| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4527506 = | 243 (0.990) | 4 (0.020) | 3/258 | NT | 1.7% | coding (32/633 nt) | sgcE | putative epimerase |
| ? | NC_000913 | 4527570 = | 229 (1.010) | coding (411/432 nt) | sgcA | putative phosphotransferase enzyme IIA component | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCACATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4527662‑4527506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcaaaCAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCACTCCTCGT > NC_000913/4527570‑4527718 GCACATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCA < 1:1676998/150‑1GCACATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCA < 2:2256322/150‑1GCACATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCA > 1:2602571/1‑150GCACATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCA < 2:2256325/150‑1 ACATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGC > 1:203734/1‑150 CATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCG > 1:3475388/1‑150 CATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCG > 1:3475368/1‑150 ATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCGC < 1:2308736/150‑1 ATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCGC > 2:2187975/1‑150 ATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCGCAA > 1:1501719/1‑150 ATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCGCAA < 2:2113762/150‑1 ATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCGCAA < 2:2113905/150‑1 TTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCGCAAA > 1:559593/1‑150 ACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGTTCCTGCACCCTTCTCTCGGCAGCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCGACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTC > 2:1985395/1‑150 TTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAA > 2:3180446/1‑150 TTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAAT > 2:2616039/1‑117 TTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAAT < 1:2616039/117‑1 CAGCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTTAGCGTTGTGGCGAATCAATAAACTGGCAGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCCGCCAGACGGGGTCGCA > 2:723645/1‑150 CAGCGCAAACAGTGCATCGTCTGTGCTGGAATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCA > 2:1055823/1‑150 CAGCGCAAACAGTGCATCGTCTGGGCTGGCATTTCCCACTGACGTTAAGCGTAGTGGATAATAAATAAACTGGCTGATTCGCTGAATGGTCACAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAATCAGCCACACGGGGTCGCA > 2:3799584/1‑150 AGCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCAC > 2:815264/1‑150 AGCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCAC > 2:1627445/1‑150 AGCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCAC > 1:3370050/1‑150 AGCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCAC > 1:3370040/1‑150 GCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCACT > 1:3987854/1‑150 GCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCACT > 1:3987788/1‑150 GCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCACT > 2:4083125/1‑150 GCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCACT > 2:483765/1‑150 GCGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCACT > 1:2670074/1‑150 CGCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCACTC < 2:2996194/150‑1 GCAAACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCACTCC > 1:3970716/1‑150 ACAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCACTCCTCGT > 2:4003321/1‑150 GCACATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAACGGAGGCGCTTATGATCCTGCACCCTTCTCTCGCCAGCGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4527662‑4527506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcaaaCAGTGCATCGTCTGTGCTGGCATTTCCCACTGCCGTTAAGCGTTGTGGCGAATCAATAAACTGGCTGATGCGCTGAATGGTCAAAATATGTGCGTTGGCATCCGTGGCGCTGACGCAGAGAAGCAGCCAGACGGGGTCGCACTCCTCGT > NC_000913/4527570‑4527718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |