| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,663,209 | G→T | 9.0% | intergenic (+11/‑11) | U712_08550 → / → U712_08555 | FlaA locus uncharacterized protein ylxG/Flagellar basal‑body rod protein flgG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,663,209 | 0 | G | T | 9.0% | 1170.2 / 84.6 | 351 | intergenic (+11/‑11) | U712_08550/U712_08555 | FlaA locus uncharacterized protein ylxG/Flagellar basal‑body rod protein flgG |
| Reads supporting (aligned to +/- strand): ref base G (164/148); new base T (18/13); total (189/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.69e-01 | |||||||||||
Only 100 of 362 total aligned reads displayed.
TGATGGTAAAAGTGCAACAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTAAAGATATGGTAAGCC > CP006881/1663060‑1663358 | tGATGGTAAAAGTGCAACAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTggg > 2:4745576/1‑150 (MQ=255) ggTAAAAGTGCAACAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGaa > 1:3866833/1‑150 (MQ=255) gTAAAAGTGCAACAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAat > 1:3345270/1‑150 (MQ=255) gTAAAAGTGCAACAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAat < 1:1216666/150‑1 (MQ=255) aaaGTGCAACAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAatata > 2:495970/1‑150 (MQ=255) aaGTGCAACAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAatatat < 1:2536587/150‑1 (MQ=255) aGTGCAACAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATAtatt < 2:29677/150‑1 (MQ=255) cAACAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGt < 2:5709364/150‑1 (MQ=255) aCAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACGGACATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTa < 1:4340680/150‑1 (MQ=255) cAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTAc < 2:182533/150‑1 (MQ=255) aTAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGtt < 2:5131402/150‑1 (MQ=255) aCAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACtt < 2:4198668/150‑1 (MQ=255) cAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACttt < 1:2001770/150‑1 (MQ=255) ggCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGTGGAATATATTATGTTACGTTCACTTTAt < 2:472232/150‑1 (MQ=255) gCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGTGGAATATATTATGTTACGTTCACTTTAtt < 2:2761678/150‑1 (MQ=255) acaGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCt < 1:5835607/150‑1 (MQ=255) acaGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCt > 1:4039655/1‑150 (MQ=255) caGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTg < 2:56089/150‑1 (MQ=255) aGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTgg < 1:1800058/150‑1 (MQ=255) aGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTgg > 1:4722098/1‑150 (MQ=255) tAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGaa < 2:5063365/150‑1 (MQ=255) tAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGaa < 1:4494100/150‑1 (MQ=255) tAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGaa > 1:2077912/1‑150 (MQ=255) aaGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTGCTGCGAATGCCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAAt < 2:2016985/150‑1 (MQ=255) aaGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAAt > 2:3474042/1‑150 (MQ=255) aaGCTCTGTTAAACATTTTAAAGGAAATCATCATCTCGTTCTTGATGATCGGACCGAGATCAGTCGTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGCGGAATATACTATGTTACGTTCACTTTATCCTGGAAt < 2:865157/150‑1 (MQ=255) aGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATc < 1:282385/150‑1 (MQ=255) tctGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGTGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGc < 1:3524036/150‑1 (MQ=255) tctGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGc < 1:1011909/150‑1 (MQ=255) gTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGt > 2:7568/1‑150 (MQ=255) aaaCATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATg > 2:3346795/1‑150 (MQ=255) aaCATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGa > 2:3275015/1‑150 (MQ=255) ttttAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGTGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGaaaaa < 2:2849643/150‑1 (MQ=255) tAAATGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACtt > 1:2326926/1‑150 (MQ=255) aaaGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGACCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGATATGAAAAACttt > 1:3127122/1‑150 (MQ=255) aaGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTc < 1:4666176/150‑1 (MQ=255) aGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTca > 2:4424420/1‑150 (MQ=255) aGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTca > 2:4270391/1‑150 (MQ=255) ggAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTcaa > 1:4095352/1‑150 (MQ=255) gAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTcaaa > 1:4196467/1‑150 (MQ=255) aaaTTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTcaaac > 2:646315/1‑150 (MQ=255) aaaTTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTcaaac > 2:2892635/1‑150 (MQ=255) aaTTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATGTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATGATGGAATCAGCGGAATGAAAAACTTTcaaaca > 1:575846/1‑150 (MQ=255) aaTTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTcaaaca < 1:3491147/150‑1 (MQ=255) tattatCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAg < 2:2165534/150‑1 (MQ=255) atCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTg > 2:4601685/1‑150 (MQ=255) ctcGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGAc > 1:2702356/1‑150 (MQ=255) ctcGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGAc < 2:5322992/150‑1 (MQ=255) cGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGt > 1:4948932/1‑150 (MQ=255) gTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGTGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTa > 1:5177742/1‑150 (MQ=255) ttCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTaa > 2:4842327/1‑150 (MQ=255) ttCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGAACAATCATCTAAATAAAAACATCTGGGAGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGAATGAAAAACTTTCAGACAAAGCTTGGCGTaa > 2:2107318/1‑150 (MQ=255) ttGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCg > 2:1222571/1‑150 (MQ=255) atgGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGGAAAACTTTCAAACAAAGCTTGACGTAATCGGTaaca > 1:922227/1‑150 (MQ=255) atgGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTaaca > 2:4033130/1‑150 (MQ=255) atgGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGATaaca > 1:5237125/1‑150 (MQ=255) tgGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTaacaa < 1:1151368/150‑1 (MQ=255) gagaTCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGcc > 2:1601571/1‑150 (MQ=255) gagaTCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGcc < 1:4776026/150‑1 (MQ=255) gagaTCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGcc > 2:5399978/1‑150 (MQ=255) aTCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAAc < 2:1574617/150‑1 (MQ=255) tCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACg < 1:1583847/150‑1 (MQ=255) tCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTaaa < 2:3848744/150‑1 (MQ=255) ccTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAAt < 1:646315/150‑1 (MQ=255) cTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATa < 2:3215703/150‑1 (MQ=255) tGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATAc > 1:5053819/1‑150 (MQ=255) aaTGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGAGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTa > 1:4701976/1‑150 (MQ=255) gtcatgtcTGTGGGACAATCATCTAAATAAAAACATCTGGTGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGa > 1:3689375/1‑150 (MQ=255) tcatgtcTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGAt < 1:1863042/150‑1 (MQ=255) catgtcTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGAtt > 1:3772463/1‑150 (MQ=255) atgtcTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTc > 2:3412860/1‑150 (MQ=255) cTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCTCTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCaaaa < 1:5480305/150‑1 (MQ=255) tgGGACAATCATCTAAATAAAAACATCTGGTGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAaga < 2:5780890/150‑1 (MQ=255) gggACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGCTATGAAAAACTTTGAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAagag > 1:3720222/1‑150 (MQ=255) ggACAATCATCTAAATAAAAACATCTGGTGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGc > 1:3972503/1‑150 (MQ=255) ggACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGc < 2:3661589/150‑1 (MQ=255) ggACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGc < 2:3167653/150‑1 (MQ=255) aCAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCg < 1:316669/150‑1 (MQ=255) aaTCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCgtg < 2:4948932/150‑1 (MQ=255) atcTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGAc > 1:1453741/1‑150 (MQ=255) atcTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGAc > 2:223185/1‑150 (MQ=255) atcTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGAc > 2:2396307/1‑150 (MQ=255) atcTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGAc > 1:2109369/1‑150 (MQ=255) atcTAAATAAAAACATCTGGCGAAATATATTATGTTACGTTCACTTTATTCTGATATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCCGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAGGAGCCGTGTGAc > 1:5379695/1‑150 (MQ=255) tcTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGAcc > 2:5202833/1‑150 (MQ=255) cTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTAACCt > 2:5835815/1‑150 (MQ=255) ataaaAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTaa < 2:1781026/150‑1 (MQ=255) ataaaAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTaa > 2:3047290/1‑150 (MQ=255) ataaaAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTaa > 1:4840561/1‑150 (MQ=255) ataaaAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTaa > 2:548445/1‑150 (MQ=255) ataaaAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGAGTGACCTTTaa > 1:2199296/1‑150 (MQ=255) ataaaAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGAAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTAAAAAAGAACCGTGTGACATTTaa > 2:1063442/1‑150 (MQ=255) taaaAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTaaa < 2:5571496/150‑1 (MQ=255) aaaaCATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTAAAGa > 1:2401190/1‑150 (MQ=255) aaaaCATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTAAAGa > 1:1314415/1‑150 (MQ=255) aTCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTAAAGATATgg > 1:5548777/1‑150 (MQ=255) cTGGGGGATTATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTAAAGATATGGTa > 1:2952067/1‑150 (MQ=255) cTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTAAAGATATGATa > 1:168260/1‑150 (MQ=255) tGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTAAAGATATGGTaa < 2:2575129/150‑1 (MQ=255) gggggAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTAAAGATATGGTAAg > 2:4490615/1‑150 (MQ=255) | TGATGGTAAAAGTGCAACAGATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCTAAATAAAAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGATTCAAAAAGAGCCGTGTGACCTTTAAAGATATGGTAAGCC > CP006881/1663060‑1663358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |