| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,438,133 | T→A | 5.6% | I439K (ATA→AAA) | U712_17650 → | putative MFS‑type transporter yvkA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,438,133 | 0 | T | A | 5.6% | 1082.5 / 6.5 | 357 | I439K (ATA→AAA) | U712_17650 | putative MFS‑type transporter yvkA |
| Reads supporting (aligned to +/- strand): ref base T (211/109); new base A (2/34); total (214/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.86e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 361 total aligned reads displayed.
CTCGACCTTCCGTTATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCATGATGTTCTCCTTCATAAG > CP006881/3437984‑3438282 | ctcGACCTTCCGTTATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGAt > 1:1099498/1‑150 (MQ=255)ctcGACCTTCCGTTATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGAt < 2:4505922/150‑1 (MQ=255) cgtccTTCCGTTATTTCGGGAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGTTGTATCCATCATCGGCGTCTTTGTTTCATTGGGCATCAAATCTGTTGAAAAGGCANAGAAAg > 1:3704336/4‑150 (MQ=255) cGACCTTCCGTTATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAg > 2:3547435/1‑150 (MQ=255) gACCTTCCGTTATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGa > 1:8389/1‑150 (MQ=255) cTTCCGTTATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGaaaa > 1:4600419/1‑150 (MQ=255) cTTCCGTTATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGaaaa > 2:3244962/1‑150 (MQ=255) ttCCGTTATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGaaaaa < 2:1837093/150‑1 (MQ=255) ccGTTATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGaaaaaaa < 1:3853053/150‑1 (MQ=255) cGTTATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTGTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAAc > 1:4178847/1‑150 (MQ=255) tATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCa > 2:4233966/1‑150 (MQ=255) aTTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAg < 2:2784275/150‑1 (MQ=255) tttCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGc < 1:2511694/150‑1 (MQ=255) ggAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTaa > 2:113950/1‑150 (MQ=255) aGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAacac < 2:5453457/150‑1 (MQ=255) atcatTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACaaa > 1:432380/1‑150 (MQ=255) atcatTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTCTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACaaa > 1:547084/1‑150 (MQ=255) tcatTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACaaaa < 2:4375826/150‑1 (MQ=255) tcatTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTGTTTGTTTCATTGGGCATCAAATCTGATGAATCGGCACGGATAGAAAAAAAATCAGCGTAACACaaaa > 2:2422922/1‑150 (MQ=255) atTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACa < 2:3640964/150‑1 (MQ=255) ttCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGc > 2:2138783/1‑150 (MQ=255) ttCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCACCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGc < 2:645554/150‑1 (MQ=255) tcatcaGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGcc < 1:1377023/150‑1 (MQ=255) tcatcaGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTCTTTGTTTAATTGGGCATCAAATCTGATGAAACGGCACGGTAAGAAAAAAAATCAGCGTAacacaacacaagc > 1:5342169/1‑147 (MQ=255) catcaGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGccc > 2:285375/1‑150 (MQ=255) atcaGCCTTAATTGGCCTGATTTCGGGATATCTCACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTCTCATTGGGCATCAAATCTGATGAACCGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCg < 2:173549/150‑1 (MQ=255) atcaGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCg < 2:1346007/150‑1 (MQ=255) tcaGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCgg < 1:5035434/150‑1 (MQ=255) caGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGAATAGAAAAAAACTCAGCGTAACACAAAACAGCTCGgc > 1:2691188/1‑150 (MQ=255) gCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTCTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGgcat > 1:317493/1‑150 (MQ=255) ccTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGgcatc > 1:2460561/1‑150 (MQ=255) ccTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGgcatc < 2:5614781/150‑1 (MQ=255) cTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGgcatcg < 2:5773910/150‑1 (MQ=255) ttAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTGTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGgcatcgc > 2:403620/1‑150 (MQ=255) aaTTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGgcatcgcat > 1:3632396/1‑150 (MQ=255) aaTTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGACCGgcatcgcat > 1:5601883/1‑150 (MQ=255) aTTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGgcatcgcctc > 1:2614669/1‑150 (MQ=255) ttGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGcatca > 1:3373745/1‑150 (MQ=255) ggCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCatcatc < 2:1782277/150‑1 (MQ=255) ccTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCt > 2:5410656/1‑150 (MQ=255) ccTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCt < 1:3075948/150‑1 (MQ=255) ccTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCt > 1:3006664/1‑150 (MQ=255) cTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTg > 2:3009689/1‑150 (MQ=255) cTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTg > 1:751107/1‑150 (MQ=255) cTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTGTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGGCCGGCATCGCCTCATCCTg > 2:2694579/1‑150 (MQ=255) gATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCg < 1:5774164/150‑1 (MQ=255) aTTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCgg < 2:4431521/150‑1 (MQ=255) tttCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTGTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGt > 2:5132649/1‑150 (MQ=255) gggATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCg < 1:1918448/150‑1 (MQ=255) gggATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTATTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGACCGGCATCGCATCATCCTGCGGTGGCg > 1:4238375/1‑150 (MQ=255) taccacaCCCTCTTTCTGATTCTCTTCGCTGTATCCATCATCGGCTTTTTTGTTTCATTGGGCACCAAATCTGATGAATCGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCAACATCCTGCGGTGCCGG‑CCt < 2:316926/147‑1 (MQ=255) cacaCCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTCTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGACCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGcc > 2:3057472/1‑150 (MQ=255) acCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTCTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGGCCGGCATTGCATCATCCTCCGGGGCCGG‑GCTGCCttt > 1:4768649/1‑150 (MQ=255) tttATGATTCTCTTTGCTGTATCCATCATCGGCGTCTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATggt > 2:4761947/1‑148 (MQ=255) ttttgtttCTCTTTGCTGTATCCCTCAGGGGTGTTTTTGTTTCATTGGGCAACAAATCAGATGAAACGAGACGAATAGAAAAAAACCAAGCGAAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATc < 2:1986455/144‑1 (MQ=255) ttATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGACCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATc > 1:4915108/1‑150 (MQ=255) tATGTTTCTCTTTGCTGTATCCACCATCGGCTTTTTTGTTCCATTGGGCATCAAATCTGATGAAACGGCACGGAAAGAAAAAAACTCAGCGAAACACAAAACAGCCGGGCATCGCACCATCCTGCGGTGCCGG‑ACTGCCTTTTATGATcc < 1:5155729/150‑1 (MQ=255) tGATTCCCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCg < 2:1371458/150‑1 (MQ=255) gATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCCGCATCGCATTATCCTGCGGTGCCCG‑GCCGCCGTTTTTTGTCCCgc > 1:3466331/1‑149 (MQ=255) tctcTTTGCTGTATCCATCATCGGCGTCTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGACCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGc > 2:4584877/1‑150 (MQ=255) tctTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGTCCGGCATCGCATCATCCTGCGGGGCCGG‑GCTGGCGTTTATGGTccccccgcga > 1:1667073/1‑143 (MQ=255) tctTTGCTGTATCCATCATCGGCGTGTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCCCATCATCCTGCGGTGCCCG‑GCTGCCTTTTATGATCCCGAAGCGa > 1:2819302/1‑150 (MQ=255) ttttGTTGTATCCATCATCGGCTTTTTTTTTTCTTTGGGCATCAAATCTGAGGAAAGGGCAGGGATAAAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGAc < 1:197692/149‑1 (MQ=255) gCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGTCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGTTCCCGAAGCAACTGCt > 1:92906/1‑150 (MQ=255) tctATCCATCATGGGCGTTTTTTTTTCATTGCGAAACAAATGTGATGAAACGGCAGGAATAGAAAAATACCCAGCGTAACACAAAACCGCCCGGCATCGCATCATCCTGCGTTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTc < 2:3818096/148‑1 (MQ=255) catcatCGGCGTGTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCCTCCTGGGGTGCCGG‑GCTGCCTTTTATGATCCCCAAGCGACTGCTTCGTCTTc > 2:1474542/1‑150 (MQ=255) catcGGCGTTTTTTTTTTATTGCGCATCAAATCTGATGAAACGGCACGGATAAAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGGGGTGCCGG‑ACTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACg < 1:5334247/150‑1 (MQ=255) catcGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCCGAGCGACTGCTTCGTCTTCACg > 2:5268473/1‑150 (MQ=255) catcGGCGTCTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGGCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCC‑TTTATGATCCCGAAGCGACTGCTTCGTCTTCAcct > 1:130421/1‑148 (MQ=255) atcGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCCTCATCCTGCGGTGCCGG‑GGTGCCTTTTATGATCCCGAAGCGACTGGTTCGTCTTCACgg > 2:2585034/1‑150 (MQ=255) atcGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGACCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGGTTCGTCTTCACgg > 1:5548564/1‑150 (MQ=255) tgggCGTTTTTGTTTTATTGGCCATCAAATCTGATGAAACGGCACGGAAAAAAAAAAACTAAGCGTAACACAAAACAGCCCGCCATCGCATCATCCTGCGGTGCCGG‑TCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGt < 2:2562002/148‑1 (MQ=255) ggCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAAGGCCACGGATAGAAAAAAACACAGCTTAACACAATACAGCCCGGCATCGCATCACCCTGCGGTGCCGG‑CCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCa < 1:5266120/150‑1 (MQ=255) gTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATcc > 1:3942121/1‑150 (MQ=255) gTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATcc > 2:4638246/1‑150 (MQ=255) tttttGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGACCGGGATCGCATCATCCTGCGGTGCCGG‑GGTGCGTTTTATGATCCAGAAGCGACAGCTTCGTCTTTACGGTCATCCt > 1:4405000/1‑150 (MQ=255) ttttGTTTCATTGGGCAACAAATCTGATGAAACGGCACGGAAAGAAAAAAACTCAGCGTAACACAAACCAGCCCGGCATCGCACCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCtt < 2:2502890/150‑1 (MQ=255) tttGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCttt > 2:73989/1‑150 (MQ=255) gTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACg > 1:2270088/1‑150 (MQ=255) gTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACg > 2:2473726/1‑150 (MQ=255) ttGGGCATCAAATGTAATGAAAGCGCACGAAAAAAAAAAACCACAGCACACAAAAAAACCCCCCGCCTTCGCTCCATCTTGGGGTGCCGG‑CCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAgg < 1:963651/150‑1 (MQ=255) gggCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGACCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGAt > 2:5554893/1‑150 (MQ=255) aacAAATTTGATGAAACGGCACGGAAAGAAAAAACCTCAGCGTAACACAAAACAGCCCGGCACCGCATCATCCTGGGGTGCCGG‑CCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGccc < 1:4018689/148‑1 (MQ=255) atggtaagaAACGGCATGGAAAAAAAAAACCTCAGCAAAACACAAAACAGCCGGGCATGCCCCCATCGTGGGGTCCCGC‑TCTTCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTc < 2:3447208/143‑1 (MQ=255) tCTGATGAAACGGCAAGGAAAAAAAAAAACCCAGCGTAACACAAACCACCCCGGCACCGCATCATCCTGCGGTGCCGG‑CCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCa < 2:498182/150‑1 (MQ=255) tgatgaAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGGGACTGCTTCGTTTTCACGGTCATCCTTTAAGAAGAAGATGCCCAATTTatg > 1:1853401/1‑150 (MQ=255) gatgaAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCatga > 2:4868496/1‑150 (MQ=255) atgaAACGACAGGAATAGAAAAAAACACACGGTACCAAAAAACACCCGGGAATCCCATCACCTTCCGGTGCCGA‑TCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCatgat < 1:113952/150‑1 (MQ=255) tgaAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGACCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCatgatg > 1:3026516/1‑150 (MQ=255) taaaaCGGCACGGATAAAAAAAAACACAGCGAAACACAAAACACCCCGCCATCGCATCATCCTGCGGTGCCGG‑ACTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCatgatg < 2:3723296/148‑1 (MQ=255) aaaCGCCACAGAAAAAAAAAACCCCACCCTAACACAAAACAGCCCGGCACCGCATCTTCCTGCGGTGCCGG‑CCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCATGATGtt < 2:1900637/150‑1 (MQ=255) aaCGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCATGATGTtc > 2:920532/1‑150 (MQ=255) cGGCACGGAAAGAAAAAAACCCAGCGTAACACAAAACACCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCATGATGTtctc < 2:320747/150‑1 (MQ=255) ggCACGGATAGAAAAAAACTCAGCCTAACACAAAACGGCCCGGCATCGCATGATCCTGCCGTGCCCG‑GCTGCCTTGTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCATGATGTTCTcc > 1:3796821/1‑150 (MQ=255) gcaggaaTAGAAAAAAACCAACCGTAACAAAAAACAGCCCGGCATCCCATCATCCTGGGGTGCCGG‑TCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCATGATGTTCTCCt < 2:13042/144‑1 (MQ=255) gaagaaTAAAAAAAAACACAAGCAAACACAAAACCCCCCCCCAACGCTCCCTCCTTGGGGGCCGGTCCTTCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCATGATGTTCTCCt < 1:5813819/145‑1 (MQ=255) aCGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATTCTTTACGAAGAGGATGCCCAATTCATGATGTTCTCCTTc > 1:2005493/1‑150 (MQ=255) ggATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTACTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCATGATGTTCTCCTTCAt > 2:3934943/1‑150 (MQ=255) cgATAAAAAAAAACTCAGCGTACCACACAACAGCCAGCCATCGCTTCATCTTCCGGTGCCGG‑CCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCATGATGTTCTCCCTCAt < 1:4992020/149‑1 (MQ=255) aTAGAAAAAAACTCAGCGTAACACAAAACAGCACGACATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCATGATGTTCTCCTTCATaa > 1:5646266/1‑150 (MQ=255) | CTCGACCTTCCGTTATTTCGGAAGCATCATTTCATCAGCCTTAATTGGCCTGATTTCGGGATATCACACCCTATTTATGATTCTCTTTGCTGTATCCATCATCGGCGTTTTTGTTTCATTGGGCATCAAATCTGATGAAACGGCACGGATAGAAAAAAACTCAGCGTAACACAAAACAGCCCGGCATCGCATCATCCTGCGGTGCCGG‑GCTGCCTTTTATGATCCCGAAGCGACTGCTTCGTCTTCACGGTCATCCTTTACGAAGAGGATGCCCAATTCATGATGTTCTCCTTCATAAG > CP006881/3437984‑3438282 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |