BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3423554	92 (1.020)	7 (0.080)	6/274	NT	7.1%	intergenic (‑12/+26)	rrfF/thrV	5S ribosomal RNA of rrnD operon/tRNA‑Thr
*	?	NC_000913	4171603 =	NA (NA)	7 (0.080)	6/274	NT	7.1%	intergenic (+59/‑34)	rrlB/rrfB	23S ribosomal RNA of rrnB operon/5S ribosomal RNA of rrnB operon

Only 100 of 103 total aligned reads displayed.

TGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAC  >  NC_000913/3423412‑3423702

tGTTTAATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGGCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGc                                                                                                                                                <  2:899878/149‑1 (MQ=255)

    ttATTTGATGTCTGGCAGTTCCCTACTCTGTCATGGGGAGACCCCACACTACGATCGGCGCTTCTGCGATTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGaa                                                                                                                                            <  1:1134458/149‑1 (MQ=14)

     tATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAACATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCAGACGAAc                                                                                                                                           >  1:863770/1‑149 (MQ=255)

        ttGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACttt                                                                                                                                        <  2:768219/149‑1 (MQ=255)

         tGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTa                                                                                                                                       <  2:243156/149‑1 (MQ=255)

           aTGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAAc                                                                                                                                     <  1:459365/149‑1 (MQ=255)

           aTGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAAc                                                                                                                                     <  1:1429533/149‑1 (MQ=255)

            tGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGCACTTTAAcc                                                                                                                                    >  1:64184/1‑149 (MQ=255)

                tGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAtcagaacgcagaagcggtctga                                                                                                                                <  1:873486‑M1/149‑23 (MQ=255)

                tGGCAGTTCCCTACTCTCGAATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTaaa                                                                                                                                <  1:754708/149‑1 (MQ=255)

                  gCAGTTCCCTTCTCTCGCCTGGGGCGACCCCACACTACCCTCGGCGCTTCGGCGTGTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAATTTCTTTTCTAATCTGCCGAACTTTAACCTaaaaa                                                                                                                              <  1:1316801/149‑1 (MQ=17)

                  gCAGTTCCCTCCTCTCGCTTGGGGAGACCCCACAGTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTaaaaa                                                                                                                              <  1:1311035/149‑1 (MQ=255)

                  gCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTAtcagaacgcagaagcggtctgata                                                                                                                              <  1:1123165‑M1/149‑25 (MQ=255)

                  gCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTaaaaa                                                                                                                              <  1:10681/149‑1 (MQ=255)

                  gCAGTTCCCTACTCTCGCATGAGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGGGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTAtcagaacgcagaagcggtctgata                                                                                                                              <  2:641436‑M1/149‑25 (MQ=255)

                  gCAGGTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTaaaaa                                                                                                                              <  2:817617/149‑1 (MQ=255)

                   cAGTTCCCTACGCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAg                                                                                                                             <  1:226337/149‑1 (MQ=255)

                    aGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAgt                                                                                                                            <  1:1397548/149‑1 (MQ=255)

                     gtgcccTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCAACGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAgtg                                                                                                                           <  2:1310988/146‑1 (MQ=255)

                     ggtCCCTACTCTCGCAGGGGGAGACCCCACACTCCCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAgtg                                                                                                                           <  1:1008641/147‑1 (MQ=255)

                     gTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAgtg                                                                                                                           <  1:25697/149‑1 (MQ=255)

                     gTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAAGGGGGCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAACgtg                                                                                                                           <  2:855272/149‑1 (MQ=255)

                      ttacctacTCTCGCATGTGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGTGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAtcagaacgcagaagctgtctgataaaac                                                                                                                          <  1:488848‑M1/146‑29 (MQ=255)

                      ttCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCCCTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAgtgg                                                                                                                          <  2:1209252/149‑1 (MQ=255)

                       tCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTAtcagaacgcagaagcggtctgataaaaca                                                                                                                         <  1:473784‑M1/149‑30 (MQ=255)

                         ccTACTCTCGCATGGGTAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGc                                                                                                                       <  2:67385/149‑1 (MQ=255)

                         ccTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTACCCTAAAAAGTGGTGc                                                                                                                       >  1:399860/1‑149 (MQ=255)

                         ccTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGc                                                                                                                       >  1:26225/1‑149 (MQ=255)

                          cTACTCTCGCATGGGGAGACCCCACACTACCCTCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAGGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCt                                                                                                                      <  2:920820/149‑1 (MQ=255)

                          cTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCt                                                                                                                      <  1:176030/149‑1 (MQ=255)

                           tACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTg                                                                                                                     <  1:660838/149‑1 (MQ=255)

                            aCTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGa                                                                                                                    <  1:105312/149‑1 (MQ=255)

                             ctctCGCATGGGGAGACCCCACACTATCATCTGCGCTACGTCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTTGGACGACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGAt                                                                                                                   <  1:857764/149‑1 (MQ=18)

                              tctcGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATa                                                                                                                  >  2:832375/1‑149 (MQ=255)

                              tctcGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATa                                                                                                                  >  1:1265345/1‑149 (MQ=255)

                              tctcGCATGGGGAGACCCCACACTACCATCGGCGCGACGGCGTTTCACTTCTGAGGTCGGCATGGGGGCAGGGGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTTAAAAGTGGTGCTGATa                                                                                                                  <  2:1067702/149‑1 (MQ=18)

                                  gCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCa                                                                                                              <  2:1421427/149‑1 (MQ=255)

                                  gCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCa                                                                                                              <  2:743033/149‑1 (MQ=255)

                                  gCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTGCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCa                                                                                                              <  2:1200921/149‑1 (MQ=255)

                                  gCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTGCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCa                                                                                                              <  1:1020312/149‑1 (MQ=255)

                                   cATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCag                                                                                                             <  2:12801/149‑1 (MQ=255)

                                     tGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCagag                                                                                                           <  1:53501/149‑1 (MQ=255)

                                       gggTGACCCCACACTACCCTGGGCGCTACGGCGTTTCACTTCTGAGTTCTGCTTGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACGCAGAGTc                                                                                                         <  2:863770/149‑1 (MQ=21)

                                       gggAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTc                                                                                                         <  2:1242969/149‑1 (MQ=255)

                                               ccACAGTACCATCGGCGCTAGGGAGTTTCACTTCTGAGGTCGGCATGGGGTGAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTggg                                                                                                 <  1:685728/149‑1 (MQ=25)

                                               ccACACTACCATCGGCTCTACGGAGTTTCACTTCTGTGTTCGGCATGGGGTCAGTTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTggg                                                                                                 <  2:991617/149‑1 (MQ=255)

                                                            gtcgcTAAGGCGGTTCACTTCTGAGTACGGCAGGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTGTTTTCTAATCTGCCGAAATTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTa                                                                                    <  2:1022057/147‑1 (MQ=37)

                                                            ggCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTa                                                                                    <  2:499343/149‑1 (MQ=255)

                                                             gcgcTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTAc                                                                                   <  1:1427739/149‑1 (MQ=255)

                                                                  aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAgg                                                                              <  1:996643/149‑1 (MQ=255)

                                                                  aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAgg                                                                              <  1:213078/149‑1 (MQ=255)

                                                                  aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAgg                                                                              <  2:49672/149‑1 (MQ=255)

                                                                  aCGGCGTTTCACTTCTGAGTTCGGCATGGGGGCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAgg                                                                              <  1:244375/149‑1 (MQ=255)

                                                                   cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCTGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCAGCCTAACTTTAACCTAAAAAGTGGTGCTGATCCCCAGAGTCGAACTGGGGACCTCACCCTTACCTAggg                                                                             <  2:1532662/149‑1 (MQ=37)

                                                                       gtgtCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTGGTAAGGGTgag                                                                         <  2:739472/146‑3 (MQ=255)

                                                                       ggttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTGTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTgcg                                                                         <  1:1131245/147‑1 (MQ=255)

                                                                       gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCGAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTGGTAAGGGTgag                                                                         <  2:511774/149‑3 (MQ=255)

                                                                          tCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACACATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGCACTGGGGACCTCACCCTTACCAAGGGTGCGctc                                                                      <  2:399860/149‑1 (MQ=255)

                                                                           cACTTCTGAGTTGGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGctct                                                                     <  2:751343/149‑1 (MQ=255)

                                                                            aCTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTa                                                                    <  1:3302/149‑1 (MQ=255)

                                                                             catCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGTGACCTCACCCTTACCAAGGGTGCGCTCTAc                                                                   <  1:201358/147‑1 (MQ=255)

                                                                             cTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGCGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTAc                                                                   <  1:99377/149‑1 (MQ=255)

                                                                              ttCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAtcagaacgcagaagcggtctgataaaa                                                                                                                           <  1:99991‑M1/92‑28 (MQ=255)

                                                                                    gTTCGGCATGGTGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACATCACCCTTACCAAGGGTGCGCTCTACCAACTGa                                                            <  1:516659/149‑1 (MQ=255)

                                                                                     ttCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAg                                                           >  2:1276020/1‑149 (MQ=255)

                                                                                     ttCGGCATGGGGTCAGGGGGGACCACCGCGCTACTGCCGCCATACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAg                                                           <  2:665244/149‑1 (MQ=255)

                                                                                      tCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGc                                                          <  2:462083/149‑1 (MQ=255)

                                                                                      ggtgcctGGGGTCAGGTGGGACCACCGCGCTACTGCAGCCAGACATATTCTTTTCTATTCTGCCGAACTTTAACCTACAACGTGGTGCGGATACCCAGAGTCGAACTGGGGAGCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGc                                                          <  2:1478987/143‑1 (MQ=37)

                                                                                       cGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGcc                                                         <  2:64184/149‑1 (MQ=255)

                                                                                            tgggtgcAGGTGGGACCACCGCGCTACTTCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATc                                                    <  2:971654/143‑1 (MQ=255)

                                                                                            tGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGcc                                                         <  2:63824/144‑1 (MQ=255)

                                                                                            tGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGcc                                                         <  2:69571/144‑1 (MQ=255)

                                                                                            tGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGcc                                                         >  1:63824/1‑144 (MQ=255)

                                                                                            tGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGcc                                                         >  1:69571/1‑144 (MQ=255)

                                                                                             ggggTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCa                                                   <  2:597890/149‑1 (MQ=255)

                                                                                                         gACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAAtt                                       >  1:1485620/1‑149 (MQ=255)

                                                                                                           ccaccGCGCTACTGCCGCCAGACAAATTCTTTTATATACTACCGCTCTTTCGGCTATATTGTGGAGCTGTTACCCAGAGTCTCTCTGGGGAGCTGCCCATTACCATGGGTGCGCTATAGGAAATGCGGCATAGCAGATAGCTAAAtgtt                                     >  2:1363195/1‑146 (MQ=255)

                                                                                                            caccGCGGTACTGCCGCCAGACATATTCTTTTCTAATGTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAAGTGGGGACCTCACCCTTACCAAGGGTGAGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGa                                    <  2:470251/149‑1 (MQ=37)

                                                                                                            caccGCGCTCCTGCCGCCATCCAAATTATTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGa                                    <  2:290694/149‑1 (MQ=255)

                                                                                                             accGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATCTCAGCACGCTAAATTTGAt                                   <  1:143807/149‑1 (MQ=255)

                                                                                                             accGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGAt                                   <  1:926094/149‑1 (MQ=255)

                                                                                                                 cgcTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCt                               <  2:1265345/149‑1 (MQ=255)

                                                                                                                    tACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTgg                             >  2:1215411/1‑148 (MQ=255)

                                                                                                                    tACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTgg                             <  1:1215411/148‑1 (MQ=255)

                                                                                                                     aCTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCa                           <  1:427947/149‑1 (MQ=255)

                                                                                                                     aCTGCCGCCAGACAAATTCTTTTCTAATATGCCGAACTTTAACATAAAAAGTGGTGCTGAAACCCAGAGTAGATCTGGGGAGATCAACCTTTCCAAGGGTGCGCTCTACCAACTGCGCCATATCAGCACGGTAAATTTGATGGCGGGcc                           >  2:1156800/1‑148 (MQ=37)

                                                                                                                      cTGCCGCCAGACAAATTCTTTTCTAATCTGCCGACCTTTAACCTTAAAAGTGGTGCTGATACCCCGAGGCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCACTCCCAACTGAGCCATTTCAGAGAGCTAAATTTGATGGCTGGCAg                          >  2:128325/1‑149 (MQ=37)

                                                                                                                      cTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAg                          >  1:517035/1‑149 (MQ=255)

                                                                                                                         ccgccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCACCTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTc                       <  1:341038/149‑1 (MQ=255)

                                                                                                                         ccgccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTc                       >  1:77090/1‑149 (MQ=255)

                                                                                                                          cgccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTcc                      <  2:26225/149‑1 (MQ=255)

                                                                                                                              aGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTTATGCCTGGCAGTTCACTAc                  >  2:920702/1‑149 (MQ=255)

                                                                                                                              aGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCGCTACCAACTGCGCCATATCAGCACGCTAAATTTGAAGCCTGGCAGTTCCCTAc                  >  1:465078/1‑149 (MQ=255)

                                                                                                                                   aaTTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCg             <  1:832375/149‑1 (MQ=255)

                                                                                                                                    aTTCTTTTCTAATCTGCCGAACTTTACCCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGCCCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGc            >  2:895808/1‑149 (MQ=255)

                                                                                                                                         tttCTATTATGCCGAAATTAATCTTAACCAGTCTTTGTGCTACCCCGTGGCGATCTGCGCACCTCACACTTACCAATTGTGCGGTCTACCAAATGAGCCATATCCGCACGTTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg       <  2:598024/149‑1 (MQ=16)

                                                                                                                                          ttacatcagaacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtccgacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaac      <  2:770436‑M1/145‑145 (MQ=255)

                                                                                                                                          ttCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTTCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTACCTACTCTCGCATgggg      >  1:166794/1‑149 (MQ=255)

                                                                                                                                              atcagaacgcagaagcggtcttataaaacagaatttgcctcgctgcagtagcgcggtggtcccacctgaccccatgccgaactcacaagtgaaacgccgtagcgccgagggtagtgtggggtctccccatgcgagagtagggaactgcc  <  2:1195216‑M1/149‑149 (MQ=255)

                                                                                                                                              atcagaacgcagaagcggtctgataaaacagaaattgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggaagtgtggggactccccatgcgagagtagggaactgcc  >  2:907167‑M1/1‑1 (MQ=255)

TGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAC  >  NC_000913/3423412‑3423702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.