| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP006881 | 3304613 = | 0 (0.000) | 235 (0.040) +ACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAG |
122/178 | NT | 97.9% | intergenic (+1/+48) | U712_16995/U712_17000 | Arabinose metabolism transcriptional repressor/Uncharacterized protein yvbT |
| ? | pSIJ663_pHT315_araE_xy | 9781 = | 16 (0.000) | intergenic (+5050/–) | ampR/– | –/– | |||||
Only 100 of 502 total aligned reads displayed.
CGACACAGGCTGACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP006881/3304761‑3304613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGG > pSIJ663_pHT315_araE_xy/9781‑9928 |||||||||||||||||||||||||||||||||||||||||||||||||| GACACAGGCTGACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTATTTAC < 2:4256668/150‑1 AGGCTGACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGGTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGT > 2:5716427/1‑150 GCTGACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCA < 1:1681173/150‑1 ACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATAC < 1:4495512/150‑1 CGACATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCAGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACA < 2:2125195/150‑1 CGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACA > 2:3759013/1‑150 CGAAATTATGCTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACA > 1:5540314/1‑150 GAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACAC > 2:1288817/1‑150 GAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACAC > 1:4858517/1‑150 AATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGT > 1:4522090/1‑150 ATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGAGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGAC > 1:587623/1‑150 GTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACT > 2:2629315/1‑150 AACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGGGGGGAGACCCATACATTGCTTTTTACTGCGACAATACACGTTGACACTCTTTTGAAAGT < 1:2739485/150‑1 CTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTG > 1:4262753/1‑150 TTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGT > 1:5019221/1‑150 TTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTT > 2:3393597/1‑150 ACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTA < 2:1423577/150‑1 AGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAG > 2:4607784/1‑150 ACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTG < 1:2123981/150‑1 CAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGA > 1:2626197/1‑150 AGAATGCGTTCGATAGAAATCAGCGCTGACGTTTGGAAAAACAGATAACAGCTATAACAAAAGCAATGTAGCGGAGAGAGCAATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGAC < 1:2970567/150‑1 TGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGA > 2:2869230/1‑150 GCGTTCGTTTGAAATCATCGCTGACGTTTGAAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAA > 1:415640/1‑150 GTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAG < 2:5000615/150‑1 TCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGA < 1:1876451/150‑1 GTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAG < 2:3897000/150‑1 GTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTATGTTAAATTATCAGTGACATGAAAGGAAG > 2:3295397/1‑150 GAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGAATT > 2:5375632/1‑150 TCATCGTTGACTTTTTGATAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCATTACACGTTGACACTCTTTTGAAACTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAA < 1:3995599/150‑1 CATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAA < 2:1866136/150‑1 CATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAA > 2:4906375/1‑150 ATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAA < 1:1357589/150‑1 CGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATG < 1:2340338/150‑1 CTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAA < 1:3059947/150‑1 TGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG > 1:2526054/1‑150 CGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAAT > 2:279033/1‑150 TTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAATGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATAC > 1:4045977/1‑150 TTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACT > 2:5819060/1‑150 TTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACT < 1:3847351/150‑1 TGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTC > 2:4768380/1‑150 CAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGTGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAA > 1:4647782/1‑150 AGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAAT > 2:4507133/1‑150 AGATAAAAGCTATAAAAAAAGCAATGAAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAAT > 2:5113690/1‑150 GATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATT < 1:4139556/150‑1 AACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGA > 2:3619430/1‑150 AACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGA > 1:1439938/1‑150 CAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAAC < 1:1288817/150‑1 AGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACC > 1:101092/1‑150 aaAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAAT < 1:2201877/148‑1 AAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGTCACTCTTTTGAAAGTGTGTTAAATTATCAGTGAGATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCC > 1:4594223/1‑150 AAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCC > 2:63456/1‑150 AAAGCAATGTAGCGGGGACACCCATGCATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCT < 1:268811/150‑1 AGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGT > 1:666532/1‑150 GCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTA > 2:5447795/1‑150 TGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAA > 2:2197906/1‑150 GTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAG > 2:1990174/1‑150 GCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAG < 1:2430451/150‑1 GGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCC > 1:1111060/1‑150 GGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCAT < 2:415638/150‑1 GACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCA > 1:1044579/1‑150 GACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCA > 1:3403144/1‑150 GACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGC > 2:5656658/1‑144 ACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAA > 1:3944814/1‑150 ACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAA < 1:5447795/150‑1 CCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATG > 1:3365614/1‑150 CATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGG < 2:1739449/150‑1 cattttTTTTTACTGCGTAAATACACTTTGACACTCTTTTGAAAGTGTGTTAAATTANNAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATT < 1:781241/144‑1 CATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGGAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACCAGAAGCCATTCAATGGGATT > 2:2278861/1‑150 TTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTG < 1:2869230/150‑1 CTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCA > 2:3999009/1‑150 TTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATT < 2:5185236/150‑1 CTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAT > 2:1517237/1‑150 GCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCT > 1:3274986/1‑150 GTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCA < 1:5716427/150‑1 GTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCA > 2:1687140/1‑150 AATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGT > 1:5792642/1‑150 AATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGT < 2:163779/150‑1 CACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGG > 1:4939251/1‑150 CGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCG < 2:4119055/150‑1 GTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGG > 2:2729178/1‑150 CACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTT < 1:1636483/150‑1 CACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTT > 1:1215922/1‑150 ACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTG < 1:4722405/150‑1 ACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTG > 2:4401654/1‑150 CTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGG > 2:1192613/1‑150 CTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGG < 1:3724839/150‑1 TGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTT < 2:5265427/150‑1 TGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTT < 1:5175880/150‑1 AAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATT > 1:2001053/1‑150 AGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTG > 2:770719/1‑150 GTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGT > 2:3080459/1‑150 TGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTA < 2:1782329/150‑1 AAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTA > 1:3535957/1‑150 TTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCGAGCTCAAGTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGGCATTTTGGTCTCATGTGCGGCGGGGCTTGGCGGGTTATTGAATGGCTATGA > 2:856751/1‑150 TTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGGGGGGCTTGGCGGCTTATTGTATGGCTATGA > 1:5494586/1‑150 TCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACAC < 1:981640/150‑1 TCAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACAC < 2:2547421/150‑1 CAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACG < 1:1744513/150‑1 CAGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACG < 1:1727158/150‑1 AGTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGG > 2:2411288/1‑150 |||||||||||||||||||||||||||||||||||||||||||||||||| CGACACAGGCTGACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP006881/3304761‑3304613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGG > pSIJ663_pHT315_araE_xy/9781‑9928 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |