| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,256,420 | T→C | 8.4% | T434T (ACA→ACG) | U712_11370 ← | Stage V sporulation protein AF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,256,420 | 0 | T | C | 8.4% | 933.7 / 66.3 | 322 | T434T (ACA→ACG) | U712_11370 | Stage V sporulation protein AF |
| Reads supporting (aligned to +/- strand): ref base T (129/166); new base C (11/16); total (140/182) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 329 total aligned reads displayed.
TTGGGGTGAACGATGCTGGGTCTTACTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACAGAATCACCTCAGG > CP006881/2256271‑2256569 | cGATGCTGGGTCTTACTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGGAATAATTAGCACTGTAAATCCGa > 1:1217300/1‑150 (MQ=255) tGCTGGGTCTTACTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGa < 2:4743882/150‑1 (MQ=255) gggTCTTACTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAg < 2:5371468/150‑1 (MQ=255) gggTCTTACTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAg < 1:2812497/150‑1 (MQ=255) gggTCTTACTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACCGTAAATCCGATGACGAg < 2:4252926/150‑1 (MQ=255) cTTACTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCt < 2:4316932/150‑1 (MQ=255) ttACTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCtt < 2:2653081/150‑1 (MQ=255) tACTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACCGTAAATCCGATGACGAGCCCttt < 1:4518782/150‑1 (MQ=255) cTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTta < 2:3732876/150‑1 (MQ=255) cTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTta < 1:3584709/150‑1 (MQ=255) ttttGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTCTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTtat < 2:1845642/150‑1 (MQ=255) ttGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTatat < 2:2999104/150‑1 (MQ=255) tGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATg > 2:741338/1‑150 (MQ=255) ccAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAAt < 1:1527303/150‑1 (MQ=255) cAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATa < 2:2866140/150‑1 (MQ=255) ggTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATaaa < 2:2961600/150‑1 (MQ=255) ggTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATaaa < 2:1557936/150‑1 (MQ=255) gTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAg < 2:5435444/150‑1 (MQ=255) tttCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGc < 2:3460828/150‑1 (MQ=255) ttCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACCGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCa < 2:3099450/150‑1 (MQ=255) gCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACg < 2:5065327/150‑1 (MQ=255) cTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGa > 1:2555156/1‑150 (MQ=255) tgtgCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAg < 2:591946/150‑1 (MQ=255) tgtgCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAg > 1:2453777/1‑150 (MQ=255) tgtgCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAg > 1:742905/1‑150 (MQ=255) gtgCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGt > 1:3065764/1‑150 (MQ=255) gtgCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGt > 2:1982565/1‑150 (MQ=255) gCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTAt < 2:2206143/150‑1 (MQ=255) ggACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCa > 2:2045567/1‑150 (MQ=255) gACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCAt > 2:2779158/1‑150 (MQ=255) aaGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAg > 1:2148839/1‑150 (MQ=255) aGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAgg < 1:3456446/150‑1 (MQ=255) gAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGa > 1:102452/1‑150 (MQ=255) aCCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACa > 1:4202188/1‑150 (MQ=255) cTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAg > 1:1123366/1‑150 (MQ=255) tGCCACAGCCCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGa < 1:2040595/150‑1 (MQ=255) gCCACAGCGCCTTTTCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCTATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGAc < 2:1240965/150‑1 (MQ=255) ccACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACg < 2:4655196/150‑1 (MQ=255) cacaGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACgg > 1:325436/1‑150 (MQ=255) aGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTc > 1:5296692/1‑150 (MQ=255) gcgcCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCa < 2:3766373/150‑1 (MQ=255) cgcCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCAt < 2:4278618/150‑1 (MQ=255) gcCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGGGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCAtt > 2:1102569/1‑150 (MQ=255) ccTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCAttt < 2:3907919/150‑1 (MQ=255) ccTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCAttt < 1:952519/150‑1 (MQ=255) tttCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATtttg < 1:5245713/150‑1 (MQ=255) tttCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGCCAATAATTAGCACTGTAAATCCGAGGCCGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATtttg < 2:800991/150‑1 (MQ=255) tCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATtttgtt > 1:66413/1‑150 (MQ=255) gTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGc > 1:4380145/1‑150 (MQ=255) gTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGc > 1:5219150/1‑150 (MQ=255) aaaGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCaa > 2:2535886/1‑150 (MQ=255) gggAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTCTATATGAAATAAAGCAACGAGTAGCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCt < 1:984778/150‑1 (MQ=255) aaTCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTaa < 2:1465586/150‑1 (MQ=255) cAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTc < 1:4132495/150‑1 (MQ=255) cAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTc < 1:2603753/150‑1 (MQ=255) aGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCa > 1:4600822/1‑150 (MQ=255) aGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAACCTTAATTCa > 1:1360758/1‑150 (MQ=255) gCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCAt < 1:1838086/150‑1 (MQ=255) ggCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATaa < 2:1739737/150‑1 (MQ=255) ggCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATaa < 1:3815355/150‑1 (MQ=255) gCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAAc > 2:1635311/1‑150 (MQ=255) cATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTa > 1:550377/1‑150 (MQ=255) aTAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAg > 2:5248703/1‑150 (MQ=255) aGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGcg < 1:3777306/150‑1 (MQ=255) aGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGcg < 1:5600243/150‑1 (MQ=255) gTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGcgt < 1:4828348/150‑1 (MQ=255) gTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGcgt > 1:2617817/1‑150 (MQ=255) gTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGcgt < 1:3915/150‑1 (MQ=255) aCGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGcgtcg > 2:421666/1‑150 (MQ=255) gtgtCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTaa > 1:2248182/1‑150 (MQ=255) gtgtCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTaa > 2:3291013/1‑150 (MQ=255) tgtCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTaaa < 2:3610316/150‑1 (MQ=255) gtCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAg < 2:4084985/150‑1 (MQ=255) gtCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAg < 2:2454757/150‑1 (MQ=255) tCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAgg < 1:321618/150‑1 (MQ=255) cTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGt > 2:62453/1‑150 (MQ=255) cTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACCGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGt < 2:4870733/150‑1 (MQ=255) tGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGtt > 1:5434453/1‑150 (MQ=255) tGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGtt < 2:4532647/150‑1 (MQ=255) aaGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTcc > 2:5659311/1‑150 (MQ=255) aGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCa > 1:2902767/1‑150 (MQ=255) ggATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAAt < 2:686971/150‑1 (MQ=255) aTTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGtttcgttcg > 1:40595/1‑143 (MQ=255) tGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATcgccg > 2:1481314/1‑150 (MQ=255) gATGCTTGCCATGGCAATAATTAGCACCGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATcgccgc > 1:4284254/1‑150 (MQ=255) cTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGt < 1:2935560/150‑1 (MQ=255) ttGCCNTGGCAATAATTAGCACCGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTg > 1:5733361/1‑150 (MQ=255) aTGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACg < 2:538186/150‑1 (MQ=255) ggCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTa < 2:5219150/150‑1 (MQ=255) gCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTAc > 2:4352042/1‑150 (MQ=255) cAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACa > 1:3956196/1‑150 (MQ=255) aataatTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACAg < 1:5024215/150‑1 (MQ=255) aataatTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACAg > 1:1924025/1‑150 (MQ=255) aataatTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACAg > 1:1693004/1‑150 (MQ=255) ataatTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTGGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACAGa > 1:4252225/1‑150 (MQ=255) ataatTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACAGa > 1:3693590/1‑150 (MQ=255) aatTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACAGAAt > 2:4004089/1‑150 (MQ=255) aGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACAGAATCAcc < 2:188308/150‑1 (MQ=255) gCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACAGAATCACCt < 1:1443847/150‑1 (MQ=255) tGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACAGAATCACCTCAgg < 1:2404699/150‑1 (MQ=255) | TTGGGGTGAACGATGCTGGGTCTTACTTTTGCGCCAGGTTTCGCTGTGCGGACAAGAACCTGCCACAGCGCCTTTCCGTTAAAGGGAATCAGCGGCCATAAGTACGGTGTCTGAAGGGATTTGATGCTTGCCATGGCAATAATTAGCACTGTAAATCCGATGACGAGCCCTTTTATATGAAATAAAGCAACGAGTATCATGAGGACAAGACGGCTCATTTTGTTTGCCAAGCTTAATTCATAACTAGGCGTCGTAAAGGTTCCAATCGCCGCAAGTGAGACGTACAGAATCACCTCAGG > CP006881/2256271‑2256569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |