| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,229,177 | A→C | 17.3% | intergenic (+112/+261) | yohP → / ← dusC | uncharacterized protein/tRNA‑dihydrouridine synthase C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,229,177 | 0 | A | C | 17.3% | 171.0 / 2.7 | 104 | intergenic (+112/+261) | yohP/dusC | uncharacterized protein/tRNA‑dihydrouridine synthase C |
| Reads supporting (aligned to +/- strand): ref base A (22/50); new base C (14/3); total (39/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.71e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 106 total aligned reads displayed.
TACTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCC > NC_000913/2229028‑2229323 | tACTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCa > 2:679910/1‑150 (MQ=255) cTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGACTATTTCAGGCTCTCATCGTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCTCTGGCGCATGGCGCGC‑GCg‑gg > 1:795615/1‑150 (MQ=255) cTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCC‑gg > 1:1678253/1‑150 (MQ=255) cTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑gg < 2:2224477/150‑1 (MQ=255) cTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑gg > 1:1834195/1‑150 (MQ=255) tggtggTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑ggg < 1:3197651/150‑1 (MQ=255) tggtggTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCAGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTTCATTGCTTCATATAATCACTGGCGCAATGAGCGC‑GCA‑ggg < 1:3008341/150‑1 (MQ=255) tggtggTGACTGGAGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑ggg < 1:3008314/150‑1 (MQ=255) ggtggtGACTGTCGTATTTAAGATTATATTTTAATATTAATTAATGTCATCAGGTCCGAAAATAAAGAGAATATTTCTGTCTCTCATCCTTTTGCGCTCCTGTCATGTGCATTGCTTAATATAATCACTGGCGCAAGGAGCGC‑GCA‑gggg < 1:2079931/150‑1 (MQ=255) gtggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑ggggg > 2:1281629/1‑150 (MQ=255) tggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GGC‑gggggg > 1:36455/1‑149 (MQ=255) tggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCC‑gggggg > 2:2257573/1‑149 (MQ=255) tggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCAGCCTGTTGCGCTCCTGTCATGTGCCTTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GGC‑gggggg > 1:313216/1‑149 (MQ=255) tgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GGC‑GGGgggggc > 2:907760/1‑150 (MQ=255) tgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCC‑GGGggcggc > 2:1091436/1‑150 (MQ=255) aCTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCC‑GGGGGGGGccc > 2:708930/1‑149 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGGTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAAt > 2:2929369/1‑150 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCC‑GGGGGCGGcccaa > 2:2886203/1‑147 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCaaa > 2:187205/1‑149 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑CGGGGGGGCCaaa > 2:2886219/1‑149 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGAGC‑GCC‑GGGGGCGGcccaa > 2:2886211/1‑147 (MQ=255) gCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGGGGCCAAtag > 1:510479/1‑148 (MQ=255) cGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGcccaaccc > 2:2097242/1‑144 (MQ=255) cGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAAAcgc > 2:2938550/1‑150 (MQ=255) gTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGGCGCCAAAcgcc > 2:810651/1‑150 (MQ=255) aaGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGGGGCCAATCgccgccgcc > 2:2382552/1‑150 (MQ=255) aaGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCgccgccgcc < 1:2617440/150‑1 (MQ=255) gatgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GGA‑GGGGGCGGGCAAACGCCGCCGcccc > 2:2890375/1‑150 (MQ=255) gatgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGcccc < 2:1899816/150‑1 (MQ=255) tgatATGTTCAAATTCATTCATGTCATCAGGTCCGAAAATAACGAGAAGAGGTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCt < 2:297601/150‑1 (MQ=37) gatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GGAGGGGGGGGGCCAAAccccccccccccag > 2:578980/1‑148 (MQ=255) gatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCCGCCAAAAGCccccccccccag > 2:460948/1‑148 (MQ=39) ttttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCC‑GGGGGGGGGCCAACCCCCccgccccccgcccc > 1:1833785/1‑150 (MQ=255) tAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAATGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCAccccc < 2:2945228/150‑1 (MQ=255) aaaTTAATTATTGTCATCTGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCGGTCATGTGATTTGCTTCATATAATCACTGGCGCATGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCgg < 2:655750/150‑1 (MQ=37) aaaTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGCG‑GGGGGGGGCCAA‑CGCCCCCCCCCCCCCCAccccccc > 1:1404991/1‑148 (MQ=38) aaaTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GGG‑GGGGGGGGGCAAAACCCCCCCCCCCCAGCcccccccc > 1:2828995/1‑148 (MQ=255) taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GGA‑GGGGGCGGGCCAAAGccccccccccccccccccccccgcgc > 1:1953334/1‑144 (MQ=255) taattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCC‑GGGGGGGGGCAAAAGCCCCCCCCCCCCCCAcccccccgcgc > 1:1084954/1‑144 (MQ=37) aattaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGctct < 2:2749360/150‑1 (MQ=255) tGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGaa < 2:1795902/150‑1 (MQ=255) tGTCATCAGGTCCGAAAATAACGAGAATATTTAAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGAATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGaa < 2:111927/150‑1 (MQ=255) ggTCAGCAGGTCCGACACTCACGAGAATCTTTCAGGCGCTCATCCTGGTGCGCTCCTGTCAGGTGCATTGCTTCATATACTCACGGGCGCAAGGCGCGC‑GCA‑GGGGGCGGCCCATCGCCGCCGCCCCCTGCACCCCCGGGCTCGGGCGaa < 2:6104/149‑1 (MQ=21) tcatcaGGTCCGAAAATAACGAGAATATTTCAGTGTCTGATCCTGTTGCGGTCCTGTCATGTGCATTGCTTCATATATTCACTGGCGCAAGGAGCGC‑GGG‑GGGGGGGGGGAATTGGCGGCGGCCCCGGGACCCCCGGGGTGTgggggacg > 2:2901954/1‑144 (MQ=255) aGGTCCGAAAATAACGAGAATATTTCAGTCGCTCAGCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCC‑GGGGGCGGCCCAACCCCCCCCCCCCCCGCCCCCCCCCGCCCCGGCGCACcaaaac > 2:2594189/1‑148 (MQ=255) gTCCTAAAATAACGTTAATTTTTCTGTCTCTCATCTTGTTGCGATCCTGTCTTGTGCTTTGATTCATATAATCAGTGGCGCACGGCGCGC‑GCT‑GGGGGCGGCAAAGCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATcgc < 1:28477/150‑1 (MQ=18) gTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCC‑GGGGGCCGCCCAACCCCGCCCCCCCCCCCCCCCCCCCGCCCGGGCGCaaaaaaaagc > 2:2325276/1‑146 (MQ=25) gTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCATTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGATCAAAATcgc < 2:2917496/150‑1 (MQ=255) gTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATcgc < 2:729505/150‑1 (MQ=255) tCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATcgcc < 2:2292781/150‑1 (MQ=255) tAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGcgcg < 2:2119779/150‑1 (MQ=255) agaCTATTTCAGTCTCTCAGCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑CGGGGCGGCCCATCGCCCCCCCCCCCGGCACCCCCCGGCTCAGGCGCCCCAAAACGCCGCCGCGCGGTGcc > 2:535021/1‑150 (MQ=21) ttttCCGTCTCTAATCCTGTGGCGCTCCTGTCTGGTGATTTGCTTCTTATAATCACGGGCGCACGGCGCGC‑GCG‑GGGGGGGGCCAACCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCgg < 1:3226726/149‑1 (MQ=17) ttttCCGTCTCAAATCCTGTGGCGCCCCGGTCTTGTGAATTGCTTAATATAATCACTGGCGCATGGCGCGC‑GCT‑GGGGGCGGCCATGCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCgg < 1:3226755/149‑1 (MQ=17) ttCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAAAACCCCCCCCCCCCACCACCCCCCCGCACAGGCGAAAAAAAAACACCCAGCGCGGTGCCCACGGca > 2:488180/1‑149 (MQ=16) aGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑CGGGGCGGCCAAACCCCCCCCCCCCCACCACCCCCCGGCACAGGCGAACAAAAAAGCCCCGGCCCGGTGCCCTCGGCGTAt > 2:1842516/1‑150 (MQ=18) tctctcATCCTGTTGGGCTCCTGTCTTGTGATTTGCTTCATATAATCCCTGGCGCAAGGTGCGC‑GCT‑GGGGGCGGCCACTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATcc < 1:161041/150‑1 (MQ=17) ctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCtt < 2:2037512/150‑1 (MQ=255) tcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa < 2:811431/150‑1 (MQ=255) aTCCTGTTGCGCTCTTGTCTTGTGATTTGCTTAATATAATCACGGGCGCAGGGCGCGC‑GCT‑GGGGGGGCCAAATCCCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACg < 1:1138599/150‑1 (MQ=17) tGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCCAACGCCGCCCCCCCCAGCACCCCCCGGCGCAGGCGAACAAAAAAGCCCCGGCGCGGTGCCCACCGCGTAACCCGTAAGGcaa > 2:2409722/1‑148 (MQ=17) gggcTCGTGTCTTGTGCATTGCTTCATTTAATCACTGGCGCATGGAGCGC‑GCG‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCgg < 1:1528780/148‑1 (MQ=17) gcgcTCCTGTCTTGTGCTTTGATTCATATAATCACTGGCGCATGGCGCGC‑GCT‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCgg < 1:2025497/150‑1 (MQ=17) gcgcTCCTGTCATGTGCATTGCTTCATATAATCCCTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCgg < 2:2575553/150‑1 (MQ=255) gcgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCgg < 2:2575381/150‑1 (MQ=255) gcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAAACGTCGCCGCCCCCAGCCCCCCCGGGCGCTGGCCAACAAAATCGCCGCGGCGCGGTGCCCGCGGCATATCCCCTACCGCTACCCGGt > 2:2853397/1‑150 (MQ=17) cTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTc < 2:1914242/150‑1 (MQ=255) cTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGGGGCCAAAAGCCGCCGCCCCCAGCACCCCCCGGCGCAGGCGAACAAAAACCCCCCGGCGCGGTGCCCACCGCTTATCCCATAACGCAACCCCGTCggg > 2:3197422/1‑150 (MQ=17) cTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCggg < 2:1461583/150‑1 (MQ=255) tGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATAGCCGCCGCCCCCTGCTCCCCCGGGCTCTGGCGAACAAAATCGCCGGTGCGCGGTGCGCTCGGCTTATCCCTTTCGGCTACCGGGTCgggg > 2:2421618/1‑149 (MQ=17) cATGTGCATTGCTTCATATAATCACTGGCGCACGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGcgcg < 2:1458061/150‑1 (MQ=255) aTGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGGGGCCAATAGCCGGCGCCCCCAGGACCCCCGGGGTCTTTCGAACAAAATCGCCGCTTCGCGGTTCCCTCGGCTTATACCTTAAGGCTACCGGGTCggggggga > 2:1873881/1‑145 (MQ=17) tgtgCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAg < 2:1546650/150‑1 (MQ=255) tgtgCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAg < 2:315740/150‑1 (MQ=255) tgctttgcttCATATAATCACTGGCGCAAGGAGCGC‑GCC‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGt < 2:1414303/150‑1 (MQ=255) gCATTGCTTCATATAATCAGTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTa < 2:2105750/150‑1 (MQ=255) gCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTa < 2:2034768/150‑1 (MQ=255) cATTGCTTCATATAACCCCTGGCGCAAGGAGCGC‑GCC‑GGGGGCGGCCAACCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTaa < 1:1200639/150‑1 (MQ=255) tGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCT‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACAt < 1:708930/150‑1 (MQ=255) ctacATATAATCACTGGCGCATGGAGCGC‑GCA‑GGGGGCGGCCACTCGCCGCCGCGCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTATCATcc < 1:1932036/147‑1 (MQ=11) ctacATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAAACGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATcc < 1:2901954/147‑1 (MQ=255) cTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATcc < 2:1625754/150‑1 (MQ=40) cTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATcc < 2:1272712/150‑1 (MQ=40) tCATATACTCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCACTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt < 2:2828875/150‑1 (MQ=255) tCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt < 1:506418/150‑1 (MQ=39) tCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt < 1:2169783/150‑1 (MQ=39) tCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt < 1:1389020/150‑1 (MQ=39) tCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt < 2:2801809/150‑1 (MQ=39) aaTCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTaaaa < 1:2284784/150‑1 (MQ=34) aTCACTGGCGCACGGAGCGC‑GCC‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAc < 2:1456369/150‑1 (MQ=18) aTCACTGGCGCAAGGAGCGC‑GCT‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATTCCTGTAAAAc < 1:1091436/150‑1 (MQ=18) aTCACTGGCGCAAGGAGCGC‑GCT‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATTCCTGTAAAAc < 1:907760/150‑1 (MQ=18) cACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAcgc < 1:454812/150‑1 (MQ=32) cTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACgcgc < 2:647041/150‑1 (MQ=32) aaGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGc < 1:126968/150‑1 (MQ=32) aaGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGc < 2:1794874/150‑1 (MQ=32) ggAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGccc < 2:434177/150‑1 (MQ=32) gAGCGC‑GCT‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCca < 1:3045943/150‑1 (MQ=17) gAGCGC‑GCG‑GGGTGCGGCCTATCGCCGCCGCCCCCTGCACCCCCGGGCTATGGCGAACTAAATAGCCGCTGCGCGGTGCCGTCGGCTTATCCCTTACGGCTACGGGGTCGGGCGCGAGGTAACTTCCCTGTAATACGAGCGCTCAGccga < 1:2473212/150‑3 (MQ=11) c‑gcA‑GGGGGCGGCAAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACAtgg < 2:1404991/150‑3 (MQ=17) | TACTGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCA‑GGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCC > NC_000913/2229028‑2229323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |