCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGt < 1:2937926/150‑1 (MQ=255) t‑tAGCAGCCCGTTTTCCCAGCCGCCGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGt < 1:3883100/150‑1 (MQ=255) t‑tAGCAGCCCGTTTCCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGt < 2:1860909/150‑1 (MQ=255) tAGCAGCCCGTTTTCCCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGGAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGtt < 2:2614587/150‑1 (MQ=255) tAGCAGCCCGTTTTCCCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGtt < 2:884345/150‑1 (MQ=255) gcagcCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGGAAGGGGATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGtttt > 1:147867/1‑150 (MQ=255) cagcCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAAATCTTTGTCACAATATGAGTGAAAAAACCAACTAGttttt > 1:409037/1‑150 (MQ=255) caccccGTTTTCCCAGCCGCAGCCCCCAAGAAAAGACGGCCGATTTCTTTTCACGCAACCTAGCGGCTCTAGCAAAACCCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGttttt < 2:2182210/147‑1 (MQ=255) agcCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAACGGAATTCTTTGTCACAATATGAGTGGAAAAACCAACTAGTTTTTa > 1:54018/1‑150 (MQ=255) cGTTTTCTCAGCCGCAGCCCGCAAGAAAAGCCGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAg < 1:2051631/150‑1 (MQ=255) gTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAGt < 1:2738128/150‑1 (MQ=255) tcAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAGTTttgtt < 2:1788469/150‑1 (MQ=255) cagccccagcccGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAGTTttgttg < 1:2553356/150‑1 (MQ=255) aGCCGCAGCCCGCAAGAAAAGACGGCGGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAGTTTTGTTGa < 1:3816491/150‑1 (MQ=255) aGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAGTTTTGTTGa < 1:3022551/150‑1 (MQ=255) ccGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAGACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTCGCCACAATATGAATGAGAAAACCAACTAGTTTTTAGAAGGTTTGTTGaaa > 1:3314575/1‑150 (MQ=255) ccGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGGATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAGTTTTGTTGaaa > 1:1439321/1‑150 (MQ=255) ccGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTGTTTAGAAGGTTTGTTGaaa > 1:1926471/1‑150 (MQ=255) cGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAGGTTTGTTGAAAg > 2:3146374/1‑150 (MQ=255) | TTTTCTGTCCGGCGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAG‑C‑C‑TTT‑TAGCAGCCCGTTTTCTCAGCCGCAGCCCACGGGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAGTTTTGTTGAAAGCT > CP006881/3725097‑3725380 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |