Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 4,640,551 IS1 (–) +9 bp 100% intergenic (+9/‑383) yjjY → / → yjtD uncharacterized protein/putative methyltransferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)223 (1.160) 109/278 NT 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4640551 = 0 (0.000)intergenic (+9/‑391) yjjY/yjtD uncharacterized protein/putative methyltransferase
* ? NC_000913 = 3584195NA (NA)263 (1.380) 110/276 NT 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4640559 0 (0.000)intergenic (+17/‑383) yjjY/yjtD uncharacterized protein/putative methyltransferase

Only 100 of 524 total aligned reads displayed.

ATGACTAAAGTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAA  >  NC_000913/4640402‑4640699
                                                                                                                                                     |                                                                                                                                                    
aTGACTAAAGTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAag                                                                                                                                                      >  2:466331/1‑150 (MQ=255)
 gagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGa                                                                                                                                                     <  2:3063572‑M2/2‑1 (MQ=255)
     tAAAGTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAgggg                                                                                                                                                 >  1:327166/1‑150 (MQ=255)
        cgcttatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtatgttggcagcatcaccGAGGGGCCg                                                                                                                                              <  1:373135‑M2/9‑1 (MQ=255)
         gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCgg                                                                                                                                             >  1:1116751‑M2/141‑150 (MQ=255)
         gTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGg                                                                                                                                             >  2:1655683‑M2/1‑149 (MQ=255)
         gTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGg                                                                                                                                             <  2:1576265‑M2/150‑2 (MQ=255)
          tACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGgg                                                                                                                                            >  2:1820926‑M2/1‑148 (MQ=255)
          tACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGgg                                                                                                                                            <  1:788191‑M2/150‑3 (MQ=255)
           tgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCAGac                                                                                                                                           <  1:3126799‑M2/12‑1 (MQ=255)
             gTAATTGCGTTCTTGTTGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaa                                                                                                                                         >  1:2120842‑M2/1‑145 (MQ=255)
             gTAATGGCGTTCTTGATGCACTTTCAATCAACTTCAACAACATCATTTGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaa                                                                                                                                         >  1:2909524‑M2/1‑145 (MQ=255)
             gTAAGTGCGTTCTTGATGCACTTTCCAACAACGTCAACAAAATCATTAGCTGGGTCGTGGGTACTTACCCTCCGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaa                                                                                                                                         >  1:1151981‑M2/1‑145 (MQ=255)
             atgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGacac                                                                                                                                         <  2:3024927‑M2/14‑1 (MQ=255)
              tgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACAcc                                                                                                                                        <  2:418611‑M2/15‑1 (MQ=255)
                 ttGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgac                                                                                                                                     >  2:2204138‑M2/1‑141 (MQ=255)
                    cGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactcc                                                                                                                                  <  2:1919652‑M2/150‑13 (MQ=255)
                     cggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggccagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATaaa                                                                                                                                 >  2:3169772‑M2/129‑150 (MQ=255)
                         gcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTa                                                                                                                             >  2:513760‑M2/125‑150 (MQ=255)
                          cttttgccgttacgcaccaccccgtcagtagctgaacaggagggactgctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTAc                                                                                                                            <  2:854013‑M2/27‑1 (MQ=255)
                          cttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTAc                                                                                                                            <  1:2439393‑M2/27‑1 (MQ=255)
                           ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACg                                                                                                                           >  2:343532‑M2/123‑150 (MQ=255)
                                aCTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccgacttattgata                                                                                                                      >  1:2542267‑M2/1‑126 (MQ=255)
                                aCTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgata                                                                                                                      <  2:2017487‑M2/150‑25 (MQ=255)
                                aCTGTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgata                                                                                                                      >  2:2147530‑M2/1‑126 (MQ=255)
                                     ccATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgtt                                                                                                                 >  2:1604069‑M2/1‑121 (MQ=255)
                                     actcaccaccccgtcagtagctgaacagcaggcccagctgatagacacagaagccactggagcacctcaaaaacaccatcatacactaaatcaggaagttggcagcatcaccGACGGGCCGGACCCCCAATAAAACTCCGCTTCGTGGAc                                                                                                                 >  1:1162714‑M2/113‑150 (MQ=255)
                                        tCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgtttta                                                                                                              <  1:1000355‑M2/150‑33 (MQ=255)
                                        caccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACata                                                                                                              >  1:1682901‑M2/110‑150 (MQ=255)
                                          ccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACatata                                                                                                            <  1:522463‑M2/43‑1 (MQ=255)
                                          aaCGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatg                                                                                                            <  1:2051362‑M2/150‑35 (MQ=255)
                                             gTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttc                                                                                                         >  2:2575091‑M2/1‑113 (MQ=255)
                                              cccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCaa                                                                                                        <  2:1195850‑M2/47‑1 (MQ=255)
                                               ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAg                                                                                                       >  1:3142676‑M2/103‑150 (MQ=255)
                                                     gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAAt                                                                                                 <  1:878538‑M2/54‑1 (MQ=255)
                                                         ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTa                                                                                             <  2:2967448‑M2/58‑1 (MQ=255)
                                                          ttAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccga                                                                                            >  2:671811‑M2/1‑100 (MQ=255)
                                                             acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcactaacttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCAc                                                                                         <  1:2798839‑M2/62‑1 (MQ=255)
                                                                 ggTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                     >  1:1285265‑M2/1‑93 (MQ=255)
                                                                 ggTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                     >  2:721474‑M2/1‑93 (MQ=255)
                                                                  agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTaa                                                                                    >  1:2311097‑M2/84‑150 (MQ=255)
                                                                    cGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                                                                  >  2:1131544‑M2/1‑90 (MQ=255)
                                                                      tGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                                                                <  1:2958248‑M2/150‑63 (MQ=255)
                                                                       gggTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                               >  1:3188178‑M2/1‑87 (MQ=255)
                                                                        ggTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                                                              >  2:1955403‑M2/1‑86 (MQ=255)
                                                                         gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTtg                                                                             >  1:1998873‑M2/77‑150 (MQ=255)
                                                                         gTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca                                                                             >  1:236492‑M2/1‑85 (MQ=255)
                                                                         gTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca                                                                             <  1:549533‑M2/150‑66 (MQ=255)
                                                                           tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTtgat                                                                           <  1:2188225‑M2/76‑1 (MQ=255)
                                                                           aCTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                                                           >  1:2735490‑M2/1‑83 (MQ=255)
                                                                               tCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca                                                                       <  2:778616‑M2/150‑72 (MQ=255)
                                                                                gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAgg                                                                                                                                                   <  2:2821851‑M2/4‑1 (MQ=255)
                                                                                gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAgg                                                                                                                                                   >  1:2821851‑M2/70‑73 (MQ=255)
                                                                                cccTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                      >  2:2277765‑M2/1‑78 (MQ=255)
                                                                                  aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAatca                                                                    >  1:634406‑M2/68‑150 (MQ=255)
                                                                                   acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAatcat                                                                   >  2:2425878‑M2/67‑150 (MQ=255)
                                                                                    cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAatcatc                                                                  <  2:1281780‑M2/85‑1 (MQ=255)
                                                                                      gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGt                                                                >  2:930694‑M2/64‑150 (MQ=255)
                                                                                       gACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                               <  1:401574‑M2/150‑80 (MQ=255)
                                                                                        aCCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                              >  1:1383165‑M2/1‑70 (MQ=255)
                                                                                         gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATc                                                             <  2:2986524‑M2/90‑1 (MQ=255)
                                                                                         gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATc                                                             >  2:1453418‑M2/61‑150 (MQ=255)
                                                                                         gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATc                                                             <  2:563631‑M2/90‑1 (MQ=255)
                                                                                         gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTAGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATc                                                             >  2:2702725‑M2/61‑150 (MQ=255)
                                                                                           cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTa                                                           >  1:1046840‑M2/59‑150 (MQ=255)
                                                                                           cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTa                                                           >  2:1299157‑M2/59‑150 (MQ=255)
