| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,350,164 | G→T | 5.4% | intergenic (+12/+15) | U712_17215 → / ← U712_17220 | Hypothetical Protein/Phenolic acid decarboxylase padC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,350,164 | 0 | G | T | 5.4% | 802.7 / 4.1 | 338 | intergenic (+12/+15) | U712_17215/U712_17220 | Hypothetical Protein/Phenolic acid decarboxylase padC |
| Reads supporting (aligned to +/- strand): ref base G (172/115); new base T (8/22); total (191/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.39e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 343 total aligned reads displayed.
ATTTTGTCGGCCGTGGTATGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACAACGTATTTTGGATACGT > CP006881/3350015‑3350313 | attTTGTCGGCCGTGGTATGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCg < 2:1496061/150‑1 (MQ=255) tgccGGCCGTGGTATGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGtt < 1:5091391/147‑1 (MQ=255) tGTCGGCCGTGGTATGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGtt < 2:236704/150‑1 (MQ=255) gctgtgtTATGTTTACGGGCCACAGTCTATTACCAGCCTATGCGTGGGACTGCCACCATACTGTTTTCCGGGGGATTTGTGATGGTCCCCCCATACCAAGCAAAAAAAAACCCCGAAAAAGAGAAGTATTTCTCTTTTCCGGGTTTTTAt < 2:5541197/147‑1 (MQ=255) gCCGTGGTATGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTAt > 2:4681814/1‑150 (MQ=255) ccGTGGTATGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACAAGGAAAAGAGAAGTAAATCTCTTTTCCCGGTTTTTAtt > 1:3749328/1‑149 (MQ=255) cGTGGTATGTTTAGGGGACTCAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTTTTTTTCGGGGGAATTGTGATGGTTCCCGCATACTCAGAAAAAAGAAAACCCGGAAAAGAGAATTAATTCTCTTTTCCGCGTTTTTATGt < 1:413802/150‑1 (MQ=255) gTGGTATGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGtt > 2:2712658/1‑150 (MQ=255) gTGGTATGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGtt > 2:5167384/1‑150 (MQ=255) ggTATGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACAAGGAAAAGAGAAGTAAATCTCTTTTCCGGGTTTTTATGTtta > 1:2594253/1‑150 (MQ=255) gTATGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCAGAAAAGAGAAGTAATTCTCTTTGCCGGGGTTTTATGTttat > 2:1234484/1‑150 (MQ=255) tATGTTTACGGGACACTGTCTATTACCAGCCTATCCGCTGGACTGGCATCATACTTTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAAAAAAAAAAAAACCGGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTttatt < 1:737525/150‑1 (MQ=255) tGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTtattat > 1:4498691/1‑150 (MQ=255) ttttACGGGACACAGCCTTTTCCCAGACTATCCGCTGGATTGGCATCATACTGTTTTTCGGGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCGGGAAAAGAGAAGTAATTTTCTTTTCCGGGTTTTTATGTTTATtata < 1:4626645/149‑1 (MQ=255) gTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCAGGGAAAGTGAAGTAATTCTCTTTTCGGGGTTTTTATGTTTATtata > 1:202710/1‑150 (MQ=255) ttACGGGACACAGCCTATTACCACCCTATGCGCTGGACTGGCATCATATTTTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGAAAAAAAAAAACCCGGAAAAGAGAAGTAATTCTTTTTTCCGGGTTTTTATGTTTATTATAAt < 2:5242875/150‑1 (MQ=255) aggggACCCAGTCTATTACCAGCCTATGCGTTTGATTGGCATCATTCTTTTTTTCGCGGGAATTTTGATGGTTCCCTCTTACAAAGCAAAAAGAAAACCAGGAAAAGAGAAATAATTCCCTTTTCCGAGTTTTTATGTTTATTATAATCt < 1:4853487/148‑1 (MQ=255) aggggACACAGTCTTTTACCACCCTATGCGCTGGCCTGCCACCATCCTGTTTTCCGGGGGATTTGTGATGGTCCCCGCATACTAAGAAAAAAAAAAACCCGGAAAAGAGAAGTAATTCTTTTTCCCGGGTTTTTATGTTTATTATAATCt < 2:1461593/148‑1 (MQ=255) aCGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCGGGAAAAGAGAAGTAATTCTCTTTCCCGGGTTTTTATGTTTATTATAATCt < 2:2191502/150‑1 (MQ=255) aCGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCt > 2:5267712/1‑150 (MQ=255) cGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAAAGAAGTAATTCTCTTTTCCCGGTTTTTATGTTTATTTTTATCtt > 1:3106228/1‑150 (MQ=255) cGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCAGGAAAAGAGAAATAATTCTCTTTTCCGGGTTTTTTTGCTtattattaattt > 1:1641163/1‑144 (MQ=255) acacAGCCTTTTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTCCCCGCATACTCAGCAAAAAGAAAACCGGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCcg < 2:2833477/150‑1 (MQ=255) cacaGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCcgc > 2:4277443/1‑150 (MQ=255) aGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCcgcgcg > 2:2311851/1‑150 (MQ=255) aGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTATGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCcgcgcg > 2:3639272/1‑150 (MQ=255) gTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAAACAAGAAAAAAGAAATAATTCTCTTTTCCGGGTTTTTATGTTTATTATTATCTTCCCCCGCGa > 1:1304073/1‑150 (MQ=255) ttctaaCCAGCCATGGCGCTGCCTTGCCATCATCTTGTTTTCCCAGGGATTTGTTATGGTTCCGGCATACTAACAAAAAAGAAAACCAGGAAAAGAGAGTTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAat < 1:3950083/145‑1 (MQ=255) tATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCCAata > 1:4805312/1‑150 (MQ=255) aTTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCGGGGAAAGAGAAGTAATTCTCTTTTCCTGGTTTTTATGTTTATTATAATCTTCCCGTGCGAgtat > 2:424514/1‑150 (MQ=255) aCCAGCTTATGCGCTGGACTGGCATCATTCTGTTTTCCGCGGAATTTGTGATGGTTCCCGCATACACAGCAAAAAGAAAACCGGAAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGt < 1:4977248/150‑1 (MQ=255) aCCAGCCTATGCGTTGGCCTGCCATCATACTGTTTTTCGGGGGAATTGTGATGGTTCCCCCATACTCAGCAAAAAAAAAACCCGAAAAAGAGAAGTAATTCTTTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGt < 2:1120769/150‑1 (MQ=255) ccAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGGGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTc < 2:1941137/150‑1 (MQ=255) cAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCt > 1:1944691/1‑150 (MQ=255) cAGCCTATGCGCTGGACTGGCACCATACTGTTTTTCGCGGGAATTGTGATGGTCCCCGCATACTCAGAAAAAAAAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCt < 1:400413/150‑1 (MQ=255) ccTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCAGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTc > 1:4380021/1‑150 (MQ=255) ctggcttGGCATCATACTGTTTTTCGCGGAAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCGGAAAAAGAGAAGTAATTCTTTTTCCCGTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTc < 1:2281153/144‑1 (MQ=255) ggACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCAGAAAAGAGAAGTAATTTTCTTTTTCGGGGTTTTATGTTTATTATAAATTTTCGCCGGCAATATCGTCTGTTATTNCCTCAt > 1:3648677/1‑150 (MQ=255) cTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAg > 1:961933/1‑150 (MQ=255) atcatACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGcc > 1:3893355/1‑150 (MQ=255) cTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCGGGAAAAGAGAAGTAATTATCTTTTCCGTGTTTTTATGTTTATTATAATCTTTCCCCTCCAATAACTTGTGTCATTACCTCATAAAGAGGCTTCGaa > 1:1491285/1‑150 (MQ=255) tGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCTGGGAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATTATCTTCCCGCGCGAATATCGTTTGTCATTCCCTCATAAGGAGCCTTCGaaa > 1:3826586/1‑150 (MQ=255) cgcgGTATTTGTGATGTTTCACACATACACAAAAAAAAAAAAACCAGGAAAAGAGAAGTAATTTTTTTTGCCGTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCActtc < 1:3013197/150‑1 (MQ=255) cgGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCActtctt > 1:1009340/1‑150 (MQ=255) cgGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCActtctt > 1:4264834/1‑150 (MQ=255) cgGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAAAAAACCCGGAAAAGAGAAGTAATTTTCTTTTCCTAGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCActtctt < 2:4317430/150‑1 (MQ=255) gggTATTGTGATGGTTCCCGCATACTCAGCAAAAAAAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACttcttc < 2:2774647/150‑1 (MQ=255) ggAATTGTGATGATTCCCACATACTCAGAAAAAAGAAAACACGGAAAAGACAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCTCGAATATCGACTGTCATTCCCTCATAAGGAGCCTTCAAAATCAATTCTTCg > 1:1822727/1‑150 (MQ=255) gattggtgATGTTTCCCCCATACCCAAAAAAAAGAAAACCGGAAAAAGAGAAGTATTTCTCTTTCCTCTGTTTTTATGTTTATTATAATCTTCCCGCGCGTATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGt < 1:2759879/145‑1 (MQ=255) aaTTGTGATGGTCCCCGCATACCCACAAAAAAAAAAACCGGAAAAAGAGAAGTAATTCTCTTTTCCGTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGtt < 2:3207780/150‑1 (MQ=255) aTTGTGATGGTCCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTg < 2:5055258/150‑1 (MQ=255) ttGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCCGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGt > 1:5628972/1‑150 (MQ=255) ttGTGATGGTTCCCGCATACACAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGt < 2:3155132/150‑1 (MQ=255) tgtgATGGTTCCCGCATACTCAGCAAAAAGAAAACCTGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTTCCGCCCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTc > 1:221733/1‑150 (MQ=255) gtgATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCg > 1:4867051/1‑150 (MQ=255) ttCCCGCATACTCAGCAAAAAGAAAACCTGGTAAAGAGAAGTAATTCTCTTTTCCTGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATACGGAGCCTTCGAAATCACTTCTTCGTTGTCGAATCGtt > 1:5229170/1‑150 (MQ=255) cccGCATACTCAGCAAAAAGAAAACATGGAAAACAGAAATAATTTTCATTTCCGGGTTTTTATGTTTATTATAATGTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTGCTTCa > 1:2806262/1‑150 (MQ=255) cccGCAAACTCAGAAAAAAGAATACCCGGAAAAAAGAAGTATTTCTCTTTCCAAGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCa < 2:3269834/150‑1 (MQ=255) tACTCAACAAAAAAAAACACAGGAAAAGAAAAATAATTCTTTTTTCTGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTc < 1:5409165/150‑1 (MQ=255) tACACAGAAAAAAAAAAACCGGAAAAAGAGAAGTATTTCTTTTTCCTTTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTc < 2:3421497/150‑1 (MQ=255) aCTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCa > 1:5783147/1‑150 (MQ=255) aCTAAGCAAAAAAAAAACCGGGAAAAGAAAAGTAATTCTCTTTCCCGTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCa < 2:1304073/150‑1 (MQ=255) ctaagaaaaaaaaaaaCCAGAAAAAGAGAAGTATTTCTTTTTCCAGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAg < 2:1852134/144‑1 (MQ=255) cacAGAAAAAAGAAAACCAAAAAAAAAAATGTAATTATCTTACTCGCGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTTGAGTCCTTCATTTTTCAg < 1:2521515/148‑1 (MQ=255) cTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAg > 1:836019/1‑150 (MQ=255) cAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGaa > 2:2543334/1‑150 (MQ=255) cAGCAAAAAGAAAACCCGAAAAAGAGAAGTAATTTTCTTTCCCGTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGaa < 2:3765630/150‑1 (MQ=255) cAGCAAAAAGAAAACCAGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGCAGCCTTCGAAATCACTTCTTCGTTGTCAACTCCTTCATTTTTCAGaa > 1:4697688/1‑150 (MQ=255) aacAAAAAGAAACCCCGAAAAAGAGAAGTAATTCTCTTTTCCGTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGaaa < 2:3106228/148‑1 (MQ=255) acAAAAAAAAAACCGGAAAAAGAGAATTTATTCTCTTTTCTGTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAAt < 2:5829595/149‑1 (MQ=255) gaaaaaaaaaaCCCAGAAAAGAGAATAATTTCTTTTTTCTATGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATg < 1:5166496/149‑1 (MQ=255) cAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGGTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCCTTGTCGACTTCTTCATTTTTTAGTAATg > 2:828453/1‑150 (MQ=255) aaaaaGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGt > 1:519275/1‑150 (MQ=255) aaaaaGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGt > 1:921289/1‑150 (MQ=255) aaaGAAAAACCGGGAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTTTTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCTGAAATGTaa > 2:4029269/1‑150 (MQ=255) aaGAAAACCGGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAAt < 2:4861837/150‑1 (MQ=255) aGAAAACCCGGAAAAGAGAAGTAATTCTTTTTTCTGTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAAtt < 2:2241227/150‑1 (MQ=255) aaaCCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTcc > 2:1766277/1‑150 (MQ=255) aaaCCCGGAAAAGAGAAGTAATTCTCTTTCCCGTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTcc < 2:3949165/150‑1 (MQ=255) aaCCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCg > 1:2683167/1‑150 (MQ=255) cGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCaaa > 1:346365/1‑150 (MQ=255) ggAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAAt > 1:586750/1‑150 (MQ=255) gAAAAGAGAAGTAGTTCTCTTTCCCGCGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAAtt < 2:633554/150‑1 (MQ=255) gAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAAtt > 2:2080143/1‑150 (MQ=255) aaaaGAGAAGTAATTCTCTTTTCAGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTc < 2:4422723/150‑1 (MQ=255) agagAAGTATTTCTCTTTCCCGTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAgg < 2:4498691/150‑1 (MQ=255) agagAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAgg > 2:893964/1‑150 (MQ=255) agaAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTa > 2:4968608/1‑150 (MQ=255) aaGTATTTTTCTTTTCCTCGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACa < 2:4576284/150‑1 (MQ=255) aGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACaa > 2:2913820/1‑150 (MQ=255) aGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACaa > 1:4769601/1‑150 (MQ=255) gTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACAAc > 1:5567040/1‑150 (MQ=255) aTTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACAACGTa > 1:1736072/1‑150 (MQ=255) ttttctTTTCCGTGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACAACGTAt < 2:4601158/147‑1 (MQ=255) ttCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACAACGTAt > 2:2738950/1‑150 (MQ=255) tctTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACAACGTAtttt > 1:4085231/1‑150 (MQ=255) tttttCCTGTTTTTTATGTTTATTATAATCTTCCTGTGCGAATATCGTCTGTCATTTCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACAACGTATTTTg < 1:2096482/149‑1 (MQ=255) ttttCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACAACGTATTTTgg > 1:1195361/1‑150 (MQ=255) ccGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACAACGTATTTTGGATAc > 2:2104248/1‑150 (MQ=255) cGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACAACGTATTTTGGATACg > 2:5416710/1‑150 (MQ=255) | ATTTTGTCGGCCGTGGTATGTTTACGGGACACAGTCTATTACCAGCCTATGCGCTGGACTGGCATCATACTGTTTTTCGCGGGAATTGTGATGGTTCCCGCATACTCAGCAAAAAGAAAACCCGGAAAAGAGAAGTAATTCTCTTTTCCGGGTTTTTATGTTTATTATAATCTTCCCGCGCGAATATCGTCTGTCATTCCCTCATAAGGAGCCTTCGAAATCACTTCTTCGTTGTCGACTCCTTCATTTTTCAGAAATGTAATTTCCGCAAATTCAGGTACAACGTATTTTGGATACGT > CP006881/3350015‑3350313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |