New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994980 (0.000)129 (1.470) 100/268 NT 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 143 total aligned reads displayed.

CTTCTCAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCG  >  NC_000913/1299350‑1299646
                                                                                                                                                    |                                                                                                                                                    
 ttctCAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAa                                                                                                                                                     >  1:670369‑M1/1‑148 (MQ=255)
   ctcAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAata                                                                                                                                                   >  1:538421‑M1/1‑146 (MQ=255)
   ctcAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTAACCATCATGTTATTTTCGCCACATAATAATCCTGGGCTTGCTTAAGAATAATTGAAATGATATTATTACTTCCACTGCCTTTGGTATAGGAAAGTGCTAAata                                                                                                                                                   >  2:146073‑M1/1‑146 (MQ=255)
     cAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataat                                                                                                                                                 >  1:154101‑M1/1‑144 (MQ=255)
      aaaTTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                                                                                >  2:292938‑M1/1‑143 (MQ=255)
      aaaTTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                                                                                >  2:1321575‑M1/1‑143 (MQ=255)
       aaTTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATTTTTTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                                                                               >  1:1091703‑M1/1‑142 (MQ=255)
                     ataAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatt                                                                                                                                 >  2:258953‑M1/1‑128 (MQ=255)
                     ataAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatt                                                                                                                                 >  1:182122‑M1/1‑128 (MQ=255)
                      taAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatta                                                                                                                                >  2:1519464‑M1/1‑127 (MQ=255)
                        aGGATTTCCTTAACTGCTTCTCCTCACCTTCATGTTATTTTCGCCACATCATTATGCTGGGCTTGCTGAATAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattatt                                                                                                                              <  2:164986‑M1/149‑25 (MQ=255)
                          tatTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgt                                                                                                                            <  2:463526‑M1/148‑27 (MQ=255)
                          gATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgt                                                                                                                            <  1:1156307‑M1/149‑27 (MQ=255)
                          gATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATACCACTGCCTTTCGAAGAGGAAAGTGCTAAataataatcaattcttaaataattct                                                                                                                            >  1:980875‑M1/1‑123 (MQ=255)
                           aTTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtg                                                                                                                           >  2:254287‑M1/1‑122 (MQ=255)
                            tttCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgc                                                                                                                          >  2:601164‑M1/1‑121 (MQ=255)
                               ccTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatt                                                                                                                       >  2:820545‑M1/1‑118 (MQ=255)
                                 ttAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttc                                                                                                                     >  1:784495‑M1/1‑116 (MQ=255)
                                  tAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttca                                                                                                                    >  2:334157‑M1/1‑115 (MQ=255)
                                   aaCTTCTTATCCTCAACATCATGTTTTTTTCGCCACATCATTATCCTGGGCTTGCTGAATAATATTTGAAATGATTTTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                                                                   <  2:1175290‑M1/149‑36 (MQ=255)
                                   aaCTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGCAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataaaaatcaattgttaaattattgtgcatttcac                                                                                                                   <  2:1426491‑M1/149‑36 (MQ=255)
                                     cTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAGTTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcacta                                                                                                                 <  1:1342070‑M1/149‑38 (MQ=255)
                                     cTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTACACTGACTTTGGTAGAGGAATGTGCTAAataataataaattgttaaattattgtgcatttcacta                                                                                                                 >  2:506696‑M1/1‑112 (MQ=255)
                                      tGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactac                                                                                                                >  2:1227989‑M1/1‑111 (MQ=255)
                                         ttCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCAATGCCTTTGGTAGAGGAAAGTGCTAAatattaatcaattgttaaattattgtgcatttcactacttg                                                                                                             >  2:308312‑M1/1‑108 (MQ=255)
                                            tcctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaac                                                                                                          >  1:59895‑M1/1‑105 (MQ=255)
                                             cctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                         >  2:1110646‑M1/1‑104 (MQ=255)
                                             cctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                         >  1:80628‑M1/1‑104 (MQ=255)
                                              ctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAGTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactg                                                                                                        >  2:445764‑M1/1‑103 (MQ=255)
                                              ctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactg                                                                                                        <  1:482806‑M1/149‑47 (MQ=255)
                                              ctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactg                                                                                                        <  1:1208262‑M1/149‑47 (MQ=255)
                                              ctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactg                                                                                                        <  2:658275‑M1/149‑47 (MQ=255)
                                              ctcACCATAATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCAACTGCCTTTGTTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgtaactt                                                                                                        >  2:1348096‑M1/1‑103 (MQ=255)
                                               tcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCGTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgt                                                                                                       <  2:936303‑M1/149‑48 (MQ=255)
                                                         gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaa                                                                                             >  1:379014‑M1/1‑92 (MQ=255)
                                                           tATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAATTGCTAAataataatcaaatgataaattattgtgcatttcaatactcgaactgtaatcagaaaaga                                                                                           >  1:805932‑M1/1‑90 (MQ=255)
                                                               ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagagaagataga                                                                                       >  1:1277788‑M1/1‑86 (MQ=255)
                                                               ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                                                                       <  2:534596‑M1/149‑64 (MQ=255)
                                                               ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                                                                       >  1:173498‑M1/1‑86 (MQ=255)
                                                                tCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                                                                      <  1:618258‑M1/149‑65 (MQ=255)
                                                                      catcatAATCCTGGGCTTGCGGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatttttgtgcatttcactactggaactgtaatcagaaaagatagacatgctt                                                                                <  1:528857‑M1/149‑71 (MQ=255)
                                                                        tcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttag                                                                              <  2:59895‑M1/149‑73 (MQ=255)
                                                                         catAATGCTGGGCTTTCTGAATAATAATTTAAATGATATTATTAATTCAACTGACTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                                                                             <  1:274448‑M1/149‑74 (MQ=255)
                                                                         catAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                                                                             <  2:978743‑M1/149‑74 (MQ=255)
                                                                         catAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                                                                             <  1:292938‑M1/149‑74 (MQ=255)
                                                                          atAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTTCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagcc                                                                            <  2:429198‑M1/149‑75 (MQ=255)
                                                                               ccTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatct                                                                       >  1:67979‑M1/1‑70 (MQ=255)
                                                                                 tGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctct                                                                     >  1:427912‑M1/1‑68 (MQ=255)
                                                                                  gggCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcagtactggaactgtaatcagaaaagatagacttgcttagccaatcgctt                                                                    >  1:1569312‑M1/1‑67 (MQ=255)
                                                                                   ggCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAATGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctat                                                                   >  1:575455‑M1/1‑66 (MQ=255)
                                                                                   ggCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctat                                                                   <  2:682527‑M1/149‑84 (MQ=255)
                                                                                   ggCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctat                                                                   >  2:874845‑M1/1‑66 (MQ=255)
                                                                                    gattgcTTAAGAAAAATTGAAATGATATTATTAATTACACTTCCTTTGGTAGATGAAAGTGCTAAataataatcaattgttaaattatagtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatt                                                                  <  2:761916‑M1/147‑85 (MQ=255)
                                                                                        gCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgat                                                              >  1:1291923‑M1/1‑61 (MQ=255)
                                                                                         cTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTTGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgatt                                                             <  1:1321575‑M1/149‑90 (MQ=255)
                                                                                          tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattg                                                            >  2:459910‑M1/1‑59 (MQ=255)
                                                                                            tagaatAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaa                                                          <  1:732918‑M1/148‑93 (MQ=255)
                                                                                            aagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaa                                                          >  2:1137729‑M1/1‑57 (MQ=255)
                                                                                              gaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTACAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaatt                                                        <  2:1189426‑M1/149‑95 (MQ=255)
                                                                                                  aatTGAAATGCTATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcagtactggatatgttttctgaaaagatagacctgattagccaatctctattgtattgatttgaaa                                                    >  2:1011843‑M1/1‑51 (MQ=255)
                                                                                                   atTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaag                                                   >  1:442018‑M1/1‑50 (MQ=255)
                                                                                                   atTGAAATGATATTATTAATTCCACTGCCTTAGGTAGAGTTAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgtaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaag                                                   <  2:860921‑M1/149‑100 (MQ=255)
                                                                                                    ttGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaaga                                                  >  2:249483‑M1/1‑49 (MQ=255)
                                                                                                      gAAATGATATTATTAATTCCACTGCCTTTGGTAGACGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggacctgtaatcagaaaagatagacatggttagccattctctatttgattgaatggaaagatg                                                >  2:859787‑M1/1‑47 (MQ=255)
                                                                                                      gAAATGATATTATTAATTCAACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatg                                                >  2:859789‑M1/1‑47 (MQ=255)
                                                                                                       aaaTGATATTTTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgtatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgt                                               >  1:934485‑M1/1‑46 (MQ=255)
                                                                                                       aaaTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgtatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgt                                               >  1:930076‑M1/1‑46 (MQ=255)
                                                                                                       aaaTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctatatttgattgaattgaaagatgt                                               >  1:1057662‑M1/1‑46 (MQ=255)
                                                                                                         aTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                             <  2:379014‑M1/149‑106 (MQ=255)
                                                                                                               ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaag                                       >  2:480433‑M1/1‑38 (MQ=255)
                                                                                                               ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactaccggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaag                                       <  2:182122‑M1/149‑112 (MQ=255)
                                                                                                                tattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactacttgaactgtaatcataaaagatagacatgcttagccaatatctatttgattgaattgaaagaagtttgttaagg                                      >  2:1388134‑M1/1‑37 (MQ=255)
                                                                                                                   taATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcat                                   <  2:1563489‑M1/149‑116 (MQ=255)
                                                                                                                   taATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcat                                   <  2:9687‑M1/149‑116 (MQ=255)
                                                                                                                       tCCACTGCCTTGGTTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagtaaagatagacatgcttagccaatctctatttgattgaattgaaagatttttgttaaggcatggat                               <  1:1012790‑M1/149‑120 (MQ=255)
                                                                                                                        ccACTGCCTTTGGTAGAGGAAAGTGCTAAataataaacaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtatgttaaggcatggatg                              >  2:333850‑M1/1‑29 (MQ=255)
                                                                                                                          cctGCCTATGGTAGAGGAAACTGCAAAataataatcaaatgttaaataattctgcatttcactacaggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgca                            <  2:627486‑M1/148‑123 (MQ=255)
                                                                                                                          aCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgca                            >  2:113135‑M1/1‑27 (MQ=255)
                                                                                                                            ttccttTTGTAGAGGAAAGTGCTAAataataataaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaag                          <  1:1519464‑M1/147‑125 (MQ=255)
                                                                                                                              ccTTTGGTAGAGGAAAGTGCTATataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagaaagccatgcttagccaatctctatttgattgaatggatagatgtttgttaaggcttggatgcaagct                        >  2:179737‑M1/1‑23 (MQ=255)
                                                                                                                              ccTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagct                        <  2:154101‑M1/149‑127 (MQ=255)
                                                                                                                               cTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagcta                       <  2:470395‑M1/149‑128 (MQ=255)
                                                                                                                                tttGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctat                      <  2:727282‑M1/149‑129 (MQ=255)
                                                                                                                                    gTAGATGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagat                  >  2:1453587‑M1/1‑17 (MQ=255)
                                                                                                                                    gTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagat                  >  1:555649‑M1/1‑17 (MQ=255)
                                                                                                                                     tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagatt                 >  2:1282548‑M1/1‑16 (MQ=255)
                                                                                                                                     tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagatt                 <  2:538421‑M1/149‑134 (MQ=255)
                                                                                                                                      agagGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattc                <  1:254287‑M1/149‑135 (MQ=255)
                                                                                                                                      agagGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattc                >  2:1556361‑M1/1‑15 (MQ=255)
                                                                                                                                       gagGAAAGTGCTAAataataatcaattgttaatttattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgatttgaaagatgtttgttaaggcatggatgcaagctatagattct               <  1:263430‑M1/149‑136 (MQ=255)
                                                                                                                                          gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatgtatgcaagctatagattatgat            >  2:368633‑M1/1‑11 (MQ=255)
                                                                                                                                          gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgat            >  1:1372106‑M1/1‑11 (MQ=255)
                                                                                                                                          gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgat            >  2:1476483‑M1/1‑11 (MQ=255)
                                                                                                                                          gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgat            >  2:363363‑M1/1‑11 (MQ=255)
                                                                                                                                           aaaGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctatatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgata           >  2:618704‑M1/1‑10 (MQ=255)
                                                                                                                                               tgataaataataatcaattgttaaattattgtgcatttcactactggaactgtaataagaaaagatatacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggt       <  1:308312‑M1/146‑144 (MQ=255)
                                                                                                                                               tGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggt       <  1:1467106‑M1/149‑144 (MQ=255)
                                                                                                                                                 cTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcaaggatgcaagctatagattctgatacggtca     >  1:73463‑M1/1‑4 (MQ=255)
                                                                                                                                                   aaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggtcaat   >  2:908537‑M1/1‑2 (MQ=255)
                                                                                                                                                    aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggtcaata  >  2:945745‑M1/1‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTTCTCAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCG  >  NC_000913/1299350‑1299646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.