Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,640,551 IS1 (–) +9 bp intergenic (+9/‑383) yjjY → / → yjtD uncharacterized protein/putative methyltransferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)140 (1.000) 79/196 0.3 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4640551 = 0 (0.000)intergenic (+9/‑391) yjjY/yjtD uncharacterized protein/putative methyltransferase
* ? NC_000913 = 3584195NA (NA)149 (1.080) 82/194 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4640559 0 (0.000)intergenic (+17/‑383) yjjY/yjtD uncharacterized protein/putative methyltransferase

Only 100 of 285 total aligned reads displayed.

TAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGT  >  NC_000913/4640461‑4640657
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gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCg                                                                                                    <  2:781203‑M2/9‑1 (MQ=255)
gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCg                                                                                                    <  1:1824456‑M2/9‑1 (MQ=255)
 aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCgg                                                                                                   >  1:1243678‑M2/90‑99 (MQ=255)
 aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCgg                                                                                                   >  1:2976577‑M2/90‑99 (MQ=255)
 aGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGg                                                                                                   >  1:86484‑M2/1‑98 (MQ=255)
    ttGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggta                                                                                                <  1:1969220‑M2/99‑5 (MQ=255)
    aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcttacactaaatcagtaagttggcagcatcaccGAGGGGCCGGaca                                                                                                >  2:2595026‑M2/87‑99 (MQ=255)
     tGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaa                                                                                               >  1:341927‑M2/1‑94 (MQ=255)
      ggTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaat                                                                                              >  1:2519481‑M2/1‑93 (MQ=255)
         ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCaa                                                                                           <  1:561069‑M2/18‑1 (MQ=255)
         ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCaa                                                                                           <  2:2743620‑M2/18‑1 (MQ=255)
         ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCaa                                                                                           <  2:1403213‑M2/18‑1 (MQ=255)
         ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCaa                                                                                           <  1:1879475‑M2/18‑1 (MQ=255)
          gTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgact                                                                                          <  1:997868‑M2/99‑11 (MQ=255)
          gTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgact                                                                                          <  1:128302‑M2/99‑11 (MQ=255)
             agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATaaa                                                                                       <  1:2224629‑M2/22‑1 (MQ=255)
              gTACGTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATGCCAGGCTAAGAGGGGCCGggtaatgactccaa                                                                                      >  1:3240515‑M2/1‑85 (MQ=255)
               tACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGAGCCGggtaatgactccaac                                                                                     >  2:3139144‑M2/1‑84 (MQ=255)
               ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAAc                                                                                     >  1:247803‑M2/76‑99 (MQ=255)
                  tttCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaactta                                                                                  >  1:1458523‑M2/1‑81 (MQ=255)
                  atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTAc                                                                                  <  2:1446264‑M2/27‑1 (MQ=255)
                    tCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttatt                                                                                >  1:2873672‑M2/1‑79 (MQ=255)
                    tCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttatt                                                                                >  1:330121‑M2/1‑79 (MQ=255)
                     gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCt                                                                               <  2:16726‑M2/30‑1 (MQ=255)
                       aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTc                                                                             <  2:804844‑M2/32‑1 (MQ=255)
                        tCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgata                                                                            <  2:1769948‑M2/99‑25 (MQ=255)
                        acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCg                                                                            >  2:1874994‑M2/67‑99 (MQ=255)
                        acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCg                                                                            >  2:1621877‑M2/67‑99 (MQ=255)
                          aGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagt                                                                          <  2:3345825‑M2/99‑27 (MQ=255)
                           gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTg                                                                         >  1:783178‑M2/64‑99 (MQ=255)
                            aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGa                                                                        <  1:965634‑M2/37‑1 (MQ=255)
                             agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGAc                                                                       <  2:30106‑M2/38‑1 (MQ=255)
                               ccGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgtttt                                                                     >  2:2113064‑M2/1‑68 (MQ=255)
                                cGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgtttta                                                                    <  1:1647620‑M2/99‑33 (MQ=255)
                                cGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgtttt                                                                     >  2:838802‑M2/1‑67 (MQ=255)
                                   tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACatatat                                                                 >  1:2102189‑M2/56‑99 (MQ=255)
                                     gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCa                                                               >  2:3083296‑M2/54‑99 (MQ=255)
                                        tCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcaga                                                            <  1:2815476‑M2/99‑41 (MQ=255)
                                        cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGt                                                            >  2:3202362‑M2/51‑99 (MQ=255)
                                           ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCa                                                         >  1:2916558‑M2/48‑99 (MQ=255)
                                           aaaaCGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacgtattgatagtgttttatgttcagataa                                                         <  2:1812836‑M2/99‑44 (MQ=255)
                                            tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCaa                                                        >  1:2008770‑M2/47‑99 (MQ=255)
                                            aaaCGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataat                                                        <  2:593564‑M2/99‑45 (MQ=255)
                                            aaaCGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataat                                                        >  2:523448‑M2/1‑55 (MQ=255)
                                              aaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAAtt                                                      <  1:2938772‑M2/55‑1 (MQ=255)
                                                  cTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccga                                                  >  1:2252075‑M2/1‑49 (MQ=255)
                                                   tGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                 >  1:911227‑M2/1‑48 (MQ=255)
                                                    gTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                <  1:3377975‑M2/99‑53 (MQ=255)
                                                     tCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga                                               <  2:1145175‑M2/99‑54 (MQ=255)
                                                      catcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACg                                              >  2:653566‑M2/37‑99 (MQ=255)
                                                      catcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACg                                              <  1:3148434‑M2/63‑1 (MQ=255)
                                                       aTCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact                                             >  2:2650641‑M2/1‑44 (MQ=255)
                                                       aTCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact                                             >  1:1091063‑M2/1‑44 (MQ=255)
                                                        tCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt                                            <  2:1222475‑M2/99‑57 (MQ=255)
                                                        tCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt                                            <  1:3056567‑M2/99‑57 (MQ=255)
                                                          cTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                          >  1:2348571‑M2/1‑41 (MQ=255)
                                                            acactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACa                                        <  2:1052586‑M2/69‑1 (MQ=255)
                                                             aCCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                       <  1:17529‑M2/99‑62 (MQ=255)
                                                               cATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                     >  1:2403737‑M2/1‑36 (MQ=255)
                                                                taaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGttt                                    <  2:3236978‑M2/73‑1 (MQ=255)
                                                                aTTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                    >  2:1981978‑M2/1‑35 (MQ=255)
                                                                 aaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTtg                                   <  2:2439754‑M2/74‑1 (MQ=255)
                                                                  tttAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag                                  >  1:418108‑M2/1‑33 (MQ=255)
                                                                  aatcagtaagttggcagcatcaccGAGGGGTCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTtga                                  >  2:3187741‑M2/25‑99 (MQ=255)
                                                                   atcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTtgat                                 >  1:1003555‑M2/24‑99 (MQ=255)
                                                                   atcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTtgat                                 <  2:1945972‑M2/76‑1 (MQ=255)
                                                                     aaCAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                               >  1:1705723‑M2/1‑30 (MQ=255)
                                                                     aaCAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                               <  1:2806522‑M2/99‑70 (MQ=255)
                                                                      agtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGaa                              >  2:2486578‑M2/21‑99 (MQ=255)
                                                                      aCAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                              <  2:2199532‑M2/99‑71 (MQ=255)
                                                                       gtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGaaa                             <  1:1573763‑M2/80‑1 (MQ=255)
                                                                        taagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAat                            >  2:1095537‑M2/19‑99 (MQ=255)
                                                                        aGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                            <  2:2063592‑M2/99‑73 (MQ=255)
                                                                           gttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAatcat                         <  2:2480283‑M2/84‑1 (MQ=255)
                                                                           aaCATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga                         <  2:1117487‑M2/99‑76 (MQ=255)
                                                                            ttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAatcatc                        >  1:2598931‑M2/15‑99 (MQ=255)
                                                                            ttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAatcatc                        <  2:3019424‑M2/85‑1 (MQ=255)
                                                                            aCATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                        <  2:1159749‑M2/99‑77 (MQ=255)
                                                                             tggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCg                       <  1:1056436‑M2/86‑1 (MQ=255)
                                                                             cATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                       >  2:2343468‑M2/1‑22 (MQ=255)
                                                                             cATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                       >  2:1347941‑M2/1‑22 (MQ=255)
                                                                               tAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                     >  2:403066‑M2/1‑20 (MQ=255)
                                                                                 aCAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                   >  2:1440413‑M2/1‑18 (MQ=255)
                                                                                  cAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag                  <  1:2692815‑M2/99‑83 (MQ=255)
                                                                                   catcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTa                 >  2:2547203‑M2/8‑99 (MQ=255)
                                                                                    ggCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa                >  2:216047‑M2/1‑15 (MQ=255)
                                                                                    atcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTaa                >  1:2760942‑M2/7‑99 (MQ=255)
                                                                                     tcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTaaa               >  2:920723‑M2/6‑99 (MQ=255)
                                                                                      caccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAAt              <  1:812946‑M2/95‑1 (MQ=255)
                                                                                       tAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacga             <  2:855580‑M2/99‑88 (MQ=255)
                                                                                        aaGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac            <  2:1598265‑M2/99‑89 (MQ=255)
                                                                                              ggCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCtt      >  1:2967105/1‑99 (MQ=255)
                                                                                                ccGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt    <  2:2968549‑M2/99‑97 (MQ=255)
                                                                                                ccGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTc    <  2:2906314/99‑1 (MQ=255)
                                                                                                 cGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCg   >  2:1474638/1‑99 (MQ=255)
                                                                                                  gggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgccgctccaccgattttgagaacgacagcgacttcc  <  2:2988109‑M2/99‑99 (MQ=255)
                                                                                                  gggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc  <  2:363855‑M2/99‑99 (MQ=255)
                                                                                                  gggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc  <  2:2293866‑M2/99‑99 (MQ=255)
                                                                                                  gggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc  >  1:2136165‑M2/1‑1 (MQ=255)
                                                                                                  ggACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGt  <  2:2096685/99‑1 (MQ=255)
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TAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGT  >  NC_000913/4640461‑4640657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.