| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,153,615 | G→C | 5.9% | S171C (TCC→TGC) | U712_16195 ← | putative xanthine dehydrogenase subunit E |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,153,615 | 0 | G | C | 5.9% | 544.0 / 4.5 | 245 | S171C (TCC→TGC) | U712_16195 | putative xanthine dehydrogenase subunit E |
| Reads supporting (aligned to +/- strand): ref base G (105/84); new base C (3/22); total (109/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.95e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 247 total aligned reads displayed.
TGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTCCCGAAACAATGCTTTA > CP006881/3153468‑3153764 | cGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTcc < 1:5795723/150‑1 (MQ=255) tCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTTCGGGTTTTAAATGGCGGAATCCCg > 1:2305560/1‑150 (MQ=255) tttGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTGCGGCTTTTAAAAGCCGGACTCCCGTc > 1:2193560/1‑150 (MQ=255) tttGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCCTc > 2:4906436/1‑150 (MQ=255) ttGCTTTGTGTTCACTAATCTTTTTTTACTCCAGAAGCTGTCATGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCt < 2:3931345/150‑1 (MQ=255) ttGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTCCCCCCAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGCCCGGCTTTTAAAAGCCGAACTCCCGTCt < 2:4706015/150‑1 (MQ=255) gCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTAc < 2:4578187/150‑1 (MQ=255) gCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTACGGCTTTTAAAAGCCGGACTCCCGTCTAc > 2:2634339/1‑150 (MQ=255) gCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCAACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCAAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTAc < 2:118432/150‑1 (MQ=255) tATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTTCGGCTTTTAATAGCCGGACTCCCGTCTAccc > 2:4471461/1‑150 (MQ=255) tgtgTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTAccccc < 1:722253/150‑1 (MQ=255) gctgtTCACTAATTTTTTTGTAATCCAGAACCGGTCAAGTTCTACGAGTTTTATCGTGTGTTTTCCCACAACGCTTGTGCGTCTTGATCGGGCTGACTGATTGAGGCTAAAAAAGTCCGGCTATAAAAATCCTGACTCCCGTCTAccccc < 2:4952152/148‑1 (MQ=255) gtgtTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTCCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCg < 2:1678478/150‑1 (MQ=255) tCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGTGGCTAAAAAAGTTCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCT‑TTCa > 1:367155/1‑150 (MQ=255) tCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCa < 2:2444856/150‑1 (MQ=255) cACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCC‑CTCaa > 1:5080864/1‑150 (MQ=255) cTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTACCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGCCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAAct < 1:4844707/150‑1 (MQ=255) aaTCTTTTTGTAATCCAGAAGCTGTCCCCGTTTANCCGATTTATGGTCGGTTTGCCCGCAACGCGTGTGGGTGTTGATTGCGCTGTCTGACTGAGGCTAAAAAAGTCCGACTTTTAAAAGCCGGTCTCCCCACCACCCCCG‑CTCAActct > 1:4672122/1‑150 (MQ=255) ctCTTTTTGTAATCAAGAAGCTGCCAAGTTCTACGAGATTTAACGTGTGTTTTCCCACAACGCTTCTGCTTCTTGATCGCGCTGTCTGACTGAGGCAAAAAAAGTCCGGCTTTTAAAAGCCGTACTCCCGTCTACCCCCG‑TTCAActctc < 1:3534142/149‑1 (MQ=255) aTCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGTCTGAGGCTAAAAAAGTCCGGCTTTTAAAAACCGCAATAGCCTCTACCCCCA‑TTCAActctc > 1:2619621/1‑150 (MQ=255) ccTTTTTGTAACCAAAAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTCCCCACACCGTTTCTGCTTCTTGATCGCGCTGTCTGTTTGAGGCTAAAAAATTCCGCCTTTTAAAACCCGTACTCCCGTCTACCCCCG‑TTCAActctct < 2:1844103/149‑1 (MQ=255) cTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTACGGCTTTTTAAAGCCGGACTCCCGGCTACCCCCC‑TTCAACCCtctt > 1:1100090/1‑150 (MQ=255) tttttGTAATCCAGAAGCTGTCAAGTTCTACGAGTTTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCGGGACTCCCGTCTACCCCAG‑TTCAACTCtcttc < 1:3936154/150‑1 (MQ=255) tttttGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGGCTCCCGTCTACCCCCG‑TTCAACTCtcttc > 1:672558/1‑150 (MQ=255) tttttGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCC‑TTCAACCCtcttc > 1:4356827/1‑150 (MQ=255) tGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTCCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAAt < 2:2486938/150‑1 (MQ=255) tGTAACCCAGAAGCAGCCAAGTTCTCCGAGANTTACTGTGTGTTTACTCAAAACGCTTCTGCGCCTTGCTCGCGCTGTCTGACTGAGGCAAAAAAAGTCCGCTTTTTAAAAGCCTAACTTCCGTCTACCCCCG‑TTCAACTCTCTTCTAAt < 1:2096949/150‑1 (MQ=255) tAACCCAGAACCTCCCACGTTCAACAATCTTCATCGTCTTTTTTCCCCCTCCGCTTCTCCTTCTTGACCGCGCTGTCTGACTGAGCGTAAAAAAGCCCGTCTTTTAAAACCCCCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATcc < 1:5544809/150‑1 (MQ=255) acaccAGAAGCTCACAAGTTCTAGGAGATTTATCGTGTGTTTCCCCCCACCGCTCCTGCGTCTTGATCGCGCTGTCTTACTGAGGCAAAAAAAGTCCGGCTTTTAAAAGCCCAACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCt < 1:1793427/147‑1 (MQ=255) aaTCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCTGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCt < 2:2767965/150‑1 (MQ=255) aaTCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCt < 2:4004000/150‑1 (MQ=255) tCCAGAAGCTGTCAAGTCCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGc < 2:592713/150‑1 (MQ=255) aGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAg > 2:4668948/1‑150 (MQ=255) gAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTGCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGc > 2:2801141/1‑150 (MQ=255) gAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGc > 2:3079349/1‑150 (MQ=255) aaGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGGGCTGTCTGACTGAGGCAAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCt < 2:5181516/150‑1 (MQ=255) aaGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCt < 1:1373410/150‑1 (MQ=255) aaGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCAAAAAAAGTCCGGCTTTTAAAAGCCCGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCt < 1:4748629/150‑1 (MQ=255) aGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTg < 2:5359372/150‑1 (MQ=255) aaGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCAt < 2:3834840/150‑1 (MQ=255) aGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGCGTTTTAAAAGCCGGGCTCTCGTCAACGCCCC‑TTCAACCCCCTTCTAATACTGCAAGCTGCCCGCaga > 1:1602288/1‑148 (MQ=255) ttCTAGGAGTTTTATCTTGTGTTTTCCCACAACTCTTCTGCGTTTTGATCCCGCTGTCTGACTGAGGCAAAAAAAGTCCGGCTTTTAAAAGCCGAACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAAt < 1:325072/150‑1 (MQ=255) ttCTAGGAGATTTATCGTGTTTTTTCCCACAACGCTTCTGCTTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAAt < 1:4576365/150‑1 (MQ=255) tCTACGAGTGTTATCGTGTGTTTTCCAACAACGTTTCTGCGTCTTGATCCCGCTGTCTGATTGAGGTTAAACAAGTCCGCCCTTTAAAAGCCTTACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATc < 1:917017/150‑1 (MQ=255) cTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTACGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCC‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAAAcc > 2:1613223/1‑150 (MQ=255) tACGAGATTTATCGTGTGTTTTCCCACACCGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATccc < 2:5316672/150‑1 (MQ=255) tACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGACGGACTCCCCTCTTCCCCCGCTTCAAC‑CTCTTCCAATCCCTCAAGCTAGCCCCATAATccc > 1:3381962/1‑150 (MQ=255) tACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTACGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGGAAGCTGACCGCATAATccc > 2:3029845/1‑150 (MQ=255) agaTTTACTGTGTGTTTTCCCCCAACTCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCAGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCa < 2:4856085/150‑1 (MQ=255) gaTTTATCTGGTGTTTTCCCACACCGCTTCAGCGTCTTGATCGAGCTGTCTGTCTGAGCCTAAAAAAGTCGGGCTTTTAAAACCCAGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCAt < 2:3923683/150‑1 (MQ=255) tttATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAATTCCGGCTTTTAAAAGCCGCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATAc < 2:777863/150‑1 (MQ=255) tttATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATAc > 2:4344651/1‑150 (MQ=255) gtgtttTTTCCCACAACGCTTTTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTa < 1:2828458/150‑1 (MQ=255) gtgtctTTTCCCACAAGGCTTCTGCGTCTTGATCGCCCTGTTTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCAGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTa < 2:4319195/150‑1 (MQ=255) tgtgtTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTac < 2:4612423/150‑1 (MQ=255) tCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTTTTCTAATCCTTCAAGCTGGCCACATAATCCCGCCATACCCCGTACACCGGca > 2:2089752/1‑150 (MQ=255) accGCTTCTGTGTTTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAAtt < 2:189689/148‑1 (MQ=255) cGCTTCTGCGCCTTGATCGTGCTGTCCACCTGAGGCAAAAAAAGTCCGGCTTTTAAAACCCGCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAACCCCGCCATACCCGGTACACCGGCACAAATTcc < 2:5620871/150‑1 (MQ=255) gCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATAACCGGGACACCGGCACAAATTccc > 1:3602729/1‑150 (MQ=255) gCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTccc < 2:3473487/150‑1 (MQ=255) cTTCTGCTTCTTGATCGCGCTGTCTGATTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCCTACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTcccc < 1:4996896/150‑1 (MQ=255) ttCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTTCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCCCCATACCCGGTACACCCGCACAAATTCCCCg > 1:5155032/1‑150 (MQ=255) ttCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCTGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCg < 2:4642929/150‑1 (MQ=255) ttCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCg < 2:5429655/150‑1 (MQ=255) tCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGc < 2:2290129/150‑1 (MQ=255) tCTTGATCGCGCTGTCTGACTGAGGCTAAATAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGccc < 2:2195556/150‑1 (MQ=255) cTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCct < 2:1051737/150‑1 (MQ=255) gATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAAATTCCCCCCAGCcctcct > 1:3391476/1‑150 (MQ=255) gcgcTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCta < 2:2697119/150‑1 (MQ=255) cgcTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCtat < 2:3749115/150‑1 (MQ=255) cTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACATCGGCACAAATTCCCCGCCAGCCCCTCTTCTatat > 1:3730035/1‑150 (MQ=255) tgcctgactgaGGCTAAAAAAGTCCGGCTTTTAAAAGCCGTACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATc < 2:5711731/147‑1 (MQ=255) tGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATc < 1:2468595/150‑1 (MQ=255) actgactgaGCCTAAAAAACTGGGGCTTTTAAAACCCCTACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCtt < 2:5265081/149‑1 (MQ=255) actgaGGCTAAAAAAGTCCGGCTTTTAGAACCCCTACTTCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTtctc < 2:862161/150‑1 (MQ=255) ctgaGGCTAAAAAAGTGCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGAACACCGGCACAAAATCCCCGCCAGCCCTTCTTCTATATCTTTGTCa > 1:5450199/1‑150 (MQ=255) ctgaGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCa < 1:4190560/150‑1 (MQ=255) gaGGCTAAAAAAGCCAGCCTTTTAAAAGCCCCACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGa < 1:3289609/150‑1 (MQ=255) ggaaaaaaaCTCCGGCTTTTAAAAGCCCGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAgg < 1:84326/147‑1 (MQ=255) gCTAAAAAAGTCCGGCTTTTAAAAGCCGAACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAgg < 1:4656073/150‑1 (MQ=255) cTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGt < 2:2038989/150‑1 (MQ=255) cTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGt > 2:4791380/1‑150 (MQ=255) aaaaaaGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTg < 2:5638051/150‑1 (MQ=255) caaGTCCGGCTTTTAAAAGCCGCACTTCCGTCTACCCCTG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAAACCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAgg < 2:2305560/149‑1 (MQ=255) aGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAgggg > 2:2902928/1‑150 (MQ=255) gTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGGAGGTTGGGGGGt > 2:3017772/1‑150 (MQ=255) gTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGt > 2:737125/1‑150 (MQ=255) tCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGtt > 2:252649/1‑150 (MQ=255) tCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGtt > 1:1001053/1‑150 (MQ=255) cGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTc > 2:3628000/1‑150 (MQ=255) gCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTccc < 1:4325129/150‑1 (MQ=255) tttAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTCCCGaa > 2:2248133/1‑150 (MQ=255) ttAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTCCCGaaa > 2:3223336/1‑150 (MQ=255) aaaaGCCGTACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTCCCGAAACa < 2:1100090/150‑1 (MQ=255) aaaaGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTCCCGAAACa < 2:451604/150‑1 (MQ=255) aaaGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGTCCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTCCCGAAACaa > 2:800221/1‑150 (MQ=255) gCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTCCCGAAACAATGc < 2:448216/150‑1 (MQ=255) ccGTACTCCCGTCTACCCCCG‑TTCAACTCTTTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTCCCGAAACAATGCt < 1:1672351/150‑1 (MQ=255) cGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTCCCGAAACAATGCtt > 1:2731300/1‑150 (MQ=255) gACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTCCCGAAACAATGCTTTa < 2:3388586/150‑1 (MQ=255) | TGGCGTCTTTGCTATGTGTTCACTAATCTTTTTGTAATCCAGAAGCTGTCAAGTTCTACGAGATTTATCGTGTGTTTTCCCACAACGCTTCTGCGTCTTGATCGCGCTGTCTGACTGAGGCTAAAAAAGTCCGGCTTTTAAAAGCCGGACTCCCGTCTACCCCCG‑TTCAACTCTCTTCTAATCCTGCAAGCTGACCGCATAATCCCGCCATACCCGGTACACCGGCACAAATTCCCCGCCAGCCCTTCTTCTATATCTTTGTCAGAAGGTTGAGGGGTTTCCCGAAACAATGCTTTA > CP006881/3153468‑3153764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |