New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 947028 =129 (0.920)17 (0.140) 10/168 14.1 12.4% intergenic (+9/‑201) ycaD/ycaM putative MFS transporter, inner membrane protein/putative transporter
?NC_000913 947064 = 129 (1.080)intergenic (+45/‑165) ycaD/ycaM putative MFS transporter, inner membrane protein/putative transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 130 total aligned reads displayed.

TTTATCATGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAAAAATAAAATGTGCA  >  NC_000913/946930‑947126
                                                                                                  |                                                                                                  
tttATCATGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCa                                                                                                    >  1:2131533/1‑99 (MQ=255)
tttATCATGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCa                                                                                                    >  1:2203643/1‑99 (MQ=255)
 ttATCATGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCaa                                                                                                   <  1:2004072/99‑1 (MQ=255)
 ttATCATGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCaa                                                                                                   <  1:1828828/99‑1 (MQ=255)
  tATCATGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAg                                                                                                  <  1:1476486/99‑1 (MQ=255)
      aTGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCaga                                                                                              >  2:1296109/1‑99 (MQ=255)
       tGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCagag                                                                                             >  1:1055351/1‑99 (MQ=255)
       tGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCagag                                                                                             >  2:2735872/1‑99 (MQ=255)
        gATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAgt                                                                                            <  2:911249/99‑1 (MQ=255)
        gATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACACCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAgt                                                                                            <  1:2376178/99‑1 (MQ=255)
         aTCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAgtg                                                                                           >  1:169229/1‑99 (MQ=255)
             ccAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGaa                                                                                       >  2:1428929/1‑99 (MQ=255)
              cAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAAc                                                                                      <  1:2882257/99‑1 (MQ=255)
              cAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAAc                                                                                      <  2:755588/99‑1 (MQ=255)
                 cGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTa                                                                                   >  1:576439/1‑99 (MQ=255)
                 cGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTa                                                                                   <  1:2651967/99‑1 (MQ=255)
                     tCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGt                                                                               <  1:1738753/99‑1 (MQ=255)
                       gTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGttt                                                                             <  1:2700317/99‑1 (MQ=255)
                       gTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGttt                                                                             >  2:210732/1‑99 (MQ=255)
                       gTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGttt                                                                             >  1:2102986/1‑99 (MQ=255)
                       gTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGttt                                                                             <  2:922065/99‑1 (MQ=255)
                         ttATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTca                                                                           <  1:1206568/99‑1 (MQ=255)
                         ttATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTca                                                                           <  1:343840/99‑1 (MQ=255)
                         ttATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTca                                                                           <  2:366524/99‑1 (MQ=255)
                           aTCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTcaca                                                                         >  2:3178075/1‑99 (MQ=255)
                           aTCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTcaca                                                                         <  2:1313886/99‑1 (MQ=255)
                            tCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTCCTGTTTCacac                                                                        >  2:2161600/1‑99 (MQ=255)
                              gagttGCGGATGCTGCTGCGCAACGCCGCTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACActc                                                                      <  2:2990997/96‑1 (MQ=255)
                               aTTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACActct                                                                     <  1:3014110/99‑1 (MQ=255)
                                    cTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCttt                                                                <  1:638447/99‑1 (MQ=255)
                                    cTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCttt                                                                >  1:2438699/1‑99 (MQ=255)
                                       aTGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCtttttt                                                             <  1:1347218/99‑1 (MQ=255)
                                       aTGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCtttttt                                                             <  1:1346057/99‑1 (MQ=255)
                                       aTGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCtttttt                                                             <  1:1346047/99‑1 (MQ=255)
                                       aTGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCtttttt                                                             <  1:1345928/99‑1 (MQ=255)
                                       aTGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCtttttt                                                             <  1:3049997/99‑1 (MQ=255)
                                       aTGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCtttttt                                                             <  2:2890991/99‑1 (MQ=255)
                                       aTGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCtttttt                                                             <  2:541330/99‑1 (MQ=255)
                                       aTGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCtttttt                                                             <  2:828838/99‑1 (MQ=255)
                                       aTGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCtttttt                                                             <  2:1180518/99‑1 (MQ=255)
                                        tgctgctgcCCAAAGCCCGGCAAAACCCGAAAACCCTTTCTCAACGGTTAAAGAATTTCAGCAGGGGGTGAACCTACTGTTTCACACTCTGCctttttt                                                            <  2:1666358/99‑2 (MQ=255)
                                         gctgctgcGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGt                                                           <  2:273653/99‑1 (MQ=255)
                                         gctgctgcGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGt                                                           >  1:1964808/1‑99 (MQ=255)
                                          ctgctgcGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGtt                                                          <  2:382835/99‑1 (MQ=255)
                                             ctgcGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTttct                                                       <  1:1056439/99‑1 (MQ=255)
                                              tggacAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTttctt                                                      <  2:3046188/95‑1 (MQ=255)
                                              tgcGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTttctt                                                      >  1:3189234/1‑99 (MQ=255)
                                              tgcGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTttctt                                                      <  1:3397315/99‑1 (MQ=255)
                                               gcgcAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTttcttc                                                     <  2:1427121/99‑1 (MQ=255)