                                                                                                 tgtCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                                     <  2:978119‑M2/150‑90 (MQ=255)
                                                                                                   tCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttttcatgcagctccaccgattttgagaacgacagc                                                   <  2:1052954‑M2/150‑92 (MQ=255)
                                                                                                   tCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                   >  1:1794474‑M2/1‑59 (MQ=255)
                                                                                                   tCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgagagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgagtttgagaacgacagc                                                   <  2:2300241‑M2/150‑92 (MQ=255)
                                                                                                     aaaaaCGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga                                                 <  2:2352542‑M2/150‑94 (MQ=255)
                                                                                                     aaaaaCGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttggcatgcagctccaccgattttgagaacgacagcga                                                 <  1:2391464‑M2/150‑94 (MQ=255)
                                                                                                       tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCttt                                               >  1:1952975‑M2/47‑150 (MQ=255)
                                                                                                       tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCttt                                               >  2:1242114‑M2/47‑150 (MQ=255)
                                                                                                         aaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCg                                             >  2:2746663‑M2/45‑150 (MQ=255)
                                                                                                          aaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGt                                            >  1:3112239‑M2/44‑150 (MQ=255)
                                                                                                            aacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTca                                          >  2:1072109‑M2/42‑150 (MQ=255)
                                                                                                                 cATCCTAACCATTTTAACAGCAACATAACAGGCTAAGTGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccag                                     >  1:484220‑M2/1‑45 (MQ=255)
                                                                                                                  atcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACattat                                    >  2:1859632‑M2/36‑150 (MQ=255)
                                                                                                                     cTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                                 <  2:1374524‑M2/150‑110 (MQ=255)
                                                                                                                         actaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTtaata                             >  1:696123‑M2/29‑150 (MQ=255)
                                                                                                                          cATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccag                            <  2:622184‑M2/150‑115 (MQ=255)
                                                                                                                            ttttAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                          <  1:2216566‑M2/150‑117 (MQ=255)
                                                                                                                             aatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATcc                         <  1:303538‑M2/126‑1 (MQ=255)
                                                                                                                              ttAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc                        >  1:759629‑M2/1‑32 (MQ=255)
                                                                                                                                aaCAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctg                      >  2:1115638‑M2/1‑30 (MQ=255)
                                                                                                                                 aCAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc                     >  2:2870838‑M2/1‑29 (MQ=255)
                                                                                                                                   aGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                   <  1:1437479‑M2/150‑124 (MQ=255)
                                                                                                                                    gCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgattgtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                  >  1:821278‑M2/1‑26 (MQ=255)
                                                                                                                                     agttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGtt                 <  1:157741‑M2/134‑1 (MQ=255)
                                                                                                                                       aCATAACACCCTAAGAGGGGCCGggtaatgactcaaacttattgatagtgttttatgttcagaaaatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga               >  2:1524360‑M2/1‑23 (MQ=255)
                                                                                                                                         ggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGcat             <  2:1725245‑M2/138‑1 (MQ=255)
                                                                                                                                          tAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattc            <  2:2487339‑M2/150‑131 (MQ=255)
                                                                                                                                           aaCAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca           >  1:921578‑M2/1‑19 (MQ=255)
                                                                                                                                           aaCAGGCTAAGACGCGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttagagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca           <  1:2496741‑M2/150‑132 (MQ=255)
                                                                                                                                            aCAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag          >  1:942526‑M2/1‑18 (MQ=255)
                                                                                                                                             gcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATa         >  1:2609230‑M2/9‑150 (MQ=255)
                                                                                                                                                gCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtta      >  2:2108470‑M2/1‑14 (MQ=255)
                                                                                                                                                  tAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatg    <  2:492743‑M2/150‑139 (MQ=255)
                                                                                                                                                    cGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTaa  <  1:1833198‑M2/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
ATGACTAAAGTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAA  >  NC_000913/4640402‑4640699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.