| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,618,134 | C→T | 17.3% | G20S (GGT→AGT) | U712_18650 ← | putative transporter YwkB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,618,134 | 0 | C | T | 17.3% | 878.6 / 125.4 | 338 | G20S (GGT→AGT) | U712_18650 | putative transporter YwkB |
| Reads supporting (aligned to +/- strand): ref base C (121/153); new base T (24/35); total (146/192) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.04e-01 | |||||||||||
Only 100 of 363 total aligned reads displayed.
ATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAATTATTTCGCGA > CP006881/3617986‑3618283 | aTTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAAccc > 1:5556608/1‑150 (MQ=255)aTTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTACCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAAccc < 1:4992197/150‑1 (MQ=255) ttAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCa < 1:2768797/150‑1 (MQ=255) aaGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCa < 2:4720787/150‑1 (MQ=255) aaGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCa < 2:2913973/150‑1 (MQ=255) aGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCAc < 1:4589297/150‑1 (MQ=255) ggTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACg < 2:3687591/150‑1 (MQ=255) cTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATAGCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACTCAGCACGATaa < 1:2907715/150‑1 (MQ=255) tgtgATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAAAGTCCTGCAAACCAACCCAGCACGATAACa > 1:2971941/1‑150 (MQ=255) gtgATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACTCAGCACGATAACaa > 1:2740479/1‑150 (MQ=255) gATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAaag > 1:4400244/1‑150 (MQ=255) aTAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAaaga < 2:1711170/150‑1 (MQ=255) tAAAAATTCACATCTGGAAGTTGTCAAAATACCAGCGATAAATTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACATGGCATCATAACTTACAAAATGTCCTGCAAAACATCCCAGCACGATAACAtagaa < 2:244603/150‑1 (MQ=255) aaaaTTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACTCAGCACGATAACAAagaaga < 1:2098030/150‑1 (MQ=255) aaaaTTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAagaaga > 1:126324/1‑150 (MQ=255) aaTTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATc > 1:750194/1‑150 (MQ=255) aaTTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATc < 2:5405279/150‑1 (MQ=255) aTTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCg < 2:4216230/150‑1 (MQ=255) cACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGgcg > 1:5295059/1‑150 (MQ=255) ttCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCa < 1:1008184/150‑1 (MQ=255) tCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCag > 1:657586/1‑150 (MQ=255) cTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACTCAGCACGATAACAAAGAAGATCGGCGCCagg < 1:5675786/150‑1 (MQ=255) cTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCagg < 1:2592590/150‑1 (MQ=255) cTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCagg > 1:5822414/1‑150 (MQ=255) cTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCagg < 2:2404987/150‑1 (MQ=255) tGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCagga > 2:2651539/1‑150 (MQ=255) tGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACAATAACAAAGAAGATCGGCGCCagga > 1:3357247/1‑150 (MQ=255) gAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCaggagg > 1:5048208/1‑150 (MQ=255) aGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACTCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGAt < 2:3422672/150‑1 (MQ=255) gTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACTCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGAtt < 1:5162110/150‑1 (MQ=255) gTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAAGAGGAtt > 1:3825327/1‑150 (MQ=255) ttGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTa > 1:1046982/1‑150 (MQ=255) gTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAg < 2:1164969/150‑1 (MQ=255) tCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGa < 2:3380215/150‑1 (MQ=255) cAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGat > 1:157240/1‑150 (MQ=255) aaaaTACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGata < 2:1299903/150‑1 (MQ=255) aTACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCTTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCt > 1:4428594/1‑150 (MQ=255) aTACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCt > 1:3637284/1‑150 (MQ=255) aTACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCt > 1:4781470/1‑150 (MQ=255) aTACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCt > 1:4695967/1‑150 (MQ=255) aCCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCTTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTaa < 1:4836048/150‑1 (MQ=255) gCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATg < 2:284548/150‑1 (MQ=255) aaGTGAGCTGGAAGTGCGTATTTCGTTACTATCGTACTTAGCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCaaa < 2:3264523/150‑1 (MQ=255) gAGCTGGAAGTGCTTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACGCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAatat < 1:204597/150‑1 (MQ=255) gAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAatat < 1:3074433/150‑1 (MQ=255) gAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAatat < 2:3108788/150‑1 (MQ=255) aGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACTCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATAtt < 1:4859896/150‑1 (MQ=255) ggAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTctcc > 1:198020/1‑150 (MQ=255) aGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCtcctcc > 1:1353207/1‑150 (MQ=255) gTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCa < 1:539972/150‑1 (MQ=255) tGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCaa > 1:908204/1‑150 (MQ=255) gCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCaaa < 1:4510851/150‑1 (MQ=255) gTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATc > 2:3183758/1‑150 (MQ=255) tttCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTa > 1:5350978/1‑150 (MQ=255) tttCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTa < 2:4789953/150‑1 (MQ=255) ttCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACTCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTAt > 1:2263148/1‑150 (MQ=255) tCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATg < 2:1988055/150‑1 (MQ=255) ttACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAAAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTcc > 1:4192316/1‑150 (MQ=255) tACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCg > 2:4177557/1‑150 (MQ=255) aCTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGt > 1:392323/1‑150 (MQ=255) cTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACTCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGta < 1:1487853/150‑1 (MQ=255) cTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGta > 1:3890419/1‑150 (MQ=255) aCGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATAc < 2:2738392/150‑1 (MQ=255) gTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACtt < 2:4400256/150‑1 (MQ=255) tACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACttt < 2:4860170/150‑1 (MQ=255) tACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACttt < 1:5838215/150‑1 (MQ=255) aCTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTa < 1:3509443/150‑1 (MQ=255) cTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAg > 1:3314956/1‑150 (MQ=255) cccTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTa > 2:5026310/1‑150 (MQ=255) cTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACa > 1:3448999/1‑150 (MQ=255) ttttGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACaa < 2:5618522/150‑1 (MQ=255) tGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACaaaaa > 1:2377342/1‑150 (MQ=255) gCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACTCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCCCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAg < 2:2282552/150‑1 (MQ=255) ccGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGc < 2:5337191/150‑1 (MQ=255) cGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTTCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCt > 1:1723569/1‑150 (MQ=255) cTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTc > 1:997246/1‑150 (MQ=255) atcatAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCgg > 1:2673826/1‑150 (MQ=255) atAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACa > 1:2809228/1‑150 (MQ=255) tAACTTCCAAAATGTCCTGCAAACCAACACAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATAACTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGCACAg < 2:4026655/150‑1 (MQ=255) ttCCAATATGTCCTGCTAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTGAAAATATTCTCCTCCAAATGCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGaaaa > 1:5338801/1‑150 (MQ=255) ttCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGaaaa < 2:750194/150‑1 (MQ=255) cAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAAtt > 1:2706101/1‑150 (MQ=255) cAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAAtt > 1:723559/1‑150 (MQ=255) aaaTGTCCTGCAAACCAACTCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTa < 1:2858504/150‑1 (MQ=255) ccTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCt > 1:4001727/1‑150 (MQ=255) cTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTa > 2:3762212/1‑150 (MQ=255) cTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTa > 1:1803319/1‑150 (MQ=255) tGCAAACCAACTCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTaa > 1:21469/1‑150 (MQ=255) tGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGTTaa > 1:114108/1‑150 (MQ=255) cAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAatt < 2:5236945/150‑1 (MQ=255) aaaCCAACTCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAatta < 2:3829678/150‑1 (MQ=255) aaaCCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAatta < 2:4305545/150‑1 (MQ=255) aaaCCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCACAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAatta < 2:574582/150‑1 (MQ=255) aaccaaccCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAattat < 1:3211470/150‑1 (MQ=255) ccaactCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAATTAttt < 2:4626205/150‑1 (MQ=255) ccaaccCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAATTAttt < 2:1548561/150‑1 (MQ=255) caactCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAATTATTTc < 1:2478847/150‑1 (MQ=255) caaccCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAATTATTTc < 1:525413/150‑1 (MQ=255) caaccCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAATTATTTc > 1:4972880/1‑150 (MQ=255) ccAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAATTATTTCGCGa > 2:2026442/1‑150 (MQ=255) | ATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTGCAAACCAACCCAGCACGATAACAAAGAAGATCGGCGCCAGGAGGATTAAGATATCTAAGATGCTCAAAATATTCTCCTCCAAATCCTATGTCCGTATACTTTAGCTTTACAAAAAGCTTTCCCTCGGACAGAAAAATTTACTCGCTAATTATTTCGCGA > CP006881/3617986‑3618283 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |