New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 199308764 (0.710)5 (0.060) 4/266 NT 7.4% coding (1620/1833 nt) uvrC excinuclease UvrABC, endonuclease subunit
?NC_000913 = 1993103 64 (0.730)coding (1604/1833 nt) uvrC excinuclease UvrABC, endonuclease subunit

TCCTCGACGCTGGCGTTACGTAAACCTTGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGCAACGCCAAGTAGCAGCG  >  NC_000913/1992941‑1993235
                                                                                                                                                  |                                                                                                                                                    
tCCTCGACGCTGGCGTTACGTAAACCTTGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTATTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTg                                                                                                                                                    <  2:607544/149‑1 (MQ=255)
      aCGCTGGCGTTACGTAAACCTTGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCAtg                                                                                                                                              >  1:395501/1‑149 (MQ=255)
       cGCTGGCGTTACGTAAACCTTGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCAtgt                                                                                                                                             >  1:81085/1‑149 (MQ=255)
           ggCGTTACGTAAACCTTGCACACCGCCAATATATTTCAACAACCTTTGCCGACGTTGTGGCCCGACGCCTTCAATGGGTTCCAGGGAACAGGTATTTTTGACCTTCGACCGTTTTTTACGGAGCCCGCCAATCGCGTGATCATGTGAtt                                                                                                                                         <  1:917658/149‑1 (MQ=255)
            gCGTTACGTAAACCTTGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACAGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGAtgc                                                                                                                                        >  1:1536621/1‑147 (MQ=255)
               ttACGTAAACCTTGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCAGCCAATCGCGGGATCATGTGATTCATc                                                                                                                                     <  1:959764‑M2/149‑2 (MQ=255)
                tACGTAAACCTTGCAAACCGCGCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGGTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATcg                                                                                                                                    >  1:805022‑M2/1‑147 (MQ=255)
                    tAAACCTTGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGaa                                                                                                                                >  1:150143/1‑149 (MQ=255)
                      aaCCTTGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGatgaatcacatgatcacgcgattg                                                                                                                              <  1:1292816‑M1/149‑25 (MQ=255)
                      aaCCTTGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTATTGGCCCGACGCCTTCAATGGTTTCCAGGTAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGatgaatcacatgatcacgcgattg                                                                                                                              <  1:723394‑M1/149‑25 (MQ=255)
                       aCCTTGCAAACCGCCCATTTATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTTTTTTTGTCCTTCGCCCGTGTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAatat                                                                                                                             >  2:1482283/1‑149 (MQ=255)
                        ccTTGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAGTGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATg                                                                                                                            >  2:27111/1‑149 (MQ=255)
                        ccTTGCAAACCGCCCAAATATTTCAACAACATTTGCCGACGTTTTGGCACGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCACGTTTTTTACGGTGCCCGCCAATCGCGTGAACATGTGATTCATCGCGAATATg                                                                                                                            >  2:1221502/1‑149 (MQ=255)
                        ccTTGCAAACCCCCCATATATTTCACCAACATTTGCCGACGTGTGGGCCCGACGCCGTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTACGCCCGTTTTTTACGGTGCCCTCCAATCGCGatgaatcacatgatcacgcgattggc                                                                                                                            <  1:1166549‑M1/149‑27 (MQ=255)
                          ttGCAAACCGCACATATATTTCCACAACATTTGCCTACGTGTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGGCCGTGTTTTACGGTGCCCGCGAATCGCGTGATCATGTGATTCATCGCGAATATGCt                                                                                                                          <  1:474865/149‑1 (MQ=255)
                           tGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCACTGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTg                                                                                                                         <  1:73452/149‑1 (MQ=255)
                            gCAAACCGCCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGACCGATTTTTACTGTGCCCGACAATCGCGTGATCATGTGATTCCTACCGAATATGCTgg                                                                                                                        >  2:187953/1‑149 (MQ=255)
                             cAAACCGGCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGACTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGACAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGa                                                                                                                       <  2:1153324/149‑1 (MQ=255)
                                         atatTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCGTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGGTTTTTACGGTGCCCGCCAATCGCGTGATCCGGTGAGGCGTCGCGGATATGCTGGATAACATGCAgcg                                                                                                           >  2:1443080/1‑149 (MQ=255)
                                             ttCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGatgaatcacatgatcacgcgattggcg                                                                                                                           >  1:1017380‑M1/1‑102 (MQ=255)
                                             ttCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGatgaatcacatgatcacgcgattggcg                                                                                                                           <  2:1017380‑M1/129‑28 (MQ=255)
                                             ttCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCggg                                                                                                       >  1:111998/1‑149 (MQ=255)
                                              tcaaacacaTTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATTACATGCAGCGCGGGt                                                                                                      <  2:1173246/143‑1 (MQ=255)
                                              tCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGt                                                                                                      <  1:414095/149‑1 (MQ=255)
                                               caacaaCATTTGCCGACGTTTTGGCCCGACGCCTTCAGTGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTg                                                                                                     <  1:27111/149‑1 (MQ=255)
                                               caacaaCATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTg                                                                                                     <  1:1537654/149‑1 (MQ=255)
                                                     caTTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGAATCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTg                                                                                               >  2:161553/1‑149 (MQ=255)
                                                         tcgcGACGTTATGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGAACTTCGCCCGTTTTATACTGGGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTggcgg                                                                                           <  2:1010290/146‑1 (MQ=255)
                                                             gACGTTTTGGCCCGACGCCTTCAATGGTGTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTGTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCaaa                                                                                       <  2:288737/149‑1 (MQ=255)
                                                             gACGTTTTGGCCCGACGCCTTCAATGCTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCaaa                                                                                       <  2:425926/149‑1 (MQ=255)
                                                              ccGTTTTGGCCCGCCGCCGTCAATGGTTTCCAGGGAACTGGTATTTTTGCCCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTCGCGGCAAAc                                                                                      >  2:40967/2‑149 (MQ=255)
                                                                gTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTa                                                                                    >  1:621667/1‑149 (MQ=255)
                                                                  tttGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTaaa                                                                                  <  1:1416485/149‑1 (MQ=255)
                                                                   ttGGCCCGCCGCCTGCAATGGTTTCCAGGGAACAGGTATTTTTGACCATCGCCCGTTTTTTCCGGTGCCCGCCAATCGCGTGAGCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAAt                                                                                 <  1:854009/149‑1 (MQ=255)
                                                                     ggCCCGACGCCTTCTATGGTTTCCTGGGAACTGGTATTTTTGCCCTTCGCCGGTTTTTTACGGTGCCCGCCAATCGCGTGTTCATGGGATTCATCGCGAATATGCTGGATACCATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATcc                                                                               <  2:981780/149‑1 (MQ=255)
                                                                     ggCCCGACGCCTTCAATGGTGTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATcc                                                                               <  2:976205/149‑1 (MQ=255)
                                                                      gCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCTGCAAACTAAATccc                                                                              >  1:195443/1‑149 (MQ=255)
                                                                       cccGACGCCTTCAATGGTTTCCAGGTAAGTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCTGCGCGGGTGAATCTGGCGGCAAACTAAATCCCt                                                                             <  2:417882/149‑1 (MQ=255)
                                                                       cccGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCt                                                                             >  1:4246/1‑149 (MQ=255)
                                                                              ccTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTc                                                                      <  1:753481/149‑1 (MQ=255)
                                                                              ccTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTc                                                                      <  1:1335579/149‑1 (MQ=255)
                                                                               cTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTGTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTcc                                                                     <  2:1396953/149‑1 (MQ=255)
                                                                                ttCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCg                                                                    <  1:579963/149‑1 (MQ=255)
                                                                                 tCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCgg                                                                   >  1:404515/1‑149 (MQ=255)
                                                                                   aaTGGTTTCCAGGGACCTGGTATTTTTGACCTTCGCCCGTTATTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGcc                                                                 <  1:1087461/149‑2 (MQ=255)
                                                                                       gTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCtaa                                                             <  2:81085/149‑1 (MQ=255)
                                                                                        tttCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAg                                                            <  2:395501/149‑1 (MQ=255)
                                                                                           ccAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGAGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAAc                                                         <  2:1212248/149‑1 (MQ=255)
                                                                                            cAGGGAACTGGTATTTTTGACCTTCGCCCGGTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGATTATGCTGGATAACATGCAGCGCGGGTTAATCTGGAGGCAAACTAAATACCTCACATTCAGGCTCAAAGAACa                                                        >  2:787672/1‑149 (MQ=255)
                                                                                             aGGGAACTGGTATTTTTGCCCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGAGGGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTCAAGCCCGCACCTTCCGGCTCCAAGatccg                                                       >  1:909759/1‑145 (MQ=255)
                                                                                             aGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAAGATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCACACTAAATCCCTCACCTTCCGGCTCAAAGACCac                                                       >  1:80606/1‑148 (MQ=255)
                                                                                                   ttgttATTTTTGACCTTCGAACGTTTTTTACGGTGCACGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTtc                                                 <  2:1031073/145‑1 (MQ=255)
                                                                                                   cTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTtc                                                 <  1:1286611/149‑1 (MQ=255)
                                                                                                     ggTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTtcca                                               <  2:150143/149‑1 (MQ=255)
                                                                                                     ggTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACATTCCGGCTCAAAGAACAGCGTTtcca                                               >  1:1031073/1‑149 (MQ=255)
                                                                                                      gTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTtccag                                              >  1:283125/1‑149 (MQ=255)
                                                                                                           tttGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATGATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAATCGTCATCCCTCAGCGTCGGGCGCAAAGAACAGCGTGtccagtcaag                                         >  2:513441/1‑149 (MQ=255)
                                                                                                                ccTTCGACCTTTTTTGACGTTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAATGAACAGCGTTTCCAGTCCAGCCTTa                                    <  1:231344/149‑1 (MQ=255)
                                                                                                                 cTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTAc                                   >  2:312969/1‑149 (MQ=255)
                                                                                                                  ttCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACg                                  >  1:691030/1‑149 (MQ=255)
                                                                                                                       ccGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTg                             >  1:1559688/1‑149 (MQ=255)
                                                                                                                        cGTTTTTTACCGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGCCGGCAAACAAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGc                            >  2:982/1‑149 (MQ=255)
                                                                                                                         gTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGACCAGCGTTTCCAGTCCAGCCTTACGATCTGCt                           >  2:299351/1‑149 (MQ=255)
                                                                                                                              ttACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCttt                      >  2:224235/1‑149 (MQ=255)
                                                                                                                              ttACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGCCCAGCCTTACGATCCGCTCCttt                      <  1:1206022/149‑1 (MQ=255)
                                                                                                                                 cGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGc                   <  2:1039527/149‑1 (MQ=255)
                                                                                                                                    tGCCCGCTATTCGTGTGATGATGTGATTCATCGCGAATATGCTGTCTAACATGCAGCGCGGTTGAATCTGGCTGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGCAAc                <  2:1515445/149‑1 (MQ=255)
                                                                                                                                    tGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGCAAc                <  1:553779/149‑1 (MQ=255)
                                                                                                                                    tGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATAAGCTGCATAACAAGCAGCGCGGGTGATTCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGCAAc                <  2:41413/149‑1 (MQ=255)
                                                                                                                                        cGCCAATCGCGTGATCATGTGATTCATcgcgattggcgggcaccgtaaaaaacgggcgaaggtcaaaaataccagttccctggaaaccattgaaggcgtcgggccaaaacgtcggcaaatgttgttgaa                                >  1:1017380‑M2/1‑27 (MQ=255)
                                                                                                                                        cGCCAATCGCGTGATCATGTGATTCATcgcgattggcgggcaccgtaaaaaacgggcgaaggtcaaaaataccagttccctggaaaccattgaaggcgtcgggccaaaacgtcggcaaatgttgttgaa                                <  2:1017380‑M2/129‑103 (MQ=255)
                                                                                                                                        cGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGCAACGCCa            >  1:1335903/1‑149 (MQ=255)
                                                                                                                                        cGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGCAACGCCa            >  1:1332262/1‑149 (MQ=255)
                                                                                                                                         gCCAATCGCGTGATCATGTGATTCATcgcgattggagggcaccgtaaaaaacgggcgtaggtcaaaaataccagttccctggaaaccattgacggcgtcgggcccacacgtcggcaaatgttggtgaaatatatggggggtttgcaagg           <  1:1166549‑M2/149‑124 (MQ=255)
                                                                                                                                          ccAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGCAACGCCAAg          >  1:1115970/1‑149 (MQ=255)
                                                                                                                                           cAATCGCGTGATCATGTGATTCATcgcgattggcgggcaccgtaaaaaacgggcgaaggtcaaaaataccagttccctggaaaccattgaaggcgtcgggccaaaacgtcggcaaatgttgttgaaatatatgggcggtttgcaaggtt         <  1:1292816‑M2/149‑126 (MQ=255)
                                                                                                                                           cAATCGCGTGATCATGTGATTCATcgcgattggcgggcaccgtaaaaaacgggcgaaggtcaaaaataccagttacctggaaaccattgaaggcgtcgggccaatacgtcggcaaatgttgttgaaatatatgggcggtttgcaaggtt         <  1:723394‑M2/149‑126 (MQ=255)
                                                                                                                                              tCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGCAACGCCAAGTagc      >  2:1163699/1‑149 (MQ=255)
                                                                                                                                                 cgatgaatcacatgatcacgcgattggcgggcaccgtaaaaaacgggcgaaggtcaaaaataccagttccctggaacccattgaaggcgtcgggccaaaacgtcggcaaatgttgttgaaatatatgcgcggtttgcaaggtttacgta   >  1:805022‑M1/1‑2 (MQ=255)
                                                                                                                                                 cgTTATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGCAACGCCAAGTagcagc   <  1:1143074/149‑1 (MQ=255)
                                                                                                                                                  gatgaatcacatgatcccgcgattggctggcaccgtaaaaaacgggcgaaggtcaaaaataccagttccctggaaaccattgaaggcgtcgggccaaaacgtcggcaaatgttgttgaaatatatgggcggtttgcaaggtttacgtaa  <  1:959764‑M1/149‑149 (MQ=255)
                                                                                                                                                  gTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGCAACGCCAAGTAGCAGCg  <  1:433077/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
TCCTCGACGCTGGCGTTACGTAAACCTTGCAAACCGCCCATATATTTCAACAACATTTGCCGACGTTTTGGCCCGACGCCTTCAATGGTTTCCAGGGAACTGGTATTTTTGACCTTCGCCCGTTTTTTACGGTGCCCGCCAATCGCGTGATCATGTGATTCATCGCGAATATGCTGGATAACATGCAGCGCGGGTGAATCTGGCGGCAAACTAAATCCCTCACCTTCCGGCTCAAAGAACAGCGTTTCCAGTCCAGCCTTACGATCTGCTCCTTTGGCAACGCCAAGTAGCAGCG  >  NC_000913/1992941‑1993235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.