                                                  cAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTAt                                                  <  1:1440101/99‑1 (MQ=255)
                                                  cAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTAt                                                  <  1:3167340/99‑1 (MQ=255)
                                                  cAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTAt                                                  <  1:1441642/99‑1 (MQ=255)
                                                  cAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTAt                                                  <  1:1709514/99‑1 (MQ=255)
                                                   aaCGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATc                                                 <  2:716248/99‑1 (MQ=255)
                                                      gCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTgc                                              >  2:1466157/1‑98 (MQ=255)
                                                      gCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGa                                              >  2:1466202/1‑99 (MQ=255)
                                                        cGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACt                                            >  2:2977919/1‑99 (MQ=255)
                                                         ggTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACtt                                           >  2:1675709/1‑99 (MQ=255)
                                                            cATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCt                                        >  1:602876/1‑99 (MQ=255)
                                                             aTACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCtt                                       <  1:1000914/99‑1 (MQ=255)
                                                               aCGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTa                                     <  1:554295/99‑1 (MQ=255)
                                                                cGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTAt                                    <  1:3309196/99‑1 (MQ=255)
                                                                cGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTAt                                    <  2:2939533/99‑1 (MQ=255)
                                                                 gCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTAtt                                   <  1:3393157/99‑1 (MQ=255)
                                                                 gCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTAtt                                   <  2:1235649/99‑1 (MQ=255)
                                                                  ccGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTc                                  >  1:3152280/1‑99 (MQ=255)
                                                                    gAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCa                                >  2:91613/1‑99 (MQ=255)
                                                                     aaaCCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCaa                               <  2:1231851/99‑1 (MQ=255)
                                                                     aaaCCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTATTTTGTTTCTTCTATCTGACTTGCTTTATTCCaa                               >  1:1881976/1‑99 (MQ=255)
                                                                      aaCCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCaaa                              <  2:2969087/99‑1 (MQ=255)
                                                                         ccGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAAttt                           <  2:2223101/99‑1 (MQ=255)
                                                                         ccGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGGTTCTTCTATCTGACTTGCTTTATTCCAAAttt                           >  2:2750885/1‑99 (MQ=255)
                                                                          cGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAAtttt                          >  1:3186215/1‑99 (MQ=255)
                                                                          cGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAAtttt                          >  2:2772779/1‑99 (MQ=255)
                                                                            ttGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTAt                        <  1:751927/99‑1 (MQ=255)
                                                                            ttGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTAt                        <  1:2167529/99‑1 (MQ=255)
                                                                             tGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTAtt                       <  1:2696603/99‑1 (MQ=255)
                                                                              gCTCACGTGTAGATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTc                      <  1:3258344/99‑1 (MQ=255)
                                                                              gCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTc                      <  2:2230691/99‑1 (MQ=255)
                                                                                tCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTCTTCGt                    >  2:3185395/1‑99 (MQ=255)
                                                                                  aCGTGTAGATGAATTCAAGCATAGTGTGAACTTACTGTTTCACACTCTGCTATTTTGTTTCTTCTATCTGGCTTTCGTTATTCCAAATTTTTTTCGttt                  >  2:285313/1‑99 (MQ=255)
                                                                                  aCGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGttt                  >  1:3197572/1‑99 (MQ=255)
                                                                                    gtgtAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTTTTTCTTTTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTaa                >  2:1469285/1‑99 (MQ=255)
                                                                                    gtgtAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTaa                >  2:1469286/1‑99 (MQ=255)
                                                                                    gtgtAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTaa                <  1:69220/99‑1 (MQ=255)
                                                                                      gtAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTaaaa              <  1:178767/99‑1 (MQ=255)
                                                                                       tAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTaaaaa             >  2:2132920/1‑99 (MQ=255)
                                                                                         aaTGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAaaaata           >  1:283199/1‑99 (MQ=255)
                                                                                         aaTGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAaaaata           >  2:352634/1‑99 (MQ=255)
                                                                                          aTGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTTTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAaaaataa          >  2:1956025/1‑99 (MQ=255)
                                                                                          aTGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAaaaataa          >  2:1958504/1‑99 (MQ=255)
                                                                                          aTGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAaaaataa          >  1:1984042/1‑99 (MQ=255)
                                                                                          aTGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAaaaataa          >  2:1307195/1‑99 (MQ=255)
                                                                                           tGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAaaaataaa         <  2:2396233/99‑1 (MQ=255)
                                                                                            gAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAaaaataaaa        <  1:3028088/99‑1 (MQ=255)
                                                                                              aTTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAAAAATAAAAtg      >  1:1649896/1‑99 (MQ=255)
                                                                                               ttCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAAAAATAAAAtgt     >  1:1382443/1‑99 (MQ=255)
                                                                                               ttCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAAAAATAAAAtgt     >  1:1848380/1‑99 (MQ=255)
                                                                                                tCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAAAAATAAAAtgtg    <  1:713790/99‑1 (MQ=255)
                                                                                                  aaGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTTTCTGACTTGCTTTATTCCCAATTTTATTCGTTTCAAAATAAAATGTgca  >  2:2488866/1‑99 (MQ=255)
                                                                                                  |                                                                                                  
TTTATCATGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTAAAAATAAAATGTGCA  >  NC_000913/946930‑947126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.