| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1484967 | 69 (0.760) | 4 (0.050) | 4/258 | NT | 5.7% | coding (1907/3903 nt) | hrpA | putative ATP‑dependent helicase |
| ? | NC_000913 | = 1484972 | 69 (0.820) | coding (1912/3903 nt) | hrpA | putative ATP‑dependent helicase | |||||
ATTATCTCAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1484811‑1484967‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcggcatCTTTCATGCCGATATGGGAAAGTAAACCGGTCAGCAACGCAATGTGAATTTCGCGATACTCCGCCGGTTCGCTGTTAACCGGAATGCCAAGTTCTTTCACCACCTGACGCAACTGGGTGTAGATATCCTGCCATTCGCGCACGCG < NC_000913/1484972‑1484828 ATTATCTCAACTATCTGCTCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCAT > 2:534738/1‑149 TCTCAACTATCTGCGCGTGCGCGAATGGCAGCATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCG > 1:187426/1‑149 TCAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGC < 1:40549/149‑1 TCAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGC < 1:657615/149‑1 CAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGCA > 1:420174/1‑149 CAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGGCAGGTGGTGAAAGAACTTGGCATTCACGTTAACAGCGAACCGGCGGAGTATCGCGTAATTCACATTGCCTTGCTTCCCTGTTTACTTTCCCATATCGGCA > 1:513452/1‑149 AACTCTCTGACCGGGCGCGAATGGCAGGAAATCTACACCCAGTTGCGTCAGGTGGGGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGCAT < 2:161112/149‑1 AACTATCTGCGCGTGCTCGAATGTAAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGAACGGTTTACTTTCCCATATCGGCAT < 2:417238/149‑1 AACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACATCGAACCGGCGGAGTATCGCGAAATGCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGCAT < 1:1372606/149‑1 AACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGCAT < 1:815588/149‑1 AACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTACGGTTAACAGCGAACCGTCGGAGTATCGCGATATTCACATTGCGGTGCTGACAGGTTTAATTTCCCATATCGGCAT > 2:460002/1‑149 AACTAACTGCGCGTGCGCGAATGGCAGGATATCTACACACAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGAATCGCTAAAAACACAATGCGTTGCTGCCCGGTTTACTTTACCATATCCGCAg > 2:637057/1‑148 CGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGCATCTTTCATGCCGATAT < 1:1557236/149‑1 GCGAATTGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGCATCTTTCATGCCGATATG < 1:25092/149‑1 TACACCCAGTTGCGTCAGGTGGTGAACGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGCATCTTTCATGCCGATATGGGAAAGTAAACCGGTCA < 2:1320728/149‑1 CCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGTTTTACTTTCCCATATCGGCATCTTTCATGCCGATATGGGAAAGTAAACCGGTCAGCAAC < 2:1487905/149‑1 TATCGGCATCTTTCATGCCGATATGGGAAAGTAAACCGGTCAGCAACGCAATGTGAATTTCGCGATACTCCGCCGGTTCGCTGTTAACCGGAATGCCAAGTTCTTTCACCACCTGACGCAACTGGGTGTAGATATCCTGCCATTCGCGC > 2:716670/1‑149 CGGCATCTTTCATGCCGATATGGGAAAGTAAACCGGTCAGCAACGCAATGTGAATTTCGCGATACTCCGCCGGTTCGCTGTTAACCGGAATGCCAAGTTCTTTCACCACCTGACGCAACTGGGTGTAGATATCCTGCCATTCGCGCACG > 2:178470/1‑149 GGCATCTTTCATGCCGATATGGGAAAGTAAACCGGTCAGCAACGCAATGTGAATTTCGCGATACTCCGCCGGTTCGCTGTTAACCGGAATGCCAAGTTCTTTCACCACCTGACGCAACTGGGTGTAGATATCCTGCCATTCGCGCACGC > 2:326029/1‑149 GCATCTTTCATGCCGATATGGGAAAGTAAACCGGTCAGCAACGCAATGTGAATTTCGCGATACTCCGACGGTTCGCTGTTAACCGGAATGCCAAGTTCTTTCACCACCTGACGCAACTGGGTGTAGATATCCTGCCATTCGCGCACGCG > 1:1384532/1‑149 ATTATCTCAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1484811‑1484967‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcggcatCTTTCATGCCGATATGGGAAAGTAAACCGGTCAGCAACGCAATGTGAATTTCGCGATACTCCGCCGGTTCGCTGTTAACCGGAATGCCAAGTTCTTTCACCACCTGACGCAACTGGGTGTAGATATCCTGCCATTCGCGCACGCG < NC_000913/1484972‑1484828 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |