| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 53,413 | G→A | 100% | intergenic (+45/‑94) | U712_00230 → / → U712_00235 | Protein sspF/4‑diphosphocytidyl‑2‑C‑methyl‑D‑erythritol kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 53,413 | 0 | G | A | 99.4% | 1186.9 / ‑3.4 | 338 | intergenic (+45/‑94) | U712_00230/U712_00235 | Protein sspF/4‑diphosphocytidyl‑2‑C‑methyl‑D‑erythritol kinase |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (141/195); total (142/196) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 339 total aligned reads displayed.
TGGAGGCTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTGGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATCAATCTGTCACT > CP006881/53266‑53559 | ggAGGCTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGat < 1:4352358/150‑1 (MQ=255) ggAGGCTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGat < 2:2883581/150‑1 (MQ=255) ggAGGCTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGat > 2:41134/1‑150 (MQ=255) ggAGGCTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGat > 1:5664300/1‑150 (MQ=255) aGGCTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGatat < 2:3278268/150‑1 (MQ=255) aGGCTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGatat > 2:135303/1‑150 (MQ=255) aGGCTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGatat > 1:1858379/1‑150 (MQ=255) ggCTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGAtata > 1:2712735/1‑150 (MQ=255) cTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATaaa < 2:4043855/150‑1 (MQ=255) cTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATaaa < 2:2066428/150‑1 (MQ=255) gggTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATAc > 2:2521216/1‑150 (MQ=255) gTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGTAATCGCCTTACAGCAAATGGCTCAAAATCAGAATAACAGATAAGGATGTGACCCGGGGGTCGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACAt < 1:1060482/150‑1 (MQ=255) gTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACAt < 1:4216121/150‑1 (MQ=255) gTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACAt < 2:5690510/150‑1 (MQ=255) gAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATATCCGATAACGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATaa > 2:3157540/1‑150 (MQ=255) aaTTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATg < 1:3665880/150‑1 (MQ=255) aaTTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATg < 1:314342/150‑1 (MQ=255) aTTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATgg > 2:3867971/1‑150 (MQ=255) ttCGGGCCCGCGATGCCGGTTACATGGTGAAGCGTGCTTTTGATATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTCTTTATTTTAGATATAAATACATAATggg > 1:1107242/1‑150 (MQ=255) ttCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATggg < 1:450315/150‑1 (MQ=255) tCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGc < 1:4820921/150‑1 (MQ=255) gCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGaa > 1:120069/1‑150 (MQ=255) cgcgATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAatat < 1:2916821/150‑1 (MQ=255) gcgATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATg < 2:3612775/150‑1 (MQ=255) gATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGa < 1:2097453/150‑1 (MQ=255) gCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGatat < 2:5416894/150‑1 (MQ=255) ggTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGtt > 2:4196957/1‑150 (MQ=255) ggTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGtt > 2:2225670/1‑150 (MQ=255) gTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTc < 2:178961/150‑1 (MQ=255) gTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTc > 1:3343682/1‑150 (MQ=255) aaCATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCAt > 1:5032136/1‑150 (MQ=255) aCATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATc < 1:5138951/150‑1 (MQ=255) aTGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGTTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCt < 2:2797376/150‑1 (MQ=255) tGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTg < 1:3032790/150‑1 (MQ=255) tGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTAc < 2:147842/150‑1 (MQ=255) gAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACt < 2:2023893/150‑1 (MQ=255) aGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTc < 2:185669/150‑1 (MQ=255) gCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGCATGTGACCCGGGGGACGTGCTGTTCCCTGATTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCa > 1:5386957/1‑150 (MQ=255) tGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAAt > 1:3603262/1‑150 (MQ=255) cTATTGAAATCGCCGAACAGCAAATGGCTCAGAGTCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAAtgt < 2:2934880/150‑1 (MQ=255) cTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAAtgt < 2:4289728/150‑1 (MQ=255) tGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATa < 1:4879932/150‑1 (MQ=255) tGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATa < 2:4404425/150‑1 (MQ=255) gAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATAc > 1:3169511/1‑150 (MQ=255) tCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCCATAAGGATGTGACTCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATg < 1:3769163/150‑1 (MQ=255) cGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGt < 2:5252497/150‑1 (MQ=255) gCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGtt < 2:781375/150‑1 (MQ=255) gAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCAt > 1:1792254/1‑150 (MQ=255) aCAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATAc > 1:3429738/1‑150 (MQ=255) gCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTa < 2:3568831/150‑1 (MQ=255) gCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTa < 1:484010/150‑1 (MQ=255) aaaTGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATg > 2:3705703/1‑150 (MQ=255) aTGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGtt < 1:574977/150‑1 (MQ=255) gCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAg < 2:2300730/150‑1 (MQ=255) cagaatcagaatAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATg < 2:2404569/150‑1 (MQ=255) gaatcagaatAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGga > 2:3816660/1‑150 (MQ=255) aatcagaatAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGgag > 1:3520220/1‑150 (MQ=255) atcagaatAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGgaga > 1:836862/1‑150 (MQ=255) gaatAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGTGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTa > 1:5486365/1‑150 (MQ=255) atAATCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAgg < 1:4686205/150‑1 (MQ=255) atAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAgg < 2:5510060/150‑1 (MQ=255) atAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGAGCTGAATAAGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAgg > 2:61660/1‑150 (MQ=255) tAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGt < 2:1931324/150‑1 (MQ=255) aCCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGa > 2:5620447/1‑150 (MQ=255) ccGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTATTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTACATGTAGAAGTAGGTGaa > 1:389267/1‑150 (MQ=255) gATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAg > 1:2839691/1‑150 (MQ=255) aaGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTa < 1:3836236/150‑1 (MQ=255) aGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTAt < 1:5244630/150‑1 (MQ=255) gATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGc < 1:715927/150‑1 (MQ=255) aTGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCg > 1:2333641/1‑150 (MQ=255) tgACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTAt > 2:518246/1‑150 (MQ=255) gACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTAtt < 1:3274490/150‑1 (MQ=255) cccGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTAtttt < 2:951775/150‑1 (MQ=255) cccGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTAtttt < 2:120069/150‑1 (MQ=255) ccGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTa < 2:5049269/150‑1 (MQ=255) cGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAg > 1:5551468/1‑150 (MQ=255) gggggACGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGGGGATTTTAGa > 1:4548879/1‑150 (MQ=255) gggACGTGCTGTTCACTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATACTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTACaaa < 1:2292661/150‑1 (MQ=255) aCGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAg > 2:128814/1‑150 (MQ=255) aCGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAg < 2:5134480/150‑1 (MQ=255) cGTGCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAgc > 1:966143/1‑150 (MQ=255) gCTGTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGcc > 1:1006316/1‑150 (MQ=255) gTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGc < 2:1565557/150‑1 (MQ=255) gTTCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGc > 2:3075094/1‑150 (MQ=255) tCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTa > 2:2692988/1‑150 (MQ=255) tCCCTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTa < 2:4802889/150‑1 (MQ=255) cccTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTaa < 1:4260736/150‑1 (MQ=255) ccTGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAg < 2:1886322/150‑1 (MQ=255) tGGTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGAt < 1:4043040/150‑1 (MQ=255) ggTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATc > 2:4656056/1‑150 (MQ=255) ggTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATc < 2:4903947/150‑1 (MQ=255) ggTTTTTTTATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATc < 1:2466862/150‑1 (MQ=255) ttttttATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATCAAt < 1:135303/150‑1 (MQ=255) tttttATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATCAATc < 1:410304/150‑1 (MQ=255) tttATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATCAATCTg > 2:4561311/1‑150 (MQ=255) tttATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATCAATCTg < 1:2225670/150‑1 (MQ=255) tATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAACGCGCCAGCTAAGATCAATCTGTc < 2:4469109/150‑1 (MQ=255) tATTTTAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATCAATCTGTc > 1:4948121/1‑150 (MQ=255) ttttAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATCAATCTGTCAc > 1:2576818/1‑150 (MQ=255) ttttAGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATCAATCTGTCAc < 1:1504525/150‑1 (MQ=255) | TGGAGGCTGGGGTGAAATTCGGGCCCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCCGAACAGCAAATGGCTCAGAATCAGAATAACCGATAAGGATGTGACCCGGGGGACGTGCTGTTCCCTGGTTTTTTTATTTTGGATATAAATACATAATGGGCTGAATATGGATATGTTCATCCTGTACTTCAAATGTGATACAATGTTCATACTTATGTTTAGATGGAGAAGTAGGTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATCAATCTGTCACT > CP006881/53266‑53559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |