Predicted mutation
evidence seq id position mutation freq annotation gene description
JC NC_000913 4,183,399 Δ3 bp 85.0% coding (2155‑2157/4029 nt) rpoB → RNA polymerase, beta subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 418339873 (0.210)400 (1.160) 153/278 NT 85.0% coding (2154/4029 nt) rpoB RNA polymerase, beta subunit
?NC_000913 4183402 = 68 (0.200)coding (2158/4029 nt) rpoB RNA polymerase, beta subunit

Only 100 of 501 total aligned reads displayed.

CCGTTCCTGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCAAATACACCCGTTCTAACCAGAACACCTGTATCAACCAGAT  >  NC_000913/4183249‑4183547
                                                                                                                                                     |                                                                                                                                                     
  gTTCCTGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcg                                                                                                                                                     >  2:1035356‑M1/1‑148 (MQ=255)
    tCCTGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtg                                                                                                                                                   <  2:1550370‑M1/150‑5 (MQ=255)
    tCCTGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtg                                                                                                                                                   <  1:2206461‑M1/150‑5 (MQ=255)
    tCCTGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtg                                                                                                                                                   <  1:2045222‑M1/150‑5 (MQ=255)
      cTGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggt                                                                                                                                                 <  1:4991164‑M1/150‑7 (MQ=255)
       tGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGACCGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACgtg                                                                                                                                                >  2:1860153/1‑150 (MQ=255)
       tGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtg                                                                                                                                                <  2:5630594‑M1/150‑8 (MQ=255)
       tGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtg                                                                                                                                                <  1:2704262‑M1/150‑8 (MQ=255)
            cacGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtc                                                                                                                                           <  2:5167630‑M1/150‑13 (MQ=255)
            cacGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACgtggtggt                                                                                                                                           <  2:2094746/150‑1 (MQ=255)
             acGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcg                                                                                                                                          >  2:2171528‑M1/1‑137 (MQ=255)
               gATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGTCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgtt                                                                                                                                        >  2:5541664‑M1/1‑135 (MQ=255)
               gATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCGGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgtt                                                                                                                                        <  2:3502328‑M1/150‑16 (MQ=255)
                aTGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttc                                                                                                                                       <  2:4751443‑M1/150‑17 (MQ=255)
                 tGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttca                                                                                                                                      >  1:3709749‑M1/1‑133 (MQ=255)
                   aCGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagt                                                                                                                                    <  2:2494441‑M1/150‑20 (MQ=255)
                     gCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtac                                                                                                                                  >  1:1543821‑M1/1‑129 (MQ=255)
                       cAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgt                                                                                                                                >  1:5274874‑M1/1‑127 (MQ=255)
                       cAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTa                                                                                                                                <  1:4883976/150‑1 (MQ=255)
                        aaCCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtg                                                                                                                               <  2:4158706‑M1/150‑25 (MQ=255)
                         aCCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtgg                                                                                                                              <  1:4409576‑M1/150‑26 (MQ=255)
                          ccGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtgga                                                                                                                             <  1:2381387‑M1/150‑27 (MQ=255)
                           cGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggat                                                                                                                            <  2:5507005‑M1/150‑28 (MQ=255)
                            gTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatg                                                                                                                           >  2:5731547‑M1/1‑122 (MQ=255)
                                    aTGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgt                                                                                                                   >  2:2804874‑M1/1‑114 (MQ=255)
                                      gggTGCGAACATGCAACGTCAGGCCGGTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtat                                                                                                                 <  1:1163108‑M1/150‑39 (MQ=255)
                                       ggTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtgttggtgtcgttcagtacgtggatgcttcccgtatc                                                                                                                <  2:5073021‑M1/150‑40 (MQ=255)
                                       ggTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatc                                                                                                                <  1:3659839‑M1/150‑40 (MQ=255)
                                        gTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcg                                                                                                               >  2:3393114‑M1/1‑110 (MQ=255)
                                            gAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttat                                                                                                           >  1:5180729‑M1/1‑106 (MQ=255)
                                                aTGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaa                                                                                                       <  2:3552514‑M1/150‑49 (MQ=255)
                                                aTGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACATGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaa                                                                                                       >  1:908465‑M1/1‑102 (MQ=255)
                                                 tGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaag                                                                                                      <  1:1111532‑M1/150‑50 (MQ=255)
                                                  gCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagt                                                                                                     >  2:1912283‑M1/1‑100 (MQ=255)
                                                   cAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCaaa                                                                                                    <  2:4461/150‑1 (MQ=255)
                                                     aCGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaa                                                                                                  <  2:2634889‑M1/150‑54 (MQ=255)
                                                         cAGGCCGGTCCGACTAGGCGCGCTGATAAGCAGCTGGTTGGTAATGGTATGGAAAGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaa                                                                                              <  2:3754442‑M1/150‑58 (MQ=255)
                                                           ggCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaaga                                                                                            <  2:5779365‑M1/150‑60 (MQ=255)
                                                            gCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagac                                                                                           <  1:4148052‑M1/150‑61 (MQ=255)
                                                              cGTTCCGACTCTGCGCGCTGATAAGCCGCTGTTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacga                                                                                         <  2:1713352‑M1/150‑63 (MQ=255)
                                                              cGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacga                                                                                         <  1:4275432‑M1/150‑63 (MQ=255)
                                                                ttCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgaga                                                                                       <  1:1623558‑M1/150‑65 (MQ=255)
                                                                  ccGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatg                                                                                     >  2:5597795‑M1/1‑84 (MQ=255)
                                                                       tctGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatcc                                                                                <  2:1801701‑M1/150‑72 (MQ=255)
                                                                          gcgcgcTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccggg                                                                             <  1:4250685‑M1/150‑75 (MQ=255)
                                                                            gcgcTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtg                                                                           >  2:5401686‑M1/1‑74 (MQ=255)
                                                                            gcgcTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtg                                                                           >  1:1001087‑M1/1‑74 (MQ=255)
                                                                            gcgcTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtg                                                                           >  2:797615‑M1/1‑74 (MQ=255)
                                                                             cgcTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgt                                                                          <  1:1873109‑M1/150‑78 (MQ=255)
                                                                              gcTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaa                                                                         >  2:943185‑M1/1‑72 (MQ=255)
                                                                               cTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaag                                                                        <  1:3915006‑M1/150‑80 (MQ=255)
                                                                                 gATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGaa                                                                      <  1:2482586/150‑1 (MQ=255)
                                                                                 gATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGaa                                                                      <  1:321190/150‑1 (MQ=255)
                                                                                   tAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcagg                                                                    <  2:4878836‑M1/150‑84 (MQ=255)
                                                                                        cGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcg                                                               >  1:4652448‑M1/1‑62 (MQ=255)
                                                                                          cTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATc                                                             <  2:4573332/150‑1 (MQ=255)
                                                                                               tggtACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatcta                                                        <  1:2137795‑M1/150‑96 (MQ=255)
                                                                                                ggtACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctac                                                       <  2:4652431‑M1/150‑97 (MQ=255)
                                                                                                  tACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaa                                                     >  2:239989‑M1/1‑52 (MQ=255)
                                                                                                  tACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTa                                                     >  2:3877542/1‑150 (MQ=255)
                                                                                                   aCTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaac                                                    <  1:1701136‑M1/150‑100 (MQ=255)
                                                                                                     tggaatggaaCGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacct                                                  >  1:735797‑M1/1‑49 (MQ=255)
                                                                                                     tGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaatgttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacct                                                  >  1:4776736‑M1/1‑49 (MQ=255)
                                                                                                     tGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctactacct                                                  <  1:2994657‑M1/150‑102 (MQ=255)
                                                                                                           ggAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaa                                            >  2:5228548‑M1/1‑43 (MQ=255)
                                                                                                            gAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaa                                           <  2:3475266‑M1/150‑109 (MQ=255)
                                                                                                            gAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGAcc                                           <  2:918500/150‑1 (MQ=255)
                                                                                                             aaCGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCa                                          >  1:78432/1‑150 (MQ=255)
                                                                                                                 tGCTGTTGCCGTTGACTCCGGCGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatc                                                                <  1:4477049‑M1/124‑88 (MQ=255)
                                                                                                                  gCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacc                                     >  1:5314736‑M1/1‑36 (MQ=255)
                                                                                                                  gCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacc                                     >  1:3445593‑M1/1‑36 (MQ=255)
                                                                                                                  gCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacc                                     <  2:1831349‑M1/150‑115 (MQ=255)
                                                                                                                   cTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacaccc                                    >  2:666948‑M1/1‑35 (MQ=255)
                                                                                                                     gTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCAAATACAcc                                  >  2:1432119/1‑150 (MQ=255)
                                                                                                                      ttGCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggcatcgacatctacaacctgaccaaatacacccgtt                                 >  1:5439116‑M1/1‑32 (MQ=255)
                                                                                                                        gCCGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttct                               <  2:4270689‑M1/150‑121 (MQ=255)
                                                                                                                        gCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATAAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCAAATACACCCGt                               >  1:1241635/1‑150 (MQ=255)
                                                                                                                         ccGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttcta                              <  2:3628221‑M1/150‑122 (MQ=255)
                                                                                                                          cGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaa                             <  2:3966702‑M1/150‑123 (MQ=255)
                                                                                                                          cGTTGACTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaa                             <  1:3349778‑M1/150‑123 (MQ=255)
                                                                                                                           gTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCAAATACACCCGTTCt                            >  2:3676549/1‑150 (MQ=255)
                                                                                                                              gACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCAAATACACCCGTTCTAAc                         <  1:5073917/150‑1 (MQ=255)
                                                                                                                                cTCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaa                       <  2:2907989‑M1/150‑129 (MQ=255)
                                                                                                                                 tCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaac                      >  1:4015100‑M1/1‑21 (MQ=255)
                                                                                                                                 tCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaac                      >  1:2861805‑M1/1‑21 (MQ=255)
                                                                                                                                 tCCGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaac                      >  2:1110175‑M1/1‑21 (MQ=255)
                                                                                                                                 tCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCAAATACACCCGTTCTAACCAg                      >  2:729965/1‑150 (MQ=255)
                                                                                                                                 tCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCAAATACACCCGTTCTAACCAg                      >  2:690246/1‑150 (MQ=255)
                                                                                                                                   cGGTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaacac                    <  1:3548798‑M1/150‑132 (MQ=255)
                                                                                                                                    ggTGTAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaacacc                   >  1:177394‑M1/1‑18 (MQ=255)
                                                                                                                                      tgtAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCAAATACACCCGTTCTAACCAGAacac                 <  2:2992586/150‑1 (MQ=255)
                                                                                                                                       gtAACTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaacacctgt                >  1:5552285‑M1/1‑15 (MQ=255)
                                                                                                                                         aaCTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaacacctgtat              <  2:312915‑M1/150‑138 (MQ=255)
                                                                                                                                          aCTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaacacctgtatc             >  2:4042778‑M1/1‑12 (MQ=255)
                                                                                                                                           cTGCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctcaccagaacacctgtatca            >  2:3181935‑M1/1‑11 (MQ=255)
                                                                                                                                             gCGGTAGCTcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaacacctgtatcaac          <  2:1643815‑M1/150‑142 (MQ=255)
                                                                                                                                                     tcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaacacctgtatcaaccagatgcc  >  1:5660058‑M1/1‑1 (MQ=255)
                                                                                                                                                     tcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaacacctgtatcaaccagatgcc  >  1:2931019‑M1/1‑1 (MQ=255)
                                                                                                                                                     tcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaacacctgtatcaaccagatgcc  >  2:4937263‑M1/1‑1 (MQ=255)
                                                                                                                                                     tcgtggtggtgtcgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgagatgtatccgggtgaagcaggtatcgacatctacaacctgaccaaatacacccgttctaaccagaacacctgtatcaaccagatgcc  >  2:130756‑M1/1‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCGTTCCTGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCAAATACACCCGTTCTAACCAGAACACCTGTATCAACCAGAT  >  NC_000913/4183249‑4183547

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